Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0553.Seq
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1284|AAF54627.1|  705|Drosophila melanogaster CG6715-PA...    31   1.8  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   4.1  
AY118825-1|AAM50685.1|  625|Drosophila melanogaster GH27705p pro...    29   5.4  
AE014134-2907|AAN11180.1|  625|Drosophila melanogaster CG5758-PC...    29   5.4  
AE014134-2906|AAF53649.1|  625|Drosophila melanogaster CG5758-PB...    29   5.4  
AE014134-2905|AAF53650.1|  625|Drosophila melanogaster CG5758-PA...    29   5.4  
AY069726-1|AAL39871.1| 1122|Drosophila melanogaster LP03102p pro...    29   9.5  
AE013599-3838|AAF47181.1| 1122|Drosophila melanogaster CG3356-PA...    29   9.5  

>AE014297-1284|AAF54627.1|  705|Drosophila melanogaster CG6715-PA
           protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 27/76 (35%), Positives = 35/76 (46%)
 Frame = -2

Query: 387 LSNIATMKRSIQN*TLPIRYNRFDLV*RASGRLGVPRDHEMPVRSNSPTVAAAPAVPYRP 208
           L NI T   +I + TL +  N       ASGR   PR    P   N+PT       P +P
Sbjct: 438 LPNITTPTVTIAHVTLALDKNPPIHSSSASGRPIAPRLANAP---NTPTSTPPTGPPAKP 494

Query: 207 SRKYPHRTLPMYSSTN 160
           +R+ P RT P   +TN
Sbjct: 495 TRRTPART-PARKATN 509


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 24    GFPHCVYVPRAVGPPPHRRPQLTL-VSCQTN 113
             G P C  +P  +G PP+ RP+ T+   C +N
Sbjct: 13071 GVPSCTCLPDFLGAPPNCRPECTISAECPSN 13101



 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 30    PHCVYVPRAVGPPPHRRPQ-LTLVSCQTN 113
             P C  +P  +G PP+ RP+ +T   C TN
Sbjct: 14663 PSCTCLPEYIGAPPNCRPECVTSSECPTN 14691


>AY118825-1|AAM50685.1|  625|Drosophila melanogaster GH27705p
           protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -1

Query: 226 GRPVPTLTKISTPYTTYVLFNKLQVFMINDYITITE 119
           G+P PT+  +S   + Y L N  QVF+I++ + +TE
Sbjct: 349 GQPTPTVNNVSI-MSDYNLSNGNQVFIISEVLFVTE 383


>AE014134-2907|AAN11180.1|  625|Drosophila melanogaster CG5758-PC,
           isoform C protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -1

Query: 226 GRPVPTLTKISTPYTTYVLFNKLQVFMINDYITITE 119
           G+P PT+  +S   + Y L N  QVF+I++ + +TE
Sbjct: 349 GQPTPTVNNVSI-MSDYNLSNGNQVFIISEVLFVTE 383


>AE014134-2906|AAF53649.1|  625|Drosophila melanogaster CG5758-PB,
           isoform B protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -1

Query: 226 GRPVPTLTKISTPYTTYVLFNKLQVFMINDYITITE 119
           G+P PT+  +S   + Y L N  QVF+I++ + +TE
Sbjct: 349 GQPTPTVNNVSI-MSDYNLSNGNQVFIISEVLFVTE 383


>AE014134-2905|AAF53650.1|  625|Drosophila melanogaster CG5758-PA,
           isoform A protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -1

Query: 226 GRPVPTLTKISTPYTTYVLFNKLQVFMINDYITITE 119
           G+P PT+  +S   + Y L N  QVF+I++ + +TE
Sbjct: 349 GQPTPTVNNVSI-MSDYNLSNGNQVFIISEVLFVTE 383


>AY069726-1|AAL39871.1| 1122|Drosophila melanogaster LP03102p
           protein.
          Length = 1122

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 212 DPH-ENIHTVHYLCTLQQTSSIYDQRLHYDY*IIICL 105
           DPH EN H ++ LC +     IY++   ++Y ++  L
Sbjct: 459 DPHIENTHLIYALCEICHNLMIYNKHAVFEYKLLYTL 495


>AE013599-3838|AAF47181.1| 1122|Drosophila melanogaster CG3356-PA
           protein.
          Length = 1122

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 212 DPH-ENIHTVHYLCTLQQTSSIYDQRLHYDY*IIICL 105
           DPH EN H ++ LC +     IY++   ++Y ++  L
Sbjct: 459 DPHIENTHLIYALCEICHNLMIYNKHAVFEYKLLYTL 495


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,538,095
Number of Sequences: 53049
Number of extensions: 469185
Number of successful extensions: 1264
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)