Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0680.Seq
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g01320.4 68415.m00049 ABC transporter family protein 50 2e-06
At2g01320.3 68415.m00047 ABC transporter family protein 50 2e-06
At2g01320.2 68415.m00046 ABC transporter family protein 50 2e-06
At2g01320.1 68415.m00048 ABC transporter family protein 50 2e-06
At1g31770.1 68414.m03899 ABC transporter family protein contains... 49 3e-06
At3g52310.1 68416.m05749 ABC transporter family protein contains... 44 1e-04
At5g06530.2 68418.m00737 ABC transporter family protein 43 2e-04
At5g06530.1 68418.m00736 ABC transporter family protein 43 2e-04
At4g27420.1 68417.m03941 ABC transporter family protein D.melano... 42 4e-04
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 37 0.012
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 37 0.012
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 37 0.016
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 33 0.14
At1g71960.1 68414.m08318 ABC transporter family protein similar ... 33 0.14
At2g36380.1 68415.m04464 ABC transporter family protein related ... 33 0.25
At1g66950.1 68414.m07612 ABC transporter family protein similar ... 33 0.25
At1g54430.1 68414.m06209 hypothetical protein 33 0.25
At3g53510.1 68416.m05908 ABC transporter family protein breast c... 32 0.44
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 31 0.58
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 31 0.77
At2g37360.1 68415.m04582 ABC transporter family protein 31 0.77
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 31 0.77
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 30 1.4
At2g38290.2 68415.m04703 ammonium transporter 2 (AMT2) identical... 30 1.4
At2g38290.1 68415.m04704 ammonium transporter 2 (AMT2) identical... 30 1.4
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 30 1.4
At2g13610.1 68415.m01500 ABC transporter family protein 30 1.8
At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger) fa... 29 2.4
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 29 3.1
At2g39350.1 68415.m04830 ABC transporter family protein 29 4.1
At5g13580.1 68418.m01570 ABC transporter family protein 28 5.5
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 28 5.5
At3g21090.1 68416.m02666 ABC transporter family protein similar ... 28 5.5
At3g13220.1 68416.m01654 ABC transporter family protein contains... 28 5.5
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 28 5.5
At3g55090.1 68416.m06118 ABC transporter family protein ATP-bind... 28 7.2
At1g51460.1 68414.m05792 ABC transporter family protein similar ... 28 7.2
At5g04770.1 68418.m00492 amino acid permease family protein simi... 27 9.5
At4g25640.1 68417.m03692 MATE efflux family protein similar to r... 27 9.5
At4g15233.1 68417.m02334 ABC transporter family protein similar ... 27 9.5
>At2g01320.4 68415.m00049 ABC transporter family protein
Length = 725
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YSLG Y +S TI ++PI +F A++Y M+ +SRFG F I A + G
Sbjct: 482 YSLGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAASAMG 541
Query: 544 LMIGAV 527
L +GA+
Sbjct: 542 LTVGAM 547
>At2g01320.3 68415.m00047 ABC transporter family protein
Length = 728
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YSLG Y +S TI ++PI +F A++Y M+ +SRFG F I A + G
