Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0686.Seq
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   8.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 360  QKPHRPSHRAPSRT 319
            QKP +PS+R PS T
Sbjct: 1167 QKPTKPSYRPPSTT 1180


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 292 PPSTPWAGSRPRRSSMRWSVR 354
           PP  P  GS  +R+ + W V+
Sbjct: 38  PPREPTVGSEVKRTYIEWGVK 58


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 292 PPSTPWAGSRPRRSSMRWSVR 354
           PP  P  GS  +R+ + W V+
Sbjct: 38  PPREPTVGSEVKRTYIEWGVK 58


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 420 DEDDVVINAFKTFDEEGK 473
           D DDV I  F+T  E GK
Sbjct: 106 DPDDVFIRKFETSFESGK 123


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 334 SSFSDASLPRESKV 293
           +SFSD+S+P+  K+
Sbjct: 477 TSFSDSSIPKVKKI 490


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 334 SSFSDASLPRESKV 293
           +SFSD+S+P+  K+
Sbjct: 477 TSFSDSSIPKVKKI 490


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 334 SSFSDASLPRESKV 293
           +SFSD+S+P+  K+
Sbjct: 477 TSFSDSSIPKVKKI 490


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,070
Number of Sequences: 336
Number of extensions: 2074
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)