Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0570X.Seq
         (450 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      29   2.9  
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    29   2.9  
BT025934-1|ABG02178.1|  577|Drosophila melanogaster IP13429p pro...    28   6.7  
AE014134-72|AAF51519.1|  605|Drosophila melanogaster CG17078-PA ...    28   6.7  

>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = +3

Query: 111 GRTRATLKESACSPWPKGPGNPLKLLRAGDLGLQLSPINEEFLISANYNSR 263
           G T   +  S    W     N LK L   DL L++S IN  FLI  ++NSR
Sbjct: 119 GNTSKCIPSSCDLSWDH---NHLKSLYRSDL-LKISQINGNFLICGDFNSR 165


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = +3

Query: 111 GRTRATLKESACSPWPKGPGNPLKLLRAGDLGLQLSPINEEFLISANYNSR 263
           G T   +  S    W     N LK L   DL L++S IN  FLI  ++NSR
Sbjct: 67  GNTSKCIPSSCDLSWDH---NHLKSLYRSDL-LKISQINGNFLICGDFNSR 113


>BT025934-1|ABG02178.1|  577|Drosophila melanogaster IP13429p
           protein.
          Length = 577

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 114 RTRATLKESACSPWPKGPGNPLKLLRA-GDLGLQLSPI 224
           ++ A  KE +  PW K PG+ +KLL+  G LG +L+ +
Sbjct: 183 KSSALFKEFSI-PWSKVPGDIMKLLKGKGSLGKRLNTL 219


>AE014134-72|AAF51519.1|  605|Drosophila melanogaster CG17078-PA
           protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 114 RTRATLKESACSPWPKGPGNPLKLLRA-GDLGLQLSPI 224
           ++ A  KE +  PW K PG+ +KLL+  G LG +L+ +
Sbjct: 211 KSSALFKEFSI-PWSKVPGDIMKLLKGKGSLGKRLNTL 247


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,058,067
Number of Sequences: 53049
Number of extensions: 463536
Number of successful extensions: 847
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)