Sbjct: 482 YSLGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAASAMG 541
Query: 544 LMIGAV 527
L +GA+
Sbjct: 542 LTVGAM 547
>At2g01320.2 68415.m00046 ABC transporter family protein
Length = 727
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YSLG Y +S TI ++PI +F A++Y M+ +SRFG F I A + G
Sbjct: 482 YSLGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAASAMG 541
Query: 544 LMIGAV 527
L +GA+
Sbjct: 542 LTVGAM 547
>At2g01320.1 68415.m00048 ABC transporter family protein
Length = 725
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YSLG Y +S TI ++PI +F A++Y M+ +SRFG F I A + G
Sbjct: 482 YSLGPYLLSKTIAEIPIGAAFPLMFGAVLYPMARLNPTLSRFGKFCGIVTVESFAASAMG 541
Query: 544 LMIGAV 527
L +GA+
Sbjct: 542 LTVGAM 547
>At1g31770.1 68414.m03899 ABC transporter family protein contains
Pfam profile: PF00005: ABC transporter
Length = 648
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
Y L SY+++ + DLP+ + F I+Y M G + F + + LY+VLVAQ G
Sbjct: 471 YRLSSYFMARNVGDLPLELALPTAFVFIIYWMGGLKPDPTTFILSLLVVLYSVLVAQGLG 530
Query: 544 LMIGA-VFNVVNGPSLA 497
L GA + N+ +LA
Sbjct: 531 LAFGALLMNIKQATTLA 547
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = -3
Query: 479 MMMFAGFGVTLRDLPPYLYWGSYVSYLRYGLEGFVGAIYGLERPKLDCNEAPIC 318
+ + AG G ++ +PP++ W Y+SY Y + +G Y + +C++ C
Sbjct: 553 VFLIAG-GYYVQQIPPFIVWLKYLSYSYYCYKLLLGIQY-TDDDYYECSKGVWC 604
>At3g52310.1 68416.m05749 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter
Length = 737
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
Y L +Y+++ T DLP+ ++ +F +VY M+G + F + ++ AQ G
Sbjct: 572 YRLSAYFVARTTSDLPLDLILPVLFLVVVYFMAGLRLRAESFFLSVLTVFLCIVAAQGLG 631
Query: 544 LMIGA 530
L IGA
Sbjct: 632 LAIGA 636
>At5g06530.2 68418.m00737 ABC transporter family protein
Length = 691
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
Y L +Y+++ T DLP+ + ++F +VY M+G ++ F + ++ AQ G
Sbjct: 588 YRLSAYFLARTTSDLPLDFILPSLFLLVVYFMTGLRISPYPFFLSMLTVFLCIIAAQGLG 647
Query: 544 LMIGAV 527
L IGA+
Sbjct: 648 LAIGAI 653
>At5g06530.1 68418.m00736 ABC transporter family protein
Length = 751
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
Y L +Y+++ T DLP+ + ++F +VY M+G ++ F + ++ AQ G
Sbjct: 588 YRLSAYFLARTTSDLPLDFILPSLFLLVVYFMTGLRISPYPFFLSMLTVFLCIIAAQGLG 647
Query: 544 LMIGAV 527
L IGA+
Sbjct: 648 LAIGAI 653
>At4g27420.1 68417.m03941 ABC transporter family protein
D.melanogaster P element CaSpeR-1 gene (white
protein),PID:g870996
Length = 639
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
Y L Y++S + DLP+ ++ F I Y M+G ++ F + + L VLV+ G
Sbjct: 457 YRLSPYFLSRVVGDLPMELILPTCFLVITYWMAGLNHNLANFFVTLLVLLVHVLVSGGLG 516
Query: 544 LMIGAV 527
L +GA+
Sbjct: 517 LALGAL 522
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YS Y S I+++P T+ ++ IVY M G S+F + + ++L + G
Sbjct: 1227 YSALPYAFSQVIIEIPYTMAQACIYGVIVYGMIGYEWTASKFFLNIFFTFISILYSIYTG 1286
Query: 544 LMIGAV 527
+M+ +V
Sbjct: 1287 IMVISV 1292
Score = 32.3 bits (70), Expect = 0.33
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = -3
Query: 509 SFLGPTLSVPMMMFAGFGVTLRDLPPYLYWGSYVSYLRYGLEGFVGAIYGLERPKLDCNE 330
S L +S +F+GF + + +L W +YV +GL G A YG +LD E
Sbjct: 1300 SILNGVISTSWNVFSGFTIPRPRMHVWLRWFTYVCPGWWGLYGLTIAQYGDVETRLDTGE 1359
Query: 329 API----CLYKYPRQFLSEVAMS 273
+ Y Y FL V+++
Sbjct: 1360 TVVEFMKNYYGYEYNFLWVVSLT 1382
