Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0565.Seq
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    26   0.38 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    26   0.38 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         24   1.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.6  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   4.6  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   8.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.1  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +3

Query: 270 ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 386
           A PYG   +     ++  +  PP+DD   L     +D G CG
Sbjct: 332 AHPYGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCG 373


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +3

Query: 270 ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 386
           A PYG   +     ++  +  PP+DD   L     +D G CG
Sbjct: 333 AHPYGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCG 374


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +1

Query: 148 WLL*RAISIRLKSVKNIQKITQSMKMVSAAKYTRADVT*KLLVPMVKVQYSSMKG 312
           WL    +S R+K+ + ++K ++ +K +  AK         L    +  QYS  +G
Sbjct: 155 WLFGDNLSERMKTTRALEKTSEELK-IPKAKINTGKTQYNLNSKSLPRQYSQSRG 208


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 321 TPPEDDPKQLFVAMTSDRGLCG 386
           TPPEDD + L  +++S   L G
Sbjct: 668 TPPEDDAESLNQSISSPGALSG 689


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 321 TPPEDDPKQLFVAMTSDRGLCG 386
           TPPEDD + L  +++S   L G
Sbjct: 560 TPPEDDAESLNQSISSPGALSG 581


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = +3

Query: 270 ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 386
           A PYG   +     ++  +  PP+D    L     +D G CG
Sbjct: 333 AHPYGTTRLMSSFAFDNNDQGPPQDGAGNLISPSINDDGTCG 374


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 269 SFQVTSARVYLAADTIFMDCVIFWIFFTDL 180
           SF   +  + LAA  IF D V++ +  +DL
Sbjct: 137 SFWAVTIFLVLAASVIFFDVVVWGLSASDL 166


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 371 QRFVRSCTHWCIQSDPQPSRRT 436
           +RFV+  T++    DP P  +T
Sbjct: 461 KRFVKLWTNFAKNGDPNPKEKT 482


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 371 QRFVRSCTHWCIQSDPQPSRRT 436
           +RFV+  T +    DP P  +T
Sbjct: 462 KRFVKLWTSFAKNGDPNPKEKT 483


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 374 SVRGHSNKQLLGVIFRRCNLS 312
           ++ GH    LL +IF +C L+
Sbjct: 79  AIYGHPLFPLLALIFEKCELA 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,594
Number of Sequences: 336
Number of extensions: 4612
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)