Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0681.Seq
(691 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 134 9e-33
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 81 1e-16
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 75 1e-14
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 72 9e-14
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 58 1e-09
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 54 2e-08
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 46 5e-06
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 36 0.006
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 36 0.007
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 33 0.051
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 32 0.090
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.16
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.48
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 28 1.1
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 28 1.5
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 2.6
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 27 2.6
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 3.4
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 3.4
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 3.4
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 26 4.5
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 5.9
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 5.9
SPBC119.06 |sco1||copper chaperone Sco1|Schizosaccharomyces pomb... 25 7.8
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 134 bits (325), Expect = 9e-33
Identities = 60/85 (70%), Positives = 75/85 (88%)
Frame = +2
Query: 254 NFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 433
+F EFLTMMARKMKDTD+EEE+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+ EEV +
Sbjct: 66 DFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVAD 125
Query: 434 MIREADIDGDGQVNYEEFVTMMTSK 508
MIREAD DGDG +NYEEF +++SK
Sbjct: 126 MIREADTDGDGVINYEEFSRVISSK 150
Score = 109 bits (261), Expect = 5e-25
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +3
Query: 75 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 254
LT+EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADGNGTI
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 255 TF 260
F
Sbjct: 66 DF 67
Score = 68.5 bits (160), Expect = 8e-13
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +2
Query: 275 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 454
M R + D + E REAF +FD+D +G I++ EL VM +LG+ T E+ +MI E D
Sbjct: 1 MTTRNLTD-EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDA 59
Query: 455 DGDGQVNYEEFVTMMTSK 508
DG+G +++ EF+TMM K
Sbjct: 60 DGNGTIDFTEFLTMMARK 77
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +3
Query: 63 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 242
M D EE++ +EAF +FDKDG+G IT +EL V+ SLG+ ++ E+ DMI E D DG
Sbjct: 78 MKDTDNEEEV---REAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDG 134
Query: 243 NGTITF 260
+G I +
Sbjct: 135 DGVINY 140
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 93 AEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTIT 257
AE ++ + D DG+GTI E T+M R + E E+++ D DGNG IT
Sbjct: 48 AELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYIT 103
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 81.4 bits (192), Expect = 1e-16
Identities = 36/82 (43%), Positives = 56/82 (68%)
Frame = +2
Query: 263 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 442
+F++ ++ K+++T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV M++
Sbjct: 62 KFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQ 121
Query: 443 EADIDGDGQVNYEEFVTMMTSK 508
EAD G +Y +FV + +K
Sbjct: 122 EADPTNSGSFDYYDFVQRIMAK 143
Score = 56.0 bits (129), Expect = 5e-09
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +3
Query: 78 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 230
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL 54
Score = 46.4 bits (105), Expect = 4e-06
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 57 STMADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 233
S ++++L E E E+ +AF +FDKD G I T + M++LG+ ++ E+Q M+ E D
Sbjct: 65 SFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEAD 124
Query: 234 ADGNGTITF 260
+G+ +
Sbjct: 125 PTNSGSFDY 133
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/69 (27%), Positives = 43/69 (62%)
Frame = +2
Query: 302 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 481
+ +E++EAF ++D D +G I + + V+ +LG +TD E+ ++ E GD ++ +
Sbjct: 6 EQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL---GDA-IDEK 61
Query: 482 EFVTMMTSK 508
+F++ +++K
Sbjct: 62 KFMSFVSNK 70
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 74.5 bits (175), Expect = 1e-14
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +2
Query: 263 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 442
+F+ +M K+ + D EEI+ AF +FD D G IS LR V L E + D+E++ MI
Sbjct: 94 DFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIE 153
Query: 443 EADIDGDGQVNYEEFVTMM 499
E D+D DG++N +EF+ +M
Sbjct: 154 EFDLDQDGEINEQEFIAIM 172
Score = 52.0 bits (119), Expect = 8e-08
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 302 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 481
+ ++I EAF++FD D + I ELR M LG EV +++R+ D G G + E
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 482 EFVTMMTSK 508
+FV +MT K
Sbjct: 94 DFVRVMTEK 102
Score = 51.2 bits (117), Expect = 1e-07
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +3
Query: 72 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 248
++TEEQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKG 88
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 71.7 bits (168), Expect = 9e-14
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +2
Query: 311 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 490
EE + F+VFDKD G I ELR+V+T+LGEKL++EE+DE+++ + DG VNY +FV
Sbjct: 77 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFV 135
Query: 491 TMM 499
M+
Sbjct: 136 QMI 138
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +3
Query: 99 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 239
+K+AFSLFD+ G G I +G ++R+ GQNPT AE+ ++ + + A+
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE 54
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 96 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 230
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 122
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +2
Query: 320 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 499
++AF +FD+ G G I + ++ G+ T E+ E+ E+ + +V+ E+F+ ++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI--ESTL--PAEVDMEQFLQVL 64
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 58.0 bits (134), Expect = 1e-09
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Frame = +2
Query: 254 NFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTD 418
+F EF+ ++ + EE+++ AF+++D D +G+IS EL V+ TNL E
Sbjct: 74 DFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQ 133
Query: 419 EEVDEMIREADIDGDGQVNYEEFVTMMTSKEPPASVCVKS 538
