Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0570X.Seq
         (450 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.6  
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           23   3.8  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     23   3.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   8.7  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 220 GDNCNPKSPARRSFSGFPGPLG 155
           G  C PK  A +   G PGP+G
Sbjct: 91  GGCCLPKCFAEKGNRGLPGPMG 112


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 193 ARRSFSGFPGPLGQGEHADSFSVARV 116
           A RS S    PLG   HA   +V RV
Sbjct: 91  AGRSTSSLTVPLGTSRHASGGTVVRV 116


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 204 GLQLSPINEEFLISANYNSR 263
           G+QLSP+NE  +I     SR
Sbjct: 61  GVQLSPVNENIVIRLADGSR 80


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -1

Query: 315 LNR*YQRPFCKRG---GDVINGSYNSRLLGIPRLWGIIATPNPQHE 187
           LN+  +  F  RG     VI+ S+ SR +  P  W +I      HE
Sbjct: 218 LNQGRKPTFIGRGFAASSVIDVSFASREIVRPDTWSVIPFSRSDHE 263


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,154
Number of Sequences: 2352
Number of extensions: 9635
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)