Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0565.Seq
(758 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12701-1|CAA73233.1| 169|Drosophila melanogaster ATP synthase, ... 119 4e-27
AY113454-1|AAM29459.1| 297|Drosophila melanogaster RE35715p pro... 119 4e-27
AE014297-4433|AAN14186.1| 297|Drosophila melanogaster CG7610-PC... 119 4e-27
AE014297-4432|AAF56932.1| 297|Drosophila melanogaster CG7610-PB... 119 4e-27
AE014297-4431|AAN14185.1| 297|Drosophila melanogaster CG7610-PA... 119 4e-27
BT030115-1|ABN49254.1| 528|Drosophila melanogaster IP08109p pro... 30 3.9
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 30 3.9
AE014134-2536|AAF53420.2| 225|Drosophila melanogaster CG15277-P... 30 3.9
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 29 5.2
BT023123-1|AAY55539.1| 572|Drosophila melanogaster IP10857p pro... 29 6.9
BT023067-1|AAY55483.1| 572|Drosophila melanogaster IP10957p pro... 29 6.9
BT022975-1|AAY55391.1| 572|Drosophila melanogaster IP11157p pro... 29 6.9
AE013599-3476|AAF46906.3| 271|Drosophila melanogaster CG30266-P... 29 6.9
>Y12701-1|CAA73233.1| 169|Drosophila melanogaster ATP synthase,
gamma subunit protein.
Length = 169
Score = 119 bits (287), Expect = 4e-27
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 RDLKAARPYGEGAVQFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLG 431
RDLKAARPYG GA QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L
Sbjct: 62 RDLKAARPYGIGAQQFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELA 121
Query: 432 EPGAENIKVICVGDKSRGILQRLYGNTSLVLLMRSDVSHL 551
+ A N KV CVGDKSR IL RLYG +L++ ++V L
Sbjct: 122 QDEA-NTKVFCVGDKSRAILSRLYGKN--ILMVANEVGRL 158
Score = 57.6 bits (133), Expect = 2e-08
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 133 RQTGIWLL*RAISIRLKSVKNIQKITQSMKMVSAAKYTRAD 255
+Q G+ L + ISIRLKSVKNIQKITQSMKMVSAAKY RA+
Sbjct: 22 QQRGMATL-KMISIRLKSVKNIQKITQSMKMVSAAKYARAE 61
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +2
Query: 491 AKIVRKHIISVANEIGRLPPTFLDASQLA 577
+++ K+I+ VANE+GRLPPTFLDAS++A
Sbjct: 141 SRLYGKNILMVANEVGRLPPTFLDASKIA 169
>AY113454-1|AAM29459.1| 297|Drosophila melanogaster RE35715p
protein.
Length = 297
Score = 119 bits (287), Expect = 4e-27
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 RDLKAARPYGEGAVQFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLG 431
RDLKAARPYG GA QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L
Sbjct: 62 RDLKAARPYGIGAQQFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELA 121
Query: 432 EPGAENIKVICVGDKSRGILQRLYGNTSLVLLMRSDVSHL 551
+ A N KV CVGDKSR IL RLYG +L++ ++V L
Sbjct: 122 QDEA-NTKVFCVGDKSRAILSRLYGKN--ILMVANEVGRL 158
Score = 114 bits (275), Expect = 1e-25
Identities = 49/88 (55%), Positives = 71/88 (80%)
Frame = +2
Query: 491 AKIVRKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDL 670
+++ K+I+ VANE+GRLPPTFLDAS++A +L +GY++ GKI+YN+FKSVVSY S L
Sbjct: 141 SRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTL 200
Query: 671 PLYTKKSIESATKLTAYDSLDSDVLQSY 754
P+++ ++E + KL YDSLDSDV++SY
Sbjct: 201 PIFSGSTVEKSEKLAVYDSLDSDVVKSY 228
Score = 57.6 bits (133), Expect = 2e-08
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 133 RQTGIWLL*RAISIRLKSVKNIQKITQSMKMVSAAKYTRAD 255
+Q G+ L + ISIRLKSVKNIQKITQSMKMVSAAKY RA+
Sbjct: 22 QQRGMATL-KMISIRLKSVKNIQKITQSMKMVSAAKYARAE 61
>AE014297-4433|AAN14186.1| 297|Drosophila melanogaster CG7610-PC,
isoform C protein.
