Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0569.Seq
(786 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 151 8e-37
03_01_0547 + 4093196-4093657,4094267-4095148 151 8e-37
03_01_0544 + 4082528-4082989,4083585-4084466 151 8e-37
03_01_0543 + 4076981-4077442,4078145-4079026 151 8e-37
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 49 5e-06
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 48 1e-05
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 48 1e-05
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 39 0.005
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 38 0.009
02_04_0462 + 23131433-23132836 36 0.048
06_03_1165 - 28106604-28106915 33 0.19
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 32 0.59
11_06_0516 + 24502645-24504507 29 4.2
03_05_0896 - 28592658-28593331,28594069-28595455 29 4.2
11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903 29 5.5
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 28 7.3
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 28 9.7
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 28 9.7
05_01_0363 - 2846133-2846441,2846820-2846885,2847184-2847276,284... 28 9.7
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 28 9.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 151 bits (365), Expect = 8e-37
Identities = 66/84 (78%), Positives = 77/84 (91%)
Frame = -3
Query: 760 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 581
VKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++N
Sbjct: 277 VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMN 336
Query: 580 HPGQISNGYTPVLDCHTAHIACKF 509
HPGQI NGY PVLDCHT+HIA KF
Sbjct: 337 HPGQIGNGYAPVLDCHTSHIAVKF 360
Score = 117 bits (282), Expect = 9e-27
Identities = 55/94 (58%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Frame = -2
Query: 533 HCPH-CLQISEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 357
H H ++ +E+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGR
Sbjct: 352 HTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGR 411
Query: 356 FAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAAEK 255
FAVRDMRQTVAVGVIK V K+ G KVTKAA K
Sbjct: 412 FAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAK 445
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 151 bits (365), Expect = 8e-37
Identities = 66/84 (78%), Positives = 77/84 (91%)
Frame = -3
Query: 760 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 581
VKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++N
Sbjct: 277 VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMN 336
Query: 580 HPGQISNGYTPVLDCHTAHIACKF 509
HPGQI NGY PVLDCHT+HIA KF
Sbjct: 337 HPGQIGNGYAPVLDCHTSHIAVKF 360
Score = 117 bits (282), Expect = 9e-27
Identities = 55/94 (58%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Frame = -2
Query: 533 HCPH-CLQISEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 357
H H ++ +E+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGR
Sbjct: 352 HTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGR 411
Query: 356 FAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAAEK 255
FAVRDMRQTVAVGVIK V K+ G KVTKAA K
Sbjct: 412 FAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAK 445
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 151 bits (365), Expect = 8e-37
Identities = 66/84 (78%), Positives = 77/84 (91%)
Frame = -3
Query: 760 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 581
VKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++N
Sbjct: 277 VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMN 336
Query: 580 HPGQISNGYTPVLDCHTAHIACKF 509
HPGQI NGY PVLDCHT+HIA KF
Sbjct: 337 HPGQIGNGYAPVLDCHTSHIAVKF 360
Score = 117 bits (282), Expect = 9e-27
Identities = 55/94 (58%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Frame = -2
Query: 533 HCPH-CLQISEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 357
H H ++ +E+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGR
Sbjct: 352 HTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGR 411
Query: 356 FAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAAEK 255
FAVRDMRQTVAVGVIK V K+ G KVTKAA K
Sbjct: 412 FAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAK 445
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 151 bits (365), Expect = 8e-37
Identities = 66/84 (78%), Positives = 77/84 (91%)
Frame = -3
Query: 760 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 581
VKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA FT+QVI++N
Sbjct: 277 VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMN 336
Query: 580 HPGQISNGYTPVLDCHTAHIACKF 509
HPGQI NGY PVLDCHT+HIA KF
Sbjct: 337 HPGQIGNGYAPVLDCHTSHIAVKF 360
Score = 117 bits (282), Expect = 9e-27
Identities = 55/94 (58%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Frame = -2
Query: 533 HCPH-CLQISEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGR 357
H H ++ +E+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGR
Sbjct: 352 HTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGR 411
Query: 356 FAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAAEK 255
FAVRDMRQTVAVGVIK V K+ G KVTKAA K
Sbjct: 412 FAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAK 445
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = -2
Query: 506 EIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTV 327
+I ++++TGK+++ P+ + S A++ + K +CVE F LGR +R T+
Sbjct: 583 KILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLRSQGNTI 642
Query: 326 AVGVIKAV 303
AVG++ V
Sbjct: 643 AVGIVSRV 650
