Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0561.Seq
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   1.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   2.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   3.4  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   5.9  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    21   7.8  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   7.8  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 151 LDLKKPIQKALHLMCAK*SQRNNCSPHR 234
           +DLK+ + +AL   CAK +++   + +R
Sbjct: 58  VDLKRVLPEALQTNCAKCTEKQRTAAYR 85


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 150 TGFEETNTESAPPNVCKVKPTQQLQSPPP 236
           TG    +T ++PP V   K + Q+QS  P
Sbjct: 222 TGIPTPSTSASPPTVNIKKESPQMQSYRP 250


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +2

Query: 425 YGAGSAAPYNYQPPPDMFSSIPSQY 499
           + A ++ P +Y PPP +++   ++Y
Sbjct: 152 HAAATSLPLHYPPPPPVYTHHYARY 176


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +3

Query: 27  VHMSTSNTISPLAADLNLKIASVKKVWEMPAVAENTEE 140
           +H+ST +T SP  A      ++   +W   ++   T E
Sbjct: 193 LHVSTGSTSSPTIASATYTNSANSSIWSPASIDSFTLE 230


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 118 LLRKIRRNYNLLDLKKPIQKALHLMCAK*SQR 213
           LL K R + + L+LKK +  A+   C+K S++
Sbjct: 52  LLEKGRCSPDGLELKKNMPDAIETDCSKCSEK 83


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 588 FSNVCNCEAHYSTNW 632
           F  VC  + ++ST+W
Sbjct: 13  FVGVCTAQLNFSTDW 27


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 419 YQENHQIDLYSDPRKLRKVHPAGEAVEK 336
           Y  +H  D+Y DP K        E V+K
Sbjct: 92  YDLHHNPDIYPDPEKFDPDRFLPENVQK 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,929
Number of Sequences: 336
Number of extensions: 3455
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)