Length = 297
Score = 119 bits (287), Expect = 4e-27
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 RDLKAARPYGEGAVQFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLG 431
RDLKAARPYG GA QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L
Sbjct: 62 RDLKAARPYGIGAQQFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELA 121
Query: 432 EPGAENIKVICVGDKSRGILQRLYGNTSLVLLMRSDVSHL 551
+ A N KV CVGDKSR IL RLYG +L++ ++V L
Sbjct: 122 QDEA-NTKVFCVGDKSRAILSRLYGKN--ILMVANEVGRL 158
Score = 114 bits (275), Expect = 1e-25
Identities = 49/88 (55%), Positives = 71/88 (80%)
Frame = +2
Query: 491 AKIVRKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDL 670
+++ K+I+ VANE+GRLPPTFLDAS++A +L +GY++ GKI+YN+FKSVVSY S L
Sbjct: 141 SRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTL 200
Query: 671 PLYTKKSIESATKLTAYDSLDSDVLQSY 754
P+++ ++E + KL YDSLDSDV++SY
Sbjct: 201 PIFSGSTVEKSEKLAVYDSLDSDVVKSY 228
Score = 57.6 bits (133), Expect = 2e-08
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 133 RQTGIWLL*RAISIRLKSVKNIQKITQSMKMVSAAKYTRAD 255
+Q G+ L + ISIRLKSVKNIQKITQSMKMVSAAKY RA+
Sbjct: 22 QQRGMATL-KMISIRLKSVKNIQKITQSMKMVSAAKYARAE 61
>AE014297-4432|AAF56932.1| 297|Drosophila melanogaster CG7610-PB,
isoform B protein.
Length = 297
Score = 119 bits (287), Expect = 4e-27
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 RDLKAARPYGEGAVQFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLG 431
RDLKAARPYG GA QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L
Sbjct: 62 RDLKAARPYGIGAQQFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELA 121
Query: 432 EPGAENIKVICVGDKSRGILQRLYGNTSLVLLMRSDVSHL 551
+ A N KV CVGDKSR IL RLYG +L++ ++V L
Sbjct: 122 QDEA-NTKVFCVGDKSRAILSRLYGKN--ILMVANEVGRL 158
Score = 114 bits (275), Expect = 1e-25
Identities = 49/88 (55%), Positives = 71/88 (80%)
Frame = +2
Query: 491 AKIVRKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDL 670
+++ K+I+ VANE+GRLPPTFLDAS++A +L +GY++ GKI+YN+FKSVVSY S L
Sbjct: 141 SRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTL 200
Query: 671 PLYTKKSIESATKLTAYDSLDSDVLQSY 754
P+++ ++E + KL YDSLDSDV++SY
Sbjct: 201 PIFSGSTVEKSEKLAVYDSLDSDVVKSY 228
Score = 57.6 bits (133), Expect = 2e-08
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 133 RQTGIWLL*RAISIRLKSVKNIQKITQSMKMVSAAKYTRAD 255
+Q G+ L + ISIRLKSVKNIQKITQSMKMVSAAKY RA+
Sbjct: 22 QQRGMATL-KMISIRLKSVKNIQKITQSMKMVSAAKYARAE 61
>AE014297-4431|AAN14185.1| 297|Drosophila melanogaster CG7610-PA,
isoform A protein.