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YS Y IS +LP ++ +S I+Y+M G S+F F I+ ++ L +G
Sbjct: 1258 YSAIPYAISQVTCELPYVLIQTTYYSLIIYSMVGFEWKASKFLWFIFINYFSFLYWTYYG 1317
Query: 544 LM 539
+M
Sbjct: 1318 MM 1319
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YS Y IS +LP ++ +S IVY M G +F F +S ++ L +G
Sbjct: 1285 YSAMPYAISQVTCELPYVLIQTVYYSLIVYAMVGFEWKAEKFFWFVFVSYFSFLYWTYYG 1344
Query: 544 LM 539
+M
Sbjct: 1345 MM 1346
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/66 (21%), Positives = 33/66 (50%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YS Y ++ + ++P ++ ++ I+Y M +++F F+ +S + L +G
Sbjct: 1232 YSALPYALAQVVCEIPYVLIQTTYYTLIIYAMMCFEWTLAKFFWFYFVSFMSFLYFTYYG 1291
Query: 544 LMIGAV 527
+M A+
Sbjct: 1292 MMTVAL 1297
>At1g71960.1 68414.m08318 ABC transporter family protein similar to
breast cancer resistance protein GB:AAC97367 from [Homo
sapiens]
Length = 662
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
Y+L SY+++ + L + +V A F Y M I F + ++ L VL +Q G
Sbjct: 475 YTLSSYFMAHVLGSLSMELVLPASFLTFTYWMVYLRPGIVPFLLTLSVLLLYVLASQGLG 534
Query: 544 LMIGA 530
L +GA
Sbjct: 535 LALGA 539
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YS Y IS V++ + V++ I+Y+M G + +F F+ L + +G
Sbjct: 1270 YSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGYDWTVVKFFWFYYYMLTCFVYFTLYG 1329
Query: 544 LMIGAV 527
+M+ A+
Sbjct: 1330 MMLVAL 1335
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 500 GPTLSVPMM-MFAGFGVTLRDLPPYLYWGSYVSYLRYGLEGFV 375
G TL++ ++ + GF ++ D+P +L W Y S + YG V
Sbjct: 691 GGTLALLVVFVLGGFIISKDDIPSWLTWCYYTSPMMYGQTALV 733
>At1g66950.1 68414.m07612 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1454
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YS Y IS V++ + V++ I+Y+M G +++F F+ L + + +G
Sbjct: 1271 YSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGCNWTMAKFLWFYYYMLTSFIYFTLYG 1330
Query: 544 LMIGAV 527
+M+ A+
Sbjct: 1331 MMLMAL 1336
>At1g54430.1 68414.m06209 hypothetical protein
Length = 1639
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 362 GLERPKLDCNEAPICLYKYPRQFLSEVAMSPDRF 261
G +RP C E IC K+PR+F++ M+ F
Sbjct: 761 GKDRPSSPCMEKGICSKKFPREFVNHTKMNESGF 794
>At3g53510.1 68416.m05908 ABC transporter family protein breast
cancer resistance protein (BCRP), Homo sapiens,
EMBL:AF098951
Length = 739
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSF- 548
Y SY ++ TI+ +P I+ A F+A ++ G F FF L SF
Sbjct: 522 YRRSSYVLAHTIISIPALIILSAAFAASTFSAVGLAGGSEGFLFFFFTILTAFWAGSSFV 581
Query: 547 GLMIGAVFNVVNG 509
+ G V +V+ G
Sbjct: 582 TFLSGVVSHVMIG 594
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 476 MMFAGFGVTLRDLPPYLYWGSYVSYLRYGLEG 381
++F+GF ++ +P Y W Y+S ++Y EG
Sbjct: 606 LLFSGFFISRDRIPLYWIWFHYLSLVKYPYEG 637
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/67 (23%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISR-FGMFFAISLYTVLVAQSF 548
Y+ +Y ++ +V++P ++ ++ IVY M G ++ + F F++I ++L+ F
Sbjct: 1206 YNPWAYSLAQVLVEIPYSLFQSIIYVIIVYPMVGYHWSVYKVFWSFYSI-FCSLLIFNYF 1264
Query: 547 GLMIGAV 527
G+++ V
Sbjct: 1265 GMLLVVV 1271
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 503 LGPTLSVPMMMFAGFGVTLRDLPPYLYWGSYVSYLRY 393
+G V + +F GF V +P +L WG ++S L Y
Sbjct: 653 IGSISIVLLSVFGGFIVRKPSMPSWLEWGFWLSPLSY 689
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 473 MFAGFGVTLRDLPPYLYWGSYVSYLRYGLEGFVGAIYG 360