+ VD+ I E D D DG++++EEF +++ +S+ + S
Sbjct: 134 QIVDKTIMEVDKDRDGKISFEEFKDIVSGSNVTSSMTLDS 173
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +3
Query: 72 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 233
QLT QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E + M ++
Sbjct: 41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESIN 94
Score = 43.2 bits (97), Expect = 4e-05
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 254 NFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 433
N FLT M + ++ EAF FD +G I + +R ++++G+++ +EV+
Sbjct: 98 NLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVES 157
Query: 434 MIREADIDGDGQVNYEEFV 490
++R G YE+FV
Sbjct: 158 ILR--SYTSHGVFYYEKFV 174
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = +2
Query: 311 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 490
+E++EAF + DKDG+G I +++ ++T+L + +++ ++ M + +N F+
Sbjct: 48 QELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESI----NPPINLAAFL 103
Query: 491 TMMTS 505
T M S
Sbjct: 104 TAMGS 108
Score = 29.9 bits (64), Expect = 0.36
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 362 ISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVTMMTSKEPPAS 523
++A + + +LT ++ E+ +EA D DGDG + E+ TM+TS AS
Sbjct: 26 VAAQAAKRASSGAFAQLTSSQIQEL-KEAFALLDKDGDGNIGREDVKTMLTSLNQDAS 82
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +3
Query: 105 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 242
EAFS FD G I + + S+G E++ ++ + G
Sbjct: 121 EAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSYTSHG 166
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 278 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 457
M+ K + +EE EAF +FD G+I +LR LGE LT E++ M+ D+
Sbjct: 1 MSVSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLA 57
Query: 458 G-DGQVNYEEFVTM 496
G +G+V+ EEF +
Sbjct: 58 GTNGKVSREEFAEL 71
Score = 33.5 bits (73), Expect = 0.029
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 84 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 242
E E +EAF LFD G I ++L LG+N T+ +LQ M++ +G
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGTNG 61
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 35.9 bits (79), Expect = 0.006
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +2
Query: 278 MARKMKDTDSEE--EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 451
+ +K + +EE + + F D DG G++ + +K + +EV E IRE +
Sbjct: 6 LQKKYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVN 64
Query: 452 IDGDGQVNYEEFV 490
+D G+V E+FV
Sbjct: 65 VDSSGRVEPEDFV 77
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 35.5 bits (78), Expect = 0.007
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +2
Query: 296 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 475
D + + E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +
Sbjct: 2 DPQEKNKYWEIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFD 58
Query: 476 YEEFVTMM 499
++EF M
Sbjct: 59 FDEFAIAM 66
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 32.7 bits (71), Expect = 0.051
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +2
Query: 332 RVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSKE 511
R+ D G IS A ++ ++ + +++ D + IR ++G + EE T+M S
Sbjct: 315 RLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHI-VEGADMTSVEERQTLMFSAT 373
Query: 512 PPASVCVKSREFKYTFCFMT 571
P + + +R+F + F++
Sbjct: 374 FPRDIQLLARDFLKDYVFLS 393
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 31.9 bits (69), Expect = 0.090
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +2
Query: 248 HDNFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 427
H N EF + + D F VFD D NG+I E ++ ++++
Sbjct: 42 HLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKL 101
Query: 428 DEMIREADIDGDGQVNYEEFVTMM 499
+ D+D +G ++Y+E + ++
Sbjct: 102 IWAFQLYDLDNNGLISYDEMLRIV 125
Score = 30.7 bits (66), Expect = 0.21
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Frame = +2
Query: 254 NFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE------KLT 415
+F EF+ ++ + + +++ AF+++D D NG IS E+ ++ + + KL
Sbjct: 81 DFKEFICALSVTSRG-ELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLP 139
Query: 416 DEE------VDEMIREADIDGDGQVNYEEFVTMMTSKEPPASVCVKS 538
++E V+++ D + DGQ+ EEF SK P V S
Sbjct: 140 EDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCE--GSKRDPTIVSALS 184
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -1
Query: 463 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 329
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.48
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 463 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 317
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 69 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 230
D+ E A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 538 DETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = +3
Query: 24 FFSVAPDNPS*STMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 203
FF++ D + A++ T + F E+F + D + SL + T
Sbjct: 845 FFTIKADESAAQATANRETHGRQKLF-ESFGVLDSSNSVADSDSTNYDDENSLNRGGTSE 903
Query: 204 ELQDMINEVDADGNGTITFPSS 269
+ I +VD +G+I FP S
Sbjct: 904 SDSEFIWDVDESNSGSIVFPKS 925
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 386 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 484
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 281 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 457
AR++K I + ++ D+ + +A EL V LG+ +TD VDE +A+++
Sbjct: 113 ARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEV---LGQNMTDINVDEEELDAELE 168
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 338 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 451
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 213 LEVRLLWGSVLATSSRCPALWS*WCHR 133
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 338 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 451
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 594 SNTMLILCVMKQNVYLNSLLFTHTLAGGSF 505
S T+L + +M QN +LN+ F H A +F
Sbjct: 199 SQTVLEILLMNQNSFLNNFNFEHIKADFAF 228
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = +3
Query: 105 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTITF 260
+ F FD+D DG + +EL + R P N + +G +T+
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFRHTPGLPEIWVSSQFPNSTVLNEHGYVTY 362
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 475 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 374
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPBC119.06 |sco1||copper chaperone Sco1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 263
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 419 EEVDEMIREADIDGD--GQVNYEEFVTMMTSKEPPASVCVKSREFKYTFCFMTHNISIVL 592
+E+D+M DI + G V Y F+T +++PP + +F +T + +
Sbjct: 136 DELDKMSAAIDIVNNVVGDVVYPIFITCDPARDPPQEMAEYLEDFNPKIVGLTGSYEEIK 195
Query: 593 DL 598
D+
Sbjct: 196 DI 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,259,956
Number of Sequences: 5004
Number of extensions: 40167
Number of successful extensions: 184
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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