Length = 297
Score = 119 bits (287), Expect = 4e-27
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 RDLKAARPYGEGAVQFYERAEVTPPED-DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLG 431
RDLKAARPYG GA QF+E+ E+ P E +PK+L +A+TSDRGLCGAVHTGV+++IR L
Sbjct: 62 RDLKAARPYGIGAQQFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELA 121
Query: 432 EPGAENIKVICVGDKSRGILQRLYGNTSLVLLMRSDVSHL 551
+ A N KV CVGDKSR IL RLYG +L++ ++V L
Sbjct: 122 QDEA-NTKVFCVGDKSRAILSRLYGKN--ILMVANEVGRL 158
Score = 114 bits (275), Expect = 1e-25
Identities = 49/88 (55%), Positives = 71/88 (80%)
Frame = +2
Query: 491 AKIVRKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDL 670
+++ K+I+ VANE+GRLPPTFLDAS++A +L +GY++ GKI+YN+FKSVVSY S L
Sbjct: 141 SRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTL 200
Query: 671 PLYTKKSIESATKLTAYDSLDSDVLQSY 754
P+++ ++E + KL YDSLDSDV++SY
Sbjct: 201 PIFSGSTVEKSEKLAVYDSLDSDVVKSY 228
Score = 57.6 bits (133), Expect = 2e-08
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 133 RQTGIWLL*RAISIRLKSVKNIQKITQSMKMVSAAKYTRAD 255
+Q G+ L + ISIRLKSVKNIQKITQSMKMVSAAKY RA+
Sbjct: 22 QQRGMATL-KMISIRLKSVKNIQKITQSMKMVSAAKYARAE 61
>BT030115-1|ABN49254.1| 528|Drosophila melanogaster IP08109p
protein.
Length = 528
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 96 GCRHPSRGGGLPSPNRNMATLKGHFHPS*ICEKYPENHTVHEDGVS 233
G H GGG+P + ATL H H +P + H G S
Sbjct: 431 GRLHHPPGGGVPGGATHTATLNRHHHQQQQLHHHPHHQQPHHSGSS 476
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 42 NFTDKHP*NLQNVGTLRDGCRHPSRGGGLPSPNRNMATLKGHFHP 176
N P +L N + G + G LPSP T KG HP
Sbjct: 90 NNAQNDPLSLTNTAAVTKGAKSSISKGKLPSPLSTSYTFKGKLHP 134
>AE014134-2536|AAF53420.2| 225|Drosophila melanogaster CG15277-PA
protein.
Length = 225
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 96 GCRHPSRGGGLPSPNRNMATLKGHFHPS*ICEKYPENHTVHEDGVS 233
G H GGG+P + ATL H H +P + H G S
Sbjct: 128 GRLHHPPGGGVPGGATHTATLNRHHHQQQQLHHHPHHQQPHHSGSS 173
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 42 NFTDKHP*NLQNVGTLRDGCRHPSRGGGLPSPNRNMATLKGHFHPS 179
N K P ++ N DG + G LPSP + T KG P+
Sbjct: 87 NIAQKDPLSIDNTAADTDGAKSSILKGKLPSPPLSSHTYKGKLPPA 132
>BT023123-1|AAY55539.1| 572|Drosophila melanogaster IP10857p
protein.
Length = 572
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 482 ARFISHTDHLDVLSTRFAE--TVADHFGYTSVYSSAQTSVRGHSNKQLL 342
A HTD + L++RF E T+ D+ G T ++ +A GH LL
Sbjct: 88 AVLFGHTDIVRYLASRFPETMTITDNDGRTPLHYAATIKDNGHFYNMLL 136
>BT023067-1|AAY55483.1| 572|Drosophila melanogaster IP10957p
protein.
Length = 572
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 482 ARFISHTDHLDVLSTRFAE--TVADHFGYTSVYSSAQTSVRGHSNKQLL 342
A HTD + L++RF E T+ D+ G T ++ +A GH LL
Sbjct: 88 AVLFGHTDIVRYLASRFPETMTITDNDGRTPLHYAATIKDNGHFYNMLL 136
>BT022975-1|AAY55391.1| 572|Drosophila melanogaster IP11157p
protein.
Length = 572
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 482 ARFISHTDHLDVLSTRFAE--TVADHFGYTSVYSSAQTSVRGHSNKQLL 342
A HTD + L++RF E T+ D+ G T ++ +A GH LL
Sbjct: 88 AVLFGHTDIVRYLASRFPETMTITDNDGRTPLHYAATIKDNGHFYNMLL 136
>AE013599-3476|AAF46906.3| 271|Drosophila melanogaster CG30266-PA
protein.
Length = 271
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 482 ARFISHTDHLDVLSTRFAE--TVADHFGYTSVYSSAQTSVRGHSNKQLL 342
A HTD + L++RF E T+ D+ G T ++ +A GH LL
Sbjct: 118 AVLFGHTDIVRYLASRFPETMTITDNDGRTPLHYAATIKDNGHFYNMLL 166
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,202,302
Number of Sequences: 53049
Number of extensions: 915561
Number of successful extensions: 2282
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2272
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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