Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0556.Seq
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456437-1|CAG30323.1|  863|Homo sapiens dJ1014D13.2 protein.          32   1.6  
AL833860-1|CAD38718.1|  657|Homo sapiens hypothetical protein pr...    32   1.6  
AL022311-1|CAI18864.1|  863|Homo sapiens protein ( Human DNA seq...    32   1.6  
AJ496196-1|CAD42713.1|  863|Homo sapiens molecule interacting wi...    32   1.6  
AB051455-1|BAB33338.1|  791|Homo sapiens KIAA1668 protein protein.     32   1.6  

>CR456437-1|CAG30323.1|  863|Homo sapiens dJ1014D13.2 protein.
          Length = 863

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = +2

Query: 221 LVTYPDVPHHVGESGSAHPWCSVSWTESLTVAVQHWPSLPSMTSCAPKQPRLSKMRPVEF 400
           L T P + H      S HPW  ++ T S     +  P  PS +  A    RLS   P   
Sbjct: 444 LATSPALGHPESTPKSLHPWYGITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPPSA 503

Query: 401 APT 409
            P+
Sbjct: 504 TPS 506


>AL833860-1|CAD38718.1|  657|Homo sapiens hypothetical protein
           protein.
          Length = 657

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = +2

Query: 221 LVTYPDVPHHVGESGSAHPWCSVSWTESLTVAVQHWPSLPSMTSCAPKQPRLSKMRPVEF 400
           L T P + H      S HPW  ++ T S     +  P  PS +  A    RLS   P   
Sbjct: 238 LATSPALGHPESTPKSLHPWYGITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPPSA 297

Query: 401 APT 409
            P+
Sbjct: 298 TPS 300


>AL022311-1|CAI18864.1|  863|Homo sapiens protein ( Human DNA
           sequence from clone RP5-1014D13 on chromosome
           22q13.1-13.2.  ).
          Length = 863

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = +2

Query: 221 LVTYPDVPHHVGESGSAHPWCSVSWTESLTVAVQHWPSLPSMTSCAPKQPRLSKMRPVEF 400
           L T P + H      S HPW  ++ T S     +  P  PS +  A    RLS   P   
Sbjct: 444 LATSPALGHPESTPKSLHPWYGITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPPSA 503

Query: 401 APT 409
            P+
Sbjct: 504 TPS 506


>AJ496196-1|CAD42713.1|  863|Homo sapiens molecule interacting with
           Rab13 protein.
          Length = 863

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = +2

Query: 221 LVTYPDVPHHVGESGSAHPWCSVSWTESLTVAVQHWPSLPSMTSCAPKQPRLSKMRPVEF 400
           L T P + H      S HPW  ++ T S     +  P  PS +  A    RLS   P   
Sbjct: 444 LATSPALGHPESTPKSLHPWYGITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPPSA 503

Query: 401 APT 409
            P+
Sbjct: 504 TPS 506


>AB051455-1|BAB33338.1|  791|Homo sapiens KIAA1668 protein protein.
          Length = 791

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = +2

Query: 221 LVTYPDVPHHVGESGSAHPWCSVSWTESLTVAVQHWPSLPSMTSCAPKQPRLSKMRPVEF 400
           L T P + H      S HPW  ++ T S     +  P  PS +  A    RLS   P   
Sbjct: 372 LATSPALGHPESTPKSLHPWYGITPTSSPKTKKRPAPRAPSASPLALHASRLSHSEPPSA 431

Query: 401 APT 409
            P+
Sbjct: 432 TPS 434


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,892,234
Number of Sequences: 237096
Number of extensions: 2233314
Number of successful extensions: 6093
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6091
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)