Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0680.Seq
(724 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 43 3e-06
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 43 3e-06
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 25 0.47
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 2.5
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 2.5
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 2.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.3
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.3
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.3
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.3
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.3
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 3.3
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.3
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 22 4.4
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 22 5.8
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 22 5.8
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 22 5.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 42.7 bits (96), Expect = 3e-06
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -3
Query: 503 LGPTLSVPMMMFAGFGVTLRDLPPYLYWGSYVSYLRYG 390
+GP L +P ++F GF + + +P Y W S++S+ RYG
Sbjct: 560 IGPPLVIPFLLFGGFFLNVSSIPIYFKWLSFLSWFRYG 597
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 42.7 bits (96), Expect = 3e-06
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -3
Query: 503 LGPTLSVPMMMFAGFGVTLRDLPPYLYWGSYVSYLRYG 390
+GP L +P ++F GF + + +P Y W S++S+ RYG
Sbjct: 560 IGPPLVIPFLLFGGFFLNVSSIPIYFKWLSFLSWFRYG 597
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 25.4 bits (53), Expect = 0.47
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 528 SSMLLTVLPWPYFVGTDDDVRGLRSD-STRPPAVLVLG 418
SS ++T+L W GTD + + +D +P +LV G
Sbjct: 213 SSHVITILDWTKEDGTDKFMSHIHNDGDNKPDTILVNG 250
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 497 GQGRTVNNIEDGSDHE 544
GQG + NN ED D E
Sbjct: 189 GQGSSTNNDEDDDDEE 204
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 497 GQGRTVNNIEDGSDHE 544
GQG + NN ED D E
Sbjct: 189 GQGSSTNNDEDDDDEE 204
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 497 GQGRTVNNIEDGSDHE 544
GQG + NN ED D E
Sbjct: 189 GQGSSTNNDEDDDDEE 204
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 386 PIRTASTRRMTPSTSTAGGRVESLRSPRTSSSVPTK*GQGRTVNNIEDG 532
P+ +++ P+TSTA + S S +S+S K G NN + G
Sbjct: 146 PLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEK--AGTNNNNSKSG 192
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 386 PIRTASTRRMTPSTSTAGGRVESLRSPRTSSSVPTK*GQGRTVNNIEDG 532
P+ +++ P+TSTA + S S +S+S K G NN + G
Sbjct: 146 PLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEK--AGTNNNNSKSG 192
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 386 PIRTASTRRMTPSTSTAGGRVESLRSPRTSSSVPTK*GQGRTVNNIEDG 532
P+ +++ P+TSTA + S S +S+S K G NN + G
Sbjct: 146 PLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEK--AGTNNNNSKSG 192
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 386 PIRTASTRRMTPSTSTAGGRVESLRSPRTSSSVPTK*GQGRTVNNIEDG 532
P+ +++ P+TSTA + S S +S+S K G NN + G
Sbjct: 146 PLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEK--AGTNNNNSKSG 192
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 386 PIRTASTRRMTPSTSTAGGRVESLRSPRTSSSVPTK*GQGRTVNNIEDG 532
P+ +++ P+TSTA + S S +S+S K G NN + G
Sbjct: 102 PLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEK--AGTNNNNSKSG 148
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 386 PIRTASTRRMTPSTSTAGGRVESLRSPRTSSSVPTK*GQGRTVNNIEDG 532
P+ +++ P+TSTA + S S +S+S K G NN + G
Sbjct: 146 PLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEK--AGTNNNNSKSG 192
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 386 PIRTASTRRMTPSTSTAGGRVESLRSPRTSSSVPTK*GQGRTVNNIEDG 532
P+ +++ P+TSTA + S S +S+S K G NN + G
Sbjct: 146 PLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEK--AGTNNNNSKSG 192
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 522 LKTAPIMRPKLCATSTVYREIAKNI 596
+KT+P MR +L + VYR + + I
Sbjct: 602 IKTSPKMRHELQKLAQVYRILGETI 626
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 119 PTIILSIYKWLEQIRCLYRTAFNFHFRRKKA 211
P++ + +WLE+ L FNF + +KA
Sbjct: 20 PSLTDLVQRWLERTPGLELEGFNFWGKYQKA 50
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 119 PTIILSIYKWLEQIRCLYRTAFNFHFRRKKA 211
P++ + +WLE+ L FNF + +KA
Sbjct: 180 PSLTDLVQRWLERTPGLELEGFNFWGKYQKA 210
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 119 PTIILSIYKWLEQIRCLYRTAFNFHFRRKKA 211
P++ + +WLE+ L FNF + +KA
Sbjct: 180 PSLTDLVQRWLERTPGLELEGFNFWGKYQKA 210
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.6
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -1
Query: 625 GQPMAISRFGMFFAISLYTVLVAQSFGLMIGAVFNVVNGPSLALL 491
G P AI M + + L Q F ++ + +++ PS+ LL
Sbjct: 1001 GSPSAIFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYLL 1045
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.6
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -1
Query: 625 GQPMAISRFGMFFAISLYTVLVAQSFGLMIGAVFNVVNGPSLALL 491
G P AI M + + L Q F ++ + +++ PS+ LL
Sbjct: 1001 GSPSAIFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYLL 1045
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.6
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -1
Query: 625 GQPMAISRFGMFFAISLYTVLVAQSFGLMIGAVFNVVNGPSLALL 491
G P AI M + + L Q F ++ + +++ PS+ LL
Sbjct: 1001 GSPSAIFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYLL 1045
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.6
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -1
Query: 625 GQPMAISRFGMFFAISLYTVLVAQSFGLMIGAVFNVVNGPSLALL 491
G P AI M + + L Q F ++ + +++ PS+ LL
Sbjct: 1001 GSPSAIFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYLL 1045
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,300
Number of Sequences: 336
Number of extensions: 3512
Number of successful extensions: 26
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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