Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0557.Seq
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.49 
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   2.0  
AY062199-1|AAL58560.1|  151|Anopheles gambiae cytochrome P450 CY...    25   2.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.5  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   7.9  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 76  NVGGRVRKISESRSEGPALSPRSAGLSPH-RSAPAMR 183
           N    +RKI  SR      SPRS G  P  RS PA R
Sbjct: 242 NAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARR 278


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
 Frame = -3

Query: 504 HYREHITDSVACWRDGSPSQVGH---ARPHREC 415
           HY +  T  + C     P ++GH   ARP   C
Sbjct: 421 HYAKSCTSEIKCAACNGPHRIGHISCARPAARC 453


>AY062199-1|AAL58560.1|  151|Anopheles gambiae cytochrome P450
           CYP4H19 protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +3

Query: 414 DTRGADVRALPVTVNRRASTPHYL*YVPDSEFELSRPLNVLTNRL 548
           D  G D R +P+T N   + P YL  V      L  P++ +  RL
Sbjct: 40  DVLGVDYRHVPLTYNTLQNFP-YLDMVVKESLRLLPPVSFIGRRL 83


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
 Frame = -2

Query: 283 SRAPPGG----LPDPCWGCLAPHAARLASEARDSTTTSASPERCGE-D*ALPIVVTT 128
           S +P GG     P P     +PH A LA  +  S +T  SP        + PIV T+
Sbjct: 705 SSSPTGGHHLASPSPHHHLTSPHGAPLALTSSKSASTHPSPHPATRASPSSPIVATS 761


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 271 PGGLPDPCWGCLAPH 227
           P  L +PC GC+AP+
Sbjct: 230 PKNLREPCPGCVAPY 244


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +2

Query: 38  PVEPQNRRRRRGSTWEAGCGKYRSHGPKARRCHHDRQG 151
           PV+ Q  +RR    WE G       GP    C   +QG
Sbjct: 408 PVKIQIPKRRCFKCWETGHFSRDCKGPDRTDCDAVKQG 445


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,205
Number of Sequences: 2352
Number of extensions: 14448
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)