Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0572.Seq
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   1.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   3.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   6.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 507 PRTKPATPRSPEGSIFHRIK 448
           P  KP   RS  GSI+H +K
Sbjct: 158 PENKPKKIRSKLGSIWHSVK 177


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -2

Query: 604 LVLVGHSLRK*AVIGQESRPVQSGIVFSVSGLTAYEASNTEVSGGQY 464
           L + GH L   A  G+   PV+   + S SG       N + + G Y
Sbjct: 360 LTIQGHDLTLIATDGEPVHPVRVNTIISFSGERYDFVINADQTPGAY 406


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -2

Query: 604 LVLVGHSLRK*AVIGQESRPVQSGIVFSVSGLTAYEASNTEVSGGQY 464
           L + GH L   A  G+   PV+   + S SG       N + + G Y
Sbjct: 360 LTIQGHDLTLIATDGEPVHPVRVNTIISFSGERYDFVINADQTPGAY 406


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 257 SSVHRLQGRPHLDQVVQEGDATRRQERESTAVQIPSQI 370
           +++H+ QG PH    +Q+     +Q   +TA  +PS +
Sbjct: 196 ANMHQ-QGPPHQQPPIQQQPNQGQQPPGNTAAALPSPL 232


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory
          receptor candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 11 RGSSAGFKLPPFKNIIHKVLVILSAVCV 94
          RG+   F+LP   N + KVL++   V V
Sbjct: 13 RGTPPKFELPTTHNCLKKVLLLSQIVGV 40


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 257 SSVHRLQGRPHLDQVVQEGDATRRQERESTAVQIPSQI 370
           +++H+ QG PH    +Q+     +Q   +TA  +PS +
Sbjct: 198 ANMHQ-QGPPHQQPPIQQQPNQGQQPPGNTAAALPSPL 234


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 97   IITIKMVAGGKQMNVRVTTMD 159
            IIT + V GG   ++RV T D
Sbjct: 988  IITAEEVPGGPPTSIRVETND 1008


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 678 GVFAEHLAVFLPPFV 634
           GVF E + VF+P +V
Sbjct: 132 GVFGEFVLVFVPDYV 146


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 407 LLYELIGDILRIEFGSEFELQW 342
           L + L GD+L +    E +L W
Sbjct: 145 LSFNLFGDLLTLFIKEELDLVW 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,362
Number of Sequences: 336
Number of extensions: 3649
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)