Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0559.Seq
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.1  
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         23   8.1  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         23   8.1  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         23   8.1  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         23   8.1  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   8.1  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   8.1  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +3

Query: 117 SRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPRMVASHHR 278
           SR     +L K + L+    + S      PDSA      ++ R +P +V  HH+
Sbjct: 450 SRPAKSVKLFKPYLLDEEPKQQSQQQ-QRPDSALAEDDKDSTRESPAIVEQHHQ 502


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 342 NTAQYERNRSFGHLVHALGRAAGGAKLPSGDY 247
           N  +  R R+        GRA   AKLP+GD+
Sbjct: 140 NPVKSARIRTISSFNFKYGRAEVRAKLPTGDW 171


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 342 NTAQYERNRSFGHLVHALGRAAGGAKLPSGDY 247
           N  +  R R+        GRA   AKLP+GD+
Sbjct: 140 NPVKSARIRTISSFNFKYGRAEVRAKLPTGDW 171


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 342 NTAQYERNRSFGHLVHALGRAAGGAKLPSGDY 247
           N  +  R R+        GRA   AKLP+GD+
Sbjct: 140 NPVKSARIRTISSFNFKYGRAEVRAKLPTGDW 171


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 342 NTAQYERNRSFGHLVHALGRAAGGAKLPSGDY 247
           N  +  R R+        GRA   AKLP+GD+
Sbjct: 140 NPVKSARIRTISSFNFKYGRAEVRAKLPTGDW 171


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 342 NTAQYERNRSFGHLVHALGRAAGGAKLPSGDY 247
           N  +  R R+        GRA   AKLP+GD+
Sbjct: 158 NPVKSARIRTISSFNFKYGRAEVRAKLPTGDW 189


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 342 NTAQYERNRSFGHLVHALGRAAGGAKLPSGDY 247
           N  +  R R+        GRA   AKLP+GD+
Sbjct: 158 NPVKSARIRTISSFNFKYGRAEVRAKLPTGDW 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 839,217
Number of Sequences: 2352
Number of extensions: 17128
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)