Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0687.Seq
(773 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 23 2.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 3.2
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 3.2
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 4.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 7.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 7.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 7.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 7.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 7.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 7.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 7.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 7.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 7.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 7.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.6
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 9.6
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 23.4 bits (48), Expect = 2.4
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -2
Query: 538 YGVGDTISGVSTIPVVRPEAYSESTAWMATYMAGELKFSNMIWVIFSLLALGL 380
YG + +G++ + V+RPE +S + MAG + + V+ L+A GL
Sbjct: 31 YGTAKSGTGIAAMSVMRPELIMKSI--IPVVMAGIIAIYGL--VVAVLIAGGL 79
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 330 LRVAPEEHPVLLTEAPLNPKANREKM 407
LR+ P H V+ T +NP + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.0 bits (47), Expect = 3.2
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 691 LLDVTNDFPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQS-VTFVDGYGVGDT 521
++D+T S G+ V +L+ +VG A + E+G G + VT + + DT
Sbjct: 18 MVDLTQCLQESSTGQSVEFSPMELNALVGTPAAPNMPAEEGEGMAGVTGEEPFDTLDT 75
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 4.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 338 DTQLIVEGVVPDLLHVI 288
+ Q +V+ V PD+LH+I
Sbjct: 21 NNQTVVDKVPPDMLHLI 37
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPS 84
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPS 84
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPS 84
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPS 84
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPS 84
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPS 84
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 54 REYREYRETSRERSRDRRERGRSREHRIIPS 84
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPS 333
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPS 333
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPS 333
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPS 333
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPS 333
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPS 333
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 302 REYREYRETSRERSRDRRGRGRSREHRIIPS 332
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -1
Query: 755 REWKRQRWPSPARSRGRHSRASP*CHERFPS 663
RE++ R S RSR R R H PS
Sbjct: 303 REYREYRETSRERSRDRRERGRSREHRIIPS 333
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 247 TLNTPSSTVSSPTGMT 294
T+NTP+++V S +G T
Sbjct: 838 TINTPTTSVISMSGTT 853
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 94 GMCKAGFAGD 123
GMCK G +GD
Sbjct: 130 GMCKEGISGD 139
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,645
Number of Sequences: 438
Number of extensions: 4552
Number of successful extensions: 41
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -