Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0571.Seq
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   3.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.4  

>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 633 TIRGIPGC*ISTRHF*STLKVQNMQFIVVTNVSIITGTFPLSSL 764
           T+R  P   I  R     LK+ +  + V    +++ GTF +  L
Sbjct: 55  TLRMFPPVPIIARQLNQDLKLASGDYTVPAGCTVVIGTFKVHRL 98


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 371 VCLDLALH*LPCGFISYKMFVFYYF 445
           VC  L    LPC F    + +F+ F
Sbjct: 224 VCFSLVEDTLPCVFFLGSILIFFIF 248


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 410 FISYKMFVFYYFRQFEYF 463
           F+SY ++V      FEYF
Sbjct: 192 FVSYNIYVCQTVSNFEYF 209


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 410 FISYKMFVFYYFRQFEYF 463
           F+SY ++V      FEYF
Sbjct: 118 FVSYNIYVCQTVSNFEYF 135


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 287 CATVCRYLSSWPFLLHSERSS 349
           CA+ C   +  P +LH  R++
Sbjct: 310 CASTCEQANDTPSILHELRNN 330


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 287 CATVCRYLSSWPFLLHSERSS 349
           CA+ C   +  P +LH  R++
Sbjct: 310 CASTCEQANDTPSILHELRNN 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,490
Number of Sequences: 336
Number of extensions: 3701
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)