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = -2
Query: 533 HCPHCLQISEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 354
H ++++I +D+ GK ++ P+ +KS A+V + P+CV+ F + LGR
Sbjct: 599 HVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRA 657
Query: 353 AVRDMRQTVAVGVI 312
+R T+AVGV+
Sbjct: 658 FLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = -2
Query: 533 HCPHCLQISEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 354
H ++++I +D+ GK ++ P+ +KS A+V + P+CV+ F + LGR
Sbjct: 599 HVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRA 657
Query: 353 AVRDMRQTVAVGVI 312
+R T+AVGV+
Sbjct: 658 FLRSSGSTIAVGVV 671
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -3
Query: 781 PRQHHY*VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFT 602
P + + V SV + ++ A PG+NV + + ++ G+V K NP ++F
Sbjct: 217 PNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFR 275
Query: 601 AQVIVLN--HPGQISNGYTPVLDCHTAHIACK 512
AQ+ +L + GY VL H+ C+
Sbjct: 276 AQLQILELLDNAIFTAGYKAVLHIHSVVEECE 307
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -2
Query: 500 KEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 345
K++ D + K + P +K+G + + + +C+E+F +FP LGRF +R
Sbjct: 365 KKEADPKK-KKPKRKPLFVKNGAVVVCRIQVNNLICIENFSDFPQLGRFTLR 415
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = -3
Query: 781 PRQHHY*VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFT 602
P + + V + + ++ A P +NV + + +++ G+V S NP +F
Sbjct: 262 PNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVL-SSIGNPVGAVTEFN 320
Query: 601 AQVIVLN--HPGQISNGYTPVLDCHTAHIACK 512
AQ+ +L + GY VL H+ C+
Sbjct: 321 AQLQILELLDNAIFTAGYKAVLHIHSVVEECE 352
>02_04_0462 + 23131433-23132836
Length = 467
Score = 35.5 bits (78), Expect = 0.048
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = -3
Query: 760 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 581
V VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKD 383
Query: 580 HPGQIS---NGYTPVLDCHTAHI 521
G+ S GY P T +
Sbjct: 384 EGGRHSPFFPGYRPQFYMRTTDV 406
>06_03_1165 - 28106604-28106915
Length = 103
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -2
Query: 776 PTSLLSQVCGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 645
P SL SQ G A SSP + R R +R E + A L CW
Sbjct: 57 PVSLSSQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 31.9 bits (69), Expect = 0.59
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = -3
Query: 760 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVL- 584
V VEM + L GDNVG ++ + +++RG V K K F A++ VL
Sbjct: 315 VTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLT 372
Query: 583 -----NHPGQISNGYTPVLDCHTAHIACK 512
H +SN Y+P TA + K
Sbjct: 373 KDEGGRHTAFLSN-YSPQFYFRTADVTGK 400
>11_06_0516 + 24502645-24504507
Length = 620
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -3
Query: 751 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 572
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 571 QISNG 557
+I G
Sbjct: 170 EIRRG 174
>03_05_0896 - 28592658-28593331,28594069-28595455
Length = 686
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 536 PHCPHC-LQISEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 366
P PH L+I EIK+ +R G+ + ++++GD SKP E F P
Sbjct: 634 PSMPHVVLRIEEIKKSSERLEGRDPQQQASNLEAGDDQ-----TSKPESAEGLNPFAP 686
>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
Length = 1135
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 94 NYKIMLHYKPCKKYRKGMSL*P-FFPSK 174
N M PCKK +KGM++ P FF SK
Sbjct: 657 NVNKMSKLNPCKKQKKGMNILPKFFTSK 684
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 262 AALVTLPPPASLKLT-ALMTPTATVCLMSRTAKRPRGGNSWKDSTHRGLEGTKLTMAASP 438
A + L PA + A+ P TV + T ++ RG K +GL G KLT S
Sbjct: 266 ALIYPLVSPAVVSCDIAIAYPMPTVNPVESTPRKGRGRPRKKPVEIKGLSGIKLTEDLST 325
Query: 439 DLMDFGLTSVDLPVRR 486
L LT ++ +R
Sbjct: 326 ALSPIALTCMEPKKKR 341
>07_03_1580 +
27888275-27888360,27888755-27888871,27888964-27889045,
27889710-27889821,27889958-27890071,27890163-27890326
Length = 224
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/82 (30%), Positives = 34/82 (41%)
Frame = -2
Query: 479 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVN 300
+GK T V+ +I D + VPSKP EFP R+ + KAV
Sbjct: 22 SGK-TYVSGNAISKDDIKVFAAVPSKPGA-----EFPNAARWYDTVAAALASRFPGKAVG 75
Query: 299 FKEAGGGKVTKAAEKPPRARSS 234
GGG + AA P A+ +
Sbjct: 76 VNLPGGGAASSAAAAAPAAKDA 97
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 268 KLPKSHQGQEVARAVNSTIFHTTAILHSPKGVSKEKRATNSFLFYIFYKA 119
++ +S QGQ V A + H IL + K A NSFL + KA
Sbjct: 28 RIIESTQGQNVYPADQQMLIHQGKILKDDTTLEGNKVAENSFLVIMLSKA 77
>05_01_0363 -
2846133-2846441,2846820-2846885,2847184-2847276,
2847487-2847600,2847762-2847849,2848116-2848199,
2848312-2848411,2848886-2848949,2849339-2849419,
2849944-2850000,2850188-2850387,2850668-2850971,
2851518-2851707,2851922-2852032,2852111-2852192,
2852443-2853046
Length = 848
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 376 SWKDSTHRGLEGTKLTMAASPDLMDFGLTSVDLPVRRSTFSLISEICR 519
SW +++ + K T ++S ++ D G T + +P R+ T L + +C+
Sbjct: 440 SWPENSASSSQCNK-TGSSSSEIADQGPTIIYVPTRKQTVELANYLCK 486
>02_02_0307 -
8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -2
Query: 515 QISEIKEKVDRRTGK--STEVNPKSIKSGDAAIVNLVPSK 402
Q+ EIK+K D ++GK ST+ N S + DA VN +K
Sbjct: 612 QLKEIKKKTDEKSGKGASTKEN-TSTNTNDAQTVNSSSTK 650
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,487,934
Number of Sequences: 37544
Number of extensions: 477821
Number of successful extensions: 1343
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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