Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0689.Seq
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          27   0.85 
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          27   0.85 
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          27   0.85 
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           27   0.85 
AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    25   3.4  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    25   3.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.5  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   4.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.85
 Identities = 13/57 (22%), Positives = 25/57 (43%)
 Frame = +3

Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILK 701
           +SG+ + H V  Y+G  +  A+   D +  D      K   +R Y    + +  I++
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.85
 Identities = 13/57 (22%), Positives = 25/57 (43%)
 Frame = +3

Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILK 701
           +SG+ + H V  Y+G  +  A+   D +  D      K   +R Y    + +  I++
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.85
 Identities = 13/57 (22%), Positives = 25/57 (43%)
 Frame = +3

Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILK 701
           +SG+ + H V  Y+G  +  A+   D +  D      K   +R Y    + +  I++
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.85
 Identities = 13/57 (22%), Positives = 25/57 (43%)
 Frame = +3

Query: 531 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILK 701
           +SG+ + H V  Y+G  +  A+   D +  D      K   +R Y    + +  I++
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211


>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
           protein AgamOBP4 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 171 SMSKKGRISFSLIRSQIILVISSPRMST 88
           +M+KKG ISFS   +QI  ++  P M T
Sbjct: 83  TMTKKGEISFSKTMAQIEAML-PPEMKT 109


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
           protein protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 171 SMSKKGRISFSLIRSQIILVISSPRMST 88
           +M+KKG ISFS   +QI  ++  P M T
Sbjct: 83  TMTKKGEISFSKTMAQIEAML-PPEMKT 109


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 492  NKVSCFVLISMSMTSNDDGFV 430
            ++V+C  L+SM+M  N DG V
Sbjct: 1485 HRVACKRLVSMNMPLNSDGTV 1505


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 487 SQLLCIDQHEHDVQ**WV-CPTLLQVS 410
           ++++C+DQH   +   W+ C TL  +S
Sbjct: 302 ARVVCVDQHRPSIPSRWIACDTLHAIS 328


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,396
Number of Sequences: 2352
Number of extensions: 16460
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)