Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0574.Seq
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        29   0.042
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    27   0.17 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   6.4  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   8.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.4  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = -1

Query: 333 DLSGLNLTTQPPGLQNFTSINLDNNQSHILMQPTTIDS 220
           DLSG+NL+  P G+ +   +NLDN Q  + ++P  ++S
Sbjct: 464 DLSGVNLSETPSGISSL--LNLDNQQ--LELKPIDLNS 497


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
 Frame = -3

Query: 226 RLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSA---AHN--- 65
           +++ LS N+    +  F +   +S+  + + +N L N   D   ++ +      +HN   
Sbjct: 226 KVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLY 285

Query: 64  QLEFVQLESCEWLQYLNLSHN 2
           +L+F    + + LQ+L+ SHN
Sbjct: 286 ELDFDTFRNTKKLQWLDTSHN 306


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 229 DRLVKLSLNSNALE 188
           +RL+ L +NS+ALE
Sbjct: 566 ERLISLGINSDALE 579


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/32 (21%), Positives = 19/32 (59%)
 Frame = -3

Query: 193 LESINFPQGRNVSITHISMNNNALRNIDIDRL 98
           + +  F +GR++++   +    ALR + I+++
Sbjct: 41  IRTAKFARGRSINMALSNRGRKALRAVGIEKI 72


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/32 (21%), Positives = 19/32 (59%)
 Frame = -3

Query: 193 LESINFPQGRNVSITHISMNNNALRNIDIDRL 98
           + +  F +GR++++   +    ALR + I+++
Sbjct: 41  IRTAKFARGRSINMALSNRGRKALRAVGIEKI 72


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/32 (21%), Positives = 19/32 (59%)
 Frame = -3

Query: 193 LESINFPQGRNVSITHISMNNNALRNIDIDRL 98
           + +  F +GR++++   +    ALR + I+++
Sbjct: 41  IRTAKFARGRSINMALSNRGRKALRAVGIEKI 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,737
Number of Sequences: 336
Number of extensions: 3569
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)