+FAGF + + +P + W Y+S + LEG + + YG
Sbjct: 1229 LFAGFVIPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYG 1266
>At2g37360.1 68415.m04582 ABC transporter family protein
Length = 755
Score = 31.1 bits (67), Expect = 0.77
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 476 MMFAGFGVTLRDLPPYLYWGSYVSYLRYGLEG 381
++F+GF ++ +P Y W Y+S ++Y EG
Sbjct: 622 LLFSGFFISRDRIPVYWLWFHYISLVKYPYEG 653
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 31.1 bits (67), Expect = 0.77
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 473 MFAGFGVTLRDLPPYLYWGSYVSYLRY 393
+FAGF + D+P +L WG +V+ + Y
Sbjct: 666 VFAGFAIPYTDMPGWLKWGFWVNPISY 692
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 473 MFAGFGVTLRDLPPYLYWGSYVSYLRYGLEGFVGAIYG 360
+FAGF + + +P + W Y+S + LEG + + YG
Sbjct: 1293 LFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYG 1330
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 509 SFLGPTLSVPMMMFAGFGVTLRDLPPYLYWGSYVSYLRY 393
S G + + +F GF + +P +L WG ++S L Y
Sbjct: 646 SITGAISVLLLALFGGFVIPKSSMPTWLGWGFWLSPLSY 684
>At2g38290.2 68415.m04703 ammonium transporter 2 (AMT2) identical to
SP|Q9M6N7 Ammonium transporter 2 (AtAMT2) {Arabidopsis
thaliana}
Length = 359
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 425 YWGSYVSYLRYGLEGFVGAIYGLERPKLDCNEAP 324
Y G YV +L G+ GFV A + RPK D P
Sbjct: 65 YSGGYVIHLSSGVAGFVAAYWVGPRPKADRERFP 98
>At2g38290.1 68415.m04704 ammonium transporter 2 (AMT2) identical to
SP|Q9M6N7 Ammonium transporter 2 (AtAMT2) {Arabidopsis
thaliana}
Length = 475
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 425 YWGSYVSYLRYGLEGFVGAIYGLERPKLDCNEAP 324
Y G YV +L G+ GFV A + RPK D P
Sbjct: 181 YSGGYVIHLSSGVAGFVAAYWVGPRPKADRERFP 214
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana plumbaginifolia]
Length = 1423
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YS Y + +++P +V V+ IVY M G +F + + L +G
Sbjct: 1243 YSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYG 1302
Query: 544 LMIGAV 527
+M A+
Sbjct: 1303 MMAVAM 1308
>At2g13610.1 68415.m01500 ABC transporter family protein
Length = 649
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 473 MFAGFGVTLRDLPPYLYWGSYVSYLRYGLEGFV 375
+F+G+ ++ ++P Y + Y+S +Y EGF+
Sbjct: 545 LFSGYFISNHEIPGYWIFMHYISLFKYPFEGFL 577
>At3g16720.1 68416.m02135 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 304
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 276 VSGQILVDVLALTIFVFVLRIAAFFLLKWKLNAVR*RHL 160
+SG+I++ + + FV +L + +W L R RHL
Sbjct: 26 MSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHL 64
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 479 MMMFAGFGVTLRDLPPYLYWGSYVSYLRYG 390
+ + GF + D+ P+ WG +VS L YG
Sbjct: 687 VFLLGGFVIPKADIKPWWVWGFWVSPLSYG 716
>At2g39350.1 68415.m04830 ABC transporter family protein
Length = 740
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 476 MMFAGFGVTLRDLPPYLYWGSYVSYLRYGLE 384
++F+GF + +P Y W Y+S ++Y E
Sbjct: 607 LLFSGFFINRNRIPDYWIWFHYMSLVKYPYE 637
>At5g13580.1 68418.m01570 ABC transporter family protein
Length = 727
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 476 MMFAGFGVTLRDLPPYLYWGSYVSYLRYGLE 384
++F+GF + +P Y W Y+S ++Y E
Sbjct: 594 LLFSGFFINRDRIPGYWIWFHYISLVKYPYE 624
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
Y +Y I T++ +P++ V++ + Y + G SRF F + + S
