Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0689.Seq
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   168   4e-42
Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   149   3e-36
U41540-8|AAW30667.1|  571|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U41540-7|AAM54182.1|  930|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U41540-6|AAM54183.1|  934|Caenorhabditis elegans Hypothetical pr...    30   2.1  
X75331-1|CAA53080.1|  620|Caenorhabditis elegans acetylcholinest...    28   6.4  
U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal acetyl...    28   6.4  

>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  168 bits (408), Expect = 4e-42
 Identities = 76/88 (86%), Positives = 80/88 (90%)
 Frame = +1

Query: 253 EYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWD 432
           +YNV +KCATITPDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV  W 
Sbjct: 67  KYNVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNTWS 126

Query: 433 KPIIIGRHAHADQYKATDFVVPGAGILK 516
           KPIIIGRHAHADQYKATDFVVPGAG L+
Sbjct: 127 KPIIIGRHAHADQYKATDFVVPGAGKLE 154



 Score =  113 bits (271), Expect = 2e-25
 Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
 Frame = +3

Query: 495 PRCWYLEIIFKPESG-EAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPL 671
           P    LEI F    G + I+  V ++KG GV+L+M+NTD SI DFAH+SFK+AL RK+PL
Sbjct: 148 PGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYNTDDSIRDFAHASFKYALQRKFPL 207

Query: 672 YLSTKNTILKKYDGRFKDIFQDIYDREYKKRLR 770
           YLSTKNTILKKYDGRFKDIF +IY  EY+   +
Sbjct: 208 YLSTKNTILKKYDGRFKDIFAEIYP-EYEAEFK 239



 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 40/60 (66%), Positives = 52/60 (86%)
 Frame = +2

Query: 68  KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELNVYDLGMENRDKTDDQVTIDCAEA 247
           KI+ G +V++ GDEMTRIIWDLIKEKLILP++D+ ++ +DLG+E+RD TDDQVTID A A
Sbjct: 5   KIQGGDIVEMQGDEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANA 64


>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  149 bits (360), Expect = 3e-36
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = +1

Query: 253 EYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWD 432
           E++VGIKCATITPDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV GW 
Sbjct: 89  EHSVGIKCATITPDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVPGWT 148

Query: 433 KPIIIGRHAHADQYKATDFVVPGAGILK 516
           +PI IGRHA  DQYK TD V+P    L+
Sbjct: 149 QPITIGRHAFGDQYKCTDLVIPSGSTLQ 176



 Score =  107 bits (258), Expect = 7e-24
 Identities = 48/81 (59%), Positives = 64/81 (79%)
 Frame = +3

Query: 516 IIFKPESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTI 695
           ++ KP+  + + +V    K  GV LAM+NTD SI  FAHS F++AL +++PLYLSTKNTI
Sbjct: 178 LVNKPDGSKDVHNVYDFKKSGGVGLAMYNTDESIKGFAHSCFQYALMKQWPLYLSTKNTI 237

Query: 696 LKKYDGRFKDIFQDIYDREYK 758
           LKKYDGRFKDIFQDIY+++Y+
Sbjct: 238 LKKYDGRFKDIFQDIYEKKYE 258



 Score = 87.8 bits (208), Expect = 7e-18
 Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
 Frame = +2

Query: 68  KIKA-GPVVDILGDEMTRIIWDLIKEKLILPFLDIELNVYDLGMENRDKTDDQVTIDCAE 244
           KIK   PVVD+ GDEMTRIIW  IK KLILP+LD+++  YDLG+E RD+T+DQVTID A 
Sbjct: 26  KIKVDNPVVDLDGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAH 85

Query: 245 AI 250
           AI
Sbjct: 86  AI 87


>U41540-8|AAW30667.1|  571|Caenorhabditis elegans Hypothetical
           protein F35H12.2c protein.
          Length = 571

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 603 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 761
           TD   +DF  +   F+ +L RKY    STK  I K    R      ++Y+ EYK+
Sbjct: 266 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 320


>U41540-7|AAM54182.1|  930|Caenorhabditis elegans Hypothetical
           protein F35H12.2a protein.
          Length = 930

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 603 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 761
           TD   +DF  +   F+ +L RKY    STK  I K    R      ++Y+ EYK+
Sbjct: 625 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 679


>U41540-6|AAM54183.1|  934|Caenorhabditis elegans Hypothetical
           protein F35H12.2b protein.
          Length = 934

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 603 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 761
           TD   +DF  +   F+ +L RKY    STK  I K    R      ++Y+ EYK+
Sbjct: 629 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 683


>X75331-1|CAA53080.1|  620|Caenorhabditis elegans
           acetylcholinesterase protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -3

Query: 251 LWPQHNQL*LDHQSYH-DFPYPSRRHLIQCPRKEESAF 141
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


>U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal
           acetylcholinesterase protein1 protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -3

Query: 251 LWPQHNQL*LDHQSYH-DFPYPSRRHLIQCPRKEESAF 141
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,984,648
Number of Sequences: 27780
Number of extensions: 392146
Number of successful extensions: 1003
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)