Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0552.Seq
(590 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 30 0.29
SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr 1|||Ma... 28 1.2
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 27 2.0
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 27 2.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 2.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.7
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce... 26 3.6
SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit ... 26 4.7
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 6.2
SPCP31B10.02 |||conserved eukaryotic protein|Schizosaccharomyces... 25 6.2
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 25 6.2
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 25 6.2
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 25 8.3
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 29.9 bits (64), Expect = 0.29
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Frame = +1
Query: 229 QYPSEDGGTSS-CPTSP-------MRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSL 384
++ ED G SS PTSP M + S+ + HH SS A+S TSP P S
Sbjct: 86 KHQQEDSGNSSQSPTSPHPSNQPAMLSPSTAASQHHHHHSS--SSSYAVSPTSPTSPTSS 143
Query: 385 KTTGHNY 405
G N+
Sbjct: 144 GPIGSNF 150
>SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr
1|||Manual
Length = 397
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 266 GQLDVPPSSLGYWN*PSTCKAGSSAPMF 183
G+ +PPSS+GY PS+ G + MF
Sbjct: 133 GEAPLPPSSIGYVLPPSSLANGEGSSMF 160
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 455 NSTRFTELTVFLSKLTE*LWPVVFR 381
N R TE T + L LWP+VFR
Sbjct: 61 NRNRITETTDVMRFLCRELWPIVFR 85
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +1
Query: 265 PT-SPMRTASSLR----DHIYPHHPQFLKSSSALSHTSPPHPHSLKT 390
PT SP RT S +R D + P P S ++ + +PP+P+SLK+
Sbjct: 216 PTRSPARTPSPIRLYSSDALRPQSPL----SPSVEYLTPPNPYSLKS 258
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +1
Query: 196 EEPALQVEGQFQYPSEDGGTSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHP 375
+ P + G S + S SP++T++S + PH S LS+ H
Sbjct: 285 QHPKANISGSLTKSSSESKNLSTIQSPLKTSNSFFKELSPH------SQITLSNVKNNHS 338
Query: 376 H-SLKTTGHNYS 408
H +T H+++
Sbjct: 339 HVGSQTKSHSFA 350
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 2.7
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 1/117 (0%)
Frame = +1
Query: 34 LVTVAVAAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQ 213
+V+ + S + I + S++ S + T + IS + + ++ + ++
Sbjct: 412 IVSTSTLISASDSTSIIVSSYVSTVTQPASTRVQTTTVSSISTSVKQPTASVASSSVSVP 471
Query: 214 VEGQFQYPSEDG-GTSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 381
Q S +SS +SP T S+ + + L SSA+ TS P S
Sbjct: 472 SSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSS 528
>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 481
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 270 IANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPP 377
I +++ P G LP PP I E+I ++ +Y+A P
Sbjct: 23 ITDQSSSVPAGVILP-PPAIREIIDKSASYVARNGP 57
>SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit
Rpn3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 388 TTGHNYSVNLLKKTVNSVNLVEFEMPIYFL 477
TT H + V+ ++K N+V V+F +Y L
Sbjct: 265 TTAHEHLVSAIRKAPNTVYAVQFLEAVYKL 294
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 6.2
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +3
Query: 291 QPQGSHLPTPPPIPEVIQRA--LAYLATAPPQP 383
Q QGS P PPP+P I + + T P P
Sbjct: 350 QVQGSRPPPPPPMPAPIYNVPNVPTVPTVSPNP 382
>SPCP31B10.02 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 143
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 306 HLPTPPPIPEVIQRALAYLATAPPQ 380
HLP PP + +V + + L PPQ
Sbjct: 99 HLPVPPDLAKVSLKETSSLEELPPQ 123
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 22 ILFGLVTVAVAAPQSPTEPIPILKQESSIEP 114
IL ++ A A+P S EP+P + SS +P
Sbjct: 184 ILLDEISTAYASPTSINEPLPDQQLSSSTKP 214
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +1
Query: 385 KTTGHNYSVNLLKKTVNSVNLVEFEMPIYFLTYLSNFRYSFYIFVQNCSIYDVSNKI 555
K G+N + L+ T S + E P L N + + + +YD+SN +
Sbjct: 59 KDDGNNRKLKLIN-TKKSTTICELTFPTPLLAVKLNRKRLLAVLEEQIYVYDISNML 114
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 37 VTVAVAAPQSPTEPIPILKQESSIE 111
VT A P + P+P+ K++SS+E
Sbjct: 49 VTAPAAQPVESSVPLPLPKRKSSVE 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,387,216
Number of Sequences: 5004
Number of extensions: 51124
Number of successful extensions: 188
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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