Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0563.Seq
         (608 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g57380.1 68418.m07169 fibronectin type III domain-containing ...    31   0.60 
At3g46120.1 68416.m04991 calcineurin-like phosphoesterase family...    28   4.2  
At1g52940.1 68414.m05987 calcineurin-like phosphoesterase family...    28   4.2  
At4g33630.2 68417.m04778 expressed protein                             28   5.6  
At4g33630.1 68417.m04777 expressed protein                             28   5.6  
At2g18130.1 68415.m02110 purple acid phosphatase (PAP11) identic...    28   5.6  
At1g03080.1 68414.m00282 kinase interacting family protein simil...    27   7.4  
At3g29265.1 68416.m03673 hypothetical protein                          27   9.7  
At1g73290.1 68414.m08481 serine carboxypeptidase S10 family prot...    27   9.7  

>At5g57380.1 68418.m07169 fibronectin type III domain-containing
           protein / PHD finger protein-related contains Pfam
           profiles PF00041: Fibronectin type III domain, PF00628:
           PHD-finger
          Length = 600

 Score = 31.1 bits (67), Expect = 0.60
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 153 DRDRVECCSSLEQESTIKERGLQRQRAKNRLSGRGPLREP 272
           D+D  E CS+ E ES ++E  L +++A N++ GR  L  P
Sbjct: 434 DKDNTEHCSAGEVESELEEERLVKRKA-NKIDGRDLLVTP 472


>At3g46120.1 68416.m04991 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 388

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 202 LKNVDSNVKGRKTVYQGEAHYVNHHPN 282
           L N  SN KG+  ++ G+  Y + HPN
Sbjct: 128 LYNYMSNPKGQAVLFAGDLSYADDHPN 154


>At1g52940.1 68414.m05987 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 396

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 202 LKNVDSNVKGRKTVYQGEAHYVNHHPN 282
           L N  SN KG+  ++ G+  Y + HPN
Sbjct: 136 LYNYMSNPKGQAVLFAGDLSYADDHPN 162


>At4g33630.2 68417.m04778 expressed protein
          Length = 684

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 419 PSARSFRFLPFLSRHVRRLSPSSSKSGAPFRVP 321
           P +++  F P  S    RL+PSS +S  P R+P
Sbjct: 7   PPSQNLAFSPAASATSSRLTPSSKRSFYPHRLP 39


>At4g33630.1 68417.m04777 expressed protein
          Length = 684

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 419 PSARSFRFLPFLSRHVRRLSPSSSKSGAPFRVP 321
           P +++  F P  S    RL+PSS +S  P R+P
Sbjct: 7   PPSQNLAFSPAASATSSRLTPSSKRSFYPHRLP 39


>At2g18130.1 68415.m02110 purple acid phosphatase (PAP11) identical
           to purple acid phosphatase (PAP11) GI:20257484 from
           [Arabidopsis thaliana]
          Length = 441

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 202 LKNVDSNVKGRKTVYQGEAHYVNHHPN 282
           L N  SN KG+  ++ G+  Y + HPN
Sbjct: 156 LYNYMSNPKGQAVLFVGDLSYADDHPN 182


>At1g03080.1 68414.m00282 kinase interacting family protein similar to
            kinase interacting protein 1 (GI:13936326) [Petunia
            integrifolia]
          Length = 1744

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +3

Query: 141  IKRIDRDRVECCSSLEQESTIKERGLQRQRAK 236
            ++ +  + VE C +LE  ST+K+R +++ + +
Sbjct: 1340 LEGLTNELVEACKNLESRSTLKDREIEQLKGR 1371


>At3g29265.1 68416.m03673 hypothetical protein
          Length = 236

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +1

Query: 187 NKSPLLKNVDSNVKGRKTVYQGEAHYVNH--HPNQVFWGRGA 306
           N   L+KN  S   G K   +  A  V +    N++FWGRGA
Sbjct: 118 NSELLIKNHMSRPTGSKAFPEVNALDVKNPLRENKIFWGRGA 159


>At1g73290.1 68414.m08481 serine carboxypeptidase S10 family protein
           similar to serine carboxypeptidase I precursor
           (SP:P07519) [Hordeum vulgare]; glucose acyltransferase
           GB:AAD01263 [Solanum berthaultii]; contains Pfam
           profile: PF00450 Serine carboxypeptidase;
          Length = 438

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 200 SGLLFQTGTTLNPISVYSFDL*GILPISAYWLK 102
           SGLLF+ G     + VY+  L  ++P +  W K
Sbjct: 91  SGLLFENGPLAMKLDVYNGTLPSLVPTTYSWTK 123


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,299,185
Number of Sequences: 28952
Number of extensions: 242458
Number of successful extensions: 514
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)