Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0570X.Seq
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   3.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    20   9.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    20   9.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   9.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   9.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   9.4  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 247 RIITPVDYVPAPFTKRPLVL 306
           R++ P   V APF ++PL L
Sbjct: 252 RLLAPSTEVSAPFFRQPLDL 271


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 117 TRATLKESACSPWP 158
           TR TLK +  SP+P
Sbjct: 256 TRTTLKNNRASPYP 269


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 356 RPSAFFGNLPNLII*EE 406
           +P  FFG+  NL+I +E
Sbjct: 33  KPFLFFGSFYNLVIRKE 49


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 204 GLQLSPINEEFLISAN 251
           G+Q+SP NE  +++++
Sbjct: 55  GVQISPPNENLVVTSS 70


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 204 GLQLSPINEEFLISAN 251
           G+Q+SP NE  +++++
Sbjct: 56  GVQISPPNENLVVTSS 71


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 204 GLQLSPINEEFLISAN 251
           G+Q+SP NE  +++++
Sbjct: 56  GVQISPPNENLVVTSS 71


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 381 KFPKNADGLEATGFRSE 331
           KFP N D L     RSE
Sbjct: 425 KFPTNFDALIVNEMRSE 441


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 381 KFPKNADGLEATGFRSE 331
           KFP N D L     RSE
Sbjct: 317 KFPTNFDALIVNEMRSE 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,075
Number of Sequences: 336
Number of extensions: 2275
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)