Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0684.Seq
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC142995-1|AAI42996.1| 594|Homo sapiens SET domain containing 3... 90 7e-18
AK026680-1|BAB15525.1| 512|Homo sapiens protein ( Homo sapiens ... 90 7e-18
BC066931-1|AAH66931.1| 292|Homo sapiens SETD3 protein protein. 85 3e-16
BC148251-1|AAI48252.1| 296|Homo sapiens SET domain containing 3... 83 8e-16
BC127625-1|AAI27626.1| 296|Homo sapiens SET domain containing 3... 83 8e-16
BC127624-1|AAI27625.1| 296|Homo sapiens SET domain containing 3... 83 8e-16
BC120968-1|AAI20969.1| 284|Homo sapiens SETD3 protein protein. 83 8e-16
BC120967-1|AAI20968.1| 296|Homo sapiens SET domain containing 3... 83 8e-16
BC009054-1|AAH09054.1| 214|Homo sapiens SETD3 protein protein. 83 8e-16
BC002898-1|AAH02898.1| 307|Homo sapiens SET domain containing 4... 36 0.21
BC036556-1|AAH36556.1| 416|Homo sapiens SET domain containing 4... 34 0.65
AK001660-1|BAA91819.1| 440|Homo sapiens protein ( Homo sapiens ... 34 0.65
BC006399-1|AAH06399.2| 396|Homo sapiens reticulon 4 interacting... 33 1.5
AY063761-1|AAL40856.1| 396|Homo sapiens NOGO-interacting mitoch... 33 1.5
AL390074-5|CAH72095.1| 396|Homo sapiens reticulon 4 interacting... 33 1.5
AK095207-1|BAC04499.1| 296|Homo sapiens protein ( Homo sapiens ... 33 1.5
>BC142995-1|AAI42996.1| 594|Homo sapiens SET domain containing 3
protein.
Length = 594
Score = 90.2 bits (214), Expect = 7e-18
Identities = 45/80 (56%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +3
Query: 21 YRSIARQYAYFYKKIHTLDIPVLKKLQEVFTFDSYRWAVSTVMTRQNNIRLSEAD-VT-A 194
Y++ ARQYAYFYK I T L++ FT++ YRWAVS+VMTRQN I + VT A
Sbjct: 210 YKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLA 269
Query: 195 FIPLWDMCNHEHGEIRTDYN 254
IPLWDMCNH +G I T YN
Sbjct: 270 LIPLWDMCNHTNGLITTGYN 289
Score = 80.6 bits (190), Expect = 6e-15
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +2
Query: 245 GLQHELNRGECYALRDFKTDEQIFIFYGARPNADLFLHNGFVYPNNQHDSLSVTLGISSG 424
G E +R EC AL+DF+ EQI+IFYG R NA+ +H+GF + NN HD + + LG+S
Sbjct: 287 GYNLEDDRCECVALQDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKS 346
Query: 425 DPLREIKMSLLTKLGLGCVAHYSL 496
D L +K +L + G+ + ++L
Sbjct: 347 DRLYAMKAEVLARAGIPTSSVFAL 370
Score = 38.7 bits (86), Expect = 0.023
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +1
Query: 463 ARAGL-RRALLSVQTTDP-IGPELLAFIRIFNMNQEELTKWXXXXXXXXXXXXXXXXXXX 636
ARAG+ ++ ++ T+P I +LLAF+R+F M +EEL +
Sbjct: 358 ARAGIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSKFP 417
Query: 637 XXXDIDRRAHTYLLTRCKLLLASYKKNDNEN 729
D + + T+L R LLL +YK E+
Sbjct: 418 VSWDNEVKLWTFLEDRASLLLKTYKTTIEED 448
>AK026680-1|BAB15525.1| 512|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23027 fis, clone LNG01826. ).
Length = 512
Score = 90.2 bits (214), Expect = 7e-18
Identities = 45/80 (56%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +3
Query: 21 YRSIARQYAYFYKKIHTLDIPVLKKLQEVFTFDSYRWAVSTVMTRQNNIRLSEAD-VT-A 194
Y++ ARQYAYFYK I T L++ FT++ YRWAVS+VMTRQN I + VT A
Sbjct: 128 YKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLA 187
Query: 195 FIPLWDMCNHEHGEIRTDYN 254
IPLWDMCNH +G I T YN
Sbjct: 188 LIPLWDMCNHTNGLITTGYN 207
Score = 80.6 bits (190), Expect = 6e-15
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +2
Query: 245 GLQHELNRGECYALRDFKTDEQIFIFYGARPNADLFLHNGFVYPNNQHDSLSVTLGISSG 424
G E +R EC AL+DF+ EQI+IFYG R NA+ +H+GF + NN HD + + LG+S
Sbjct: 205 GYNLEDDRCECVALQDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKS 264
Query: 425 DPLREIKMSLLTKLGLGCVAHYSL 496
D L +K +L + G+ + ++L
Sbjct: 265 DRLYAMKAEVLARAGIPTSSVFAL 288
Score = 38.7 bits (86), Expect = 0.023
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +1
Query: 463 ARAGL-RRALLSVQTTDP-IGPELLAFIRIFNMNQEELTKWXXXXXXXXXXXXXXXXXXX 636
ARAG+ ++ ++ T+P I +LLAF+R+F M +EEL +
Sbjct: 276 ARAGIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFP 335
Query: 637 XXXDIDRRAHTYLLTRCKLLLASYKKNDNEN 729
D + + T+L R LLL +YK E+
Sbjct: 336 VSWDNEVKLWTFLEDRASLLLKTYKTTIEED 366
>BC066931-1|AAH66931.1| 292|Homo sapiens SETD3 protein protein.
Length = 292
Score = 85.0 bits (201), Expect = 3e-16
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = +3
Query: 21 YRSIARQYAYFYKKIHTLDIPVLKKLQEVFTFDSYRWAVSTVMTRQNNIRLSEAD-VT-A 194
Y++ ARQYAYFYK I T L++ FT++ YRWAVS+VMTRQN I + VT A
Sbjct: 210 YKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLA 269
Query: 195 FIPLWDMCNHEHGEIRT 245
IPLWDMCNH +G + T
Sbjct: 270 LIPLWDMCNHTNGLVTT 286
>BC148251-1|AAI48252.1| 296|Homo sapiens SET domain containing 3
protein.
Length = 296
Score = 83.4 bits (197), Expect = 8e-16
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +3
Query: 21 YRSIARQYAYFYKKIHTLDIPVLKKLQEVFTFDSYRWAVSTVMTRQNNIRLSEAD-VT-A 194
Y++ ARQYAYFYK I T L++ FT++ YRWAVS+VMTRQN I + VT A
Sbjct: 210 YKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLA 269
Query: 195 FIPLWDMCNHEHG 233
IPLWDMCNH +G
Sbjct: 270 LIPLWDMCNHTNG 282
>BC127625-1|AAI27626.1| 296|Homo sapiens SET domain containing 3
protein.
Length = 296
Score = 83.4 bits (197), Expect = 8e-16
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +3
Query: 21 YRSIARQYAYFYKKIHTLDIPVLKKLQEVFTFDSYRWAVSTVMTRQNNIRLSEAD-VT-A 194
Y++ ARQYAYFYK I T L++ FT++ YRWAVS+VMTRQN I + VT A
Sbjct: 210 YKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLA 269
Query: 195 FIPLWDMCNHEHG 233
IPLWDMCNH +G
Sbjct: 270 LIPLWDMCNHTNG 282
>BC127624-1|AAI27625.1| 296|Homo sapiens SET domain containing 3
protein.
Length = 296
Score = 83.4 bits (197), Expect = 8e-16
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +3
Query: 21 YRSIARQYAYFYKKIHTLDIPVLKKLQEVFTFDSYRWAVSTVMTRQNNIRLSEAD-VT-A 194
Y++ ARQYAYFYK I T L++ FT++ YRWAVS+VMTRQN I + VT A
Sbjct: 210 YKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLA 269
Query: 195 FIPLWDMCNHEHG 233
IPLWDMCNH +G
Sbjct: 270 LIPLWDMCNHTNG 282
>BC120968-1|AAI20969.1| 284|Homo sapiens SETD3 protein protein.
Length = 284
Score = 83.4 bits (197), Expect = 8e-16
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +3
Query: 21 YRSIARQYAYFYKKIHTLDIPVLKKLQEVFTFDSYRWAVSTVMTRQNNIRLSEAD-VT-A 194
Y++ ARQYAYFYK I T L++ FT++ YRWAVS+VMTRQN I + VT A
Sbjct: 210 YKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLA 269
Query: 195 FIPLWDMCNHEHG 233
IPLWDMCNH +G
Sbjct: 270 LIPLWDMCNHTNG 282
>BC120967-1|AAI20968.1| 296|Homo sapiens SET domain containing 3
protein.
