Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0684.Seq
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003482-1|AAO39485.1|  537|Drosophila melanogaster RE55639p pro...    67   3e-11
AE014298-978|AAF46222.2|  537|Drosophila melanogaster CG32732-PA...    67   3e-11
AE014296-304|AAS64931.1|  446|Drosophila melanogaster CG33230-PA...    36   0.082

>BT003482-1|AAO39485.1|  537|Drosophila melanogaster RE55639p
           protein.
          Length = 537

 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 31/67 (46%), Positives = 41/67 (61%)
 Frame = +2

Query: 272 ECYALRDFKTDEQIFIFYGARPNADLFLHNGFVYPNNQHDSLSVTLGISSGDPLREIKMS 451
           EC A     T EQ FI+YG R N DL +HNGFV PNN  D +++ +G+S  D L   + S
Sbjct: 346 ECTAQEAVNTGEQFFIYYGDRSNTDLLVHNGFVDPNNTKDYVNIRVGLSLTDALAAKRAS 405

Query: 452 LLTKLGL 472
           +L KL +
Sbjct: 406 ILDKLNI 412



 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
 Frame = +3

Query: 9   SLKLYRSIARQYAYFYKKIHTLDIPV-----------LKKLQEVFTFDSYRWAVSTVMTR 155
           +++  R IA+QYA+ YK  HT+  P            L   Q    +  YRWAVSTVMTR
Sbjct: 240 AMRQCRVIAKQYAFLYKYAHTMTEPSTGNRSHPGERGLFFTQHGLCYKLYRWAVSTVMTR 299

Query: 156 QNNIRLSEAD-------VTAFIPLWDMCNHEHGEIRTDYNT 257
           QN +   + +       ++A IP WDM NH  G+I + Y T
Sbjct: 300 QNLVPSEKQESEDGPKLISALIPYWDMANHRPGKITSFYAT 340



 Score = 35.9 bits (79), Expect = 0.062
 Identities = 24/73 (32%), Positives = 32/73 (43%)
 Frame = +1

Query: 508 DPIGPELLAFIRIFNMNQEELTKWXXXXXXXXXXXXXXXXXXXXXXDIDRRAHTYLLTRC 687
           D I  ELLAF+R+F M+ E+L  W                      D + R   +L  R 
Sbjct: 425 DFISKELLAFVRVFKMSAEQLDHW---CSDLDRAGDLLHIDCALETDHETRTWQFLEDRL 481

Query: 688 KLLLASYKKNDNE 726
           KLLLA + K  +E
Sbjct: 482 KLLLAVFNKEMHE 494


>AE014298-978|AAF46222.2|  537|Drosophila melanogaster CG32732-PA
           protein.
          Length = 537

 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 31/67 (46%), Positives = 41/67 (61%)
 Frame = +2

Query: 272 ECYALRDFKTDEQIFIFYGARPNADLFLHNGFVYPNNQHDSLSVTLGISSGDPLREIKMS 451
           EC A     T EQ FI+YG R N DL +HNGFV PNN  D +++ +G+S  D L   + S
Sbjct: 346 ECTAQEAVNTGEQFFIYYGDRSNTDLLVHNGFVDPNNTKDYVNIRVGLSLTDALAAKRAS 405

Query: 452 LLTKLGL 472
           +L KL +
Sbjct: 406 ILDKLNI 412



 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
 Frame = +3

Query: 9   SLKLYRSIARQYAYFYKKIHTLDIPV-----------LKKLQEVFTFDSYRWAVSTVMTR 155
           +++  R IA+QYA+ YK  HT+  P            L   Q    +  YRWAVSTVMTR
Sbjct: 240 AMRQCRVIAKQYAFLYKYAHTMTEPSTGNRSHPGERGLFFTQHGLCYKLYRWAVSTVMTR 299

Query: 156 QNNIRLSEAD-------VTAFIPLWDMCNHEHGEIRTDYNT 257
           QN +   + +       ++A IP WDM NH  G+I + Y T
Sbjct: 300 QNLVPSEKQESEDGPKLISALIPYWDMANHRPGKITSFYAT 340



 Score = 35.9 bits (79), Expect = 0.062
 Identities = 24/73 (32%), Positives = 32/73 (43%)
 Frame = +1

Query: 508 DPIGPELLAFIRIFNMNQEELTKWXXXXXXXXXXXXXXXXXXXXXXDIDRRAHTYLLTRC 687
           D I  ELLAF+R+F M+ E+L  W                      D + R   +L  R 
Sbjct: 425 DFISKELLAFVRVFKMSAEQLDHW---CSDLDRAGDLLHIDCALETDHETRTWQFLEDRL 481

Query: 688 KLLLASYKKNDNE 726
           KLLLA + K  +E
Sbjct: 482 KLLLAVFNKEMHE 494


>AE014296-304|AAS64931.1|  446|Drosophila melanogaster CG33230-PA
           protein.
          Length = 446

 Score = 35.5 bits (78), Expect = 0.082
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 296 KTDEQIFIFYGARPNADLFLHNGFVYPNNQHDSLSVTL 409
           K  +Q+FI YGA PN  L    GF    N+HD   V+L
Sbjct: 274 KPYDQLFISYGALPNFKLLTEYGFWLRENKHDYFEVSL 311


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,390,134
Number of Sequences: 53049
Number of extensions: 661555
Number of successful extensions: 1646
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)