Sbjct: 616 YPAWAYAIPATVLKVPLSFFESLVWTCLSYYVIGYTPEASRFFKQFILLFAVHFTSISMF 675
Query: 544 LMIGAVFNVV 515
+ A+F V
Sbjct: 676 RCLAAIFQTV 685
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 473 MFAGFGVTLRDLPPYLYWGSYVSYLRYG 390
+FAGF + +P +L WG + + L YG
Sbjct: 701 VFAGFVIPPPSMPAWLKWGFWANPLSYG 728
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -3
Query: 473 MFAGFGVTLRDLPPYLYWGSYVSYLRYGLEGFVGAIYG 360
+F+GF + +P + W Y++ + L GF+ + YG
Sbjct: 1353 LFSGFLIPQTQVPGWWIWLYYLTPTSWTLNGFISSQYG 1390
>At3g21090.1 68416.m02666 ABC transporter family protein similar to
ATP-binding cassette, sub-family G (WHITE), member 2
GB:NP_036050 from [Mus musculus]
Length = 691
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 479 MMMFAGFGVTLRDLPPYLYWGSYVSYLRYG 390
+MM +GF L DLP ++W VSY+ YG
Sbjct: 532 IMMTSGFFRLLPDLPK-IFWRYPVSYISYG 560
>At3g13220.1 68416.m01654 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter; similar to white
protein GB:Q27256 [Anopheles gambiae]
Length = 685
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
Y L YY+ T+ D+ ++ F IVY M+ I F L + +Q G
Sbjct: 504 YRLSVYYVCSTLCDMVAHVLYPTFFMIIVYFMAEFNRNIPCFLFTVLTILLIAITSQGAG 563
Query: 544 LMIGA 530
+GA
Sbjct: 564 EFLGA 568
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/66 (16%), Positives = 29/66 (43%)
Frame = -1
Query: 724 YSLGSYYISITIVDLPITIVSCAVFSAIVYTMSGQPMAISRFGMFFAISLYTVLVAQSFG 545
YS + + ++ P + ++S I Y M+ + +F + ++++ +G
Sbjct: 1236 YSALPFAFAQVFIEFPYVLAQSTIYSTIFYAMAAFEWSAVKFLWYLFFMYFSIMYFTFYG 1295
Query: 544 LMIGAV 527
+M A+
Sbjct: 1296 MMTTAI 1301
>At3g55090.1 68416.m06118 ABC transporter family protein ATP-binding
cassette-sub-family G-member 2, Mus musculus,
EMBL:AF140218
Length = 720
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 476 MMFAGFGVTLRDLPPYLYWGSYVSYLRYGLE 384
++F+GF + +P Y W Y+S ++Y E
Sbjct: 587 LLFSGFFINRDRIPQYWIWFHYLSLVKYPYE 617
>At1g51460.1 68414.m05792 ABC transporter family protein similar to
SP|Q9UNQ0 ATP-binding cassette, sub-family G, member 2
(Placenta-specific ATP- binding cassette transporter)
(Breast cancer resistance protein) {Homo sapiens};
contains Pfam profile PF00005: ABC transporter
Length = 678
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 479 MMMFAGFGVTLRDLPPYLYWGSYVSYLRYGLEGFVGA 369
M++ AGF DLP ++W VSY+ YG GA
Sbjct: 527 MVLSAGFFRFFPDLP-MVFWRYPVSYINYGAWALQGA 562
>At5g04770.1 68418.m00492 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 583
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 268 TDSGGRSSAHDLRLRVKDCSFLPSKMEVKRCSIKTSN 158
+++GG SS LR+ + S PS++ + S+ TS+
Sbjct: 7 SNNGGHSSFSSLRVYLNSLSATPSRLSRRAISVSTSS 43
>At4g25640.1 68417.m03692 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 488
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 361 GWKDRNWTAMKHLYAFINTQDSSSLK*LCL 272
GW +W A K ++AF+ +S++ LCL
Sbjct: 242 GWTGLSWLAFKEIWAFVRLSIASAVM-LCL 270
>At4g15233.1 68417.m02334 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1168
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 503 LGPTLSVPMMMFAGFGVTLRDLPPYLYWGSYVSYLRY 393
+G V + +F GF V +P +L WG ++S L Y
Sbjct: 637 VGSISIVLLSVFGGFIVRKPSMPSWLEWGFWLSPLSY 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,572,144
Number of Sequences: 28952
Number of extensions: 309118
Number of successful extensions: 999
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -