Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0567.Seq
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   6.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.4  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 562 QVPRRPGHLRGAPGLLRPGRHHP 630
           QVP+  G  R  PG  R  RH P
Sbjct: 320 QVPQLAGGGRRGPGPARSRRHLP 342


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 640 PSRWSYKQINEEEKRKKDKGNRP 708
           P +W+++ IN+  +R+  KG  P
Sbjct: 53  PPQWTWQCINQRCERRHIKGAIP 75


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 184 LKTLNNHKYPDSSFDNPFLYAWFAVSSCR 270
           + TL     P +S  NP +Y  F+   CR
Sbjct: 323 IATLIQSLAPLNSAANPVIYCLFSTHLCR 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,547
Number of Sequences: 336
Number of extensions: 3447
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)