Length = 296
Score = 83.4 bits (197), Expect = 8e-16
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +3
Query: 21 YRSIARQYAYFYKKIHTLDIPVLKKLQEVFTFDSYRWAVSTVMTRQNNIRLSEAD-VT-A 194
Y++ ARQYAYFYK I T L++ FT++ YRWAVS+VMTRQN I + VT A
Sbjct: 210 YKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLA 269
Query: 195 FIPLWDMCNHEHG 233
IPLWDMCNH +G
Sbjct: 270 LIPLWDMCNHTNG 282
>BC009054-1|AAH09054.1| 214|Homo sapiens SETD3 protein protein.
Length = 214
Score = 83.4 bits (197), Expect = 8e-16
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +3
Query: 21 YRSIARQYAYFYKKIHTLDIPVLKKLQEVFTFDSYRWAVSTVMTRQNNIRLSEAD-VT-A 194
Y++ ARQYAYFYK I T L++ FT++ YRWAVS+VMTRQN I + VT A
Sbjct: 128 YKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLA 187
Query: 195 FIPLWDMCNHEHG 233
IPLWDMCNH +G
Sbjct: 188 LIPLWDMCNHTNG 200
>BC002898-1|AAH02898.1| 307|Homo sapiens SET domain containing 4
protein.
Length = 307
Score = 35.5 bits (78), Expect = 0.21
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 239 KNGLQHELNRGECYALRDFKTDEQIFIFYGARPNADLFLHNGFVYPNNQHDSLSVTLG 412
K E + E ++ E++FI YG N LFL GFV +N H + V+ G
Sbjct: 244 KAAFNEETHSYEIRTTSRWRKHEEVFICYGPHDNQRLFLEYGFVSVHNPHACVYVSRG 301
>BC036556-1|AAH36556.1| 416|Homo sapiens SET domain containing 4
protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.65
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 239 KNGLQHELNRGECYALRDFKTDEQIFIFYGARPNADLFLHNGFVYPNNQHDSLSVT 406
K E + E ++ E++FI YG N LFL GFV +N H + V+
Sbjct: 220 KAAFNEETHSYEIRTTSRWRKHEEVFICYGPHDNQRLFLEYGFVSVHNPHACVYVS 275
>AK001660-1|BAA91819.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ10798 fis, clone NT2RP4000704. ).
Length = 440
Score = 33.9 bits (74), Expect = 0.65
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 239 KNGLQHELNRGECYALRDFKTDEQIFIFYGARPNADLFLHNGFVYPNNQHDSLSVT 406
K E + E ++ E++FI YG N LFL GFV +N H + V+
Sbjct: 244 KAAFNEETHSYEIRTTSRWRKHEEVFICYGPHDNQRLFLEYGFVSVHNPHACVYVS 299
>BC006399-1|AAH06399.2| 396|Homo sapiens reticulon 4 interacting
protein 1 protein.
Length = 396
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 471 WAASRTTLCSNDRSNRTRTIGVYKDLQYESGGTNEMVQS 587
W A T +CS D S R +G + Y+SG E ++S
Sbjct: 228 WDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKS 266
>AY063761-1|AAL40856.1| 396|Homo sapiens NOGO-interacting
mitochondrial protein protein.
Length = 396
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 471 WAASRTTLCSNDRSNRTRTIGVYKDLQYESGGTNEMVQS 587
W A T +CS D S R +G + Y+SG E ++S
Sbjct: 228 WDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKS 266
>AL390074-5|CAH72095.1| 396|Homo sapiens reticulon 4 interacting
protein 1 protein.
Length = 396
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 471 WAASRTTLCSNDRSNRTRTIGVYKDLQYESGGTNEMVQS 587
W A T +CS D S R +G + Y+SG E ++S
Sbjct: 228 WDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKS 266
>AK095207-1|BAC04499.1| 296|Homo sapiens protein ( Homo sapiens
cDNA FLJ37888 fis, clone BRTHA2000474. ).
Length = 296
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 471 WAASRTTLCSNDRSNRTRTIGVYKDLQYESGGTNEMVQS 587
W A T +CS D S R +G + Y+SG E ++S
Sbjct: 128 WDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKS 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,531,817
Number of Sequences: 237096
Number of extensions: 2074943
Number of successful extensions: 7880
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7862
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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