Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0552.Seq
(590 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0152 - 1211859-1211903,1212247-1212443,1213469-1213532,121... 33 0.13
05_05_0005 + 21442819-21442916,21443053-21443119,21443226-214432... 32 0.39
02_01_0302 - 2021221-2023305 32 0.39
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 28 0.53
11_01_0489 + 3776563-3776692,3776995-3777073,3777532-3777840,377... 30 1.2
09_03_0077 + 12135950-12136135,12136726-12136812 30 1.2
09_03_0041 + 11826788-11828002,11828101-11828563,11828668-118287... 30 1.2
08_02_1012 + 23550314-23551504 29 2.1
04_03_0672 + 18559984-18559986,18560096-18560569,18560666-185608... 29 2.1
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 29 2.1
05_05_0383 + 24551125-24551973 29 2.8
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 29 2.8
11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138... 25 3.3
08_01_1038 + 10540185-10540709 29 3.7
06_01_0944 + 7264833-7265120,7265511-7265600,7265702-7265798,726... 29 3.7
04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733 29 3.7
02_05_0897 + 32603060-32603387,32604348-32604589,32604681-326048... 29 3.7
01_06_0695 - 31292622-31293317 29 3.7
10_08_0218 - 15967064-15967906 28 4.8
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 28 4.8
09_06_0137 - 21080263-21081894 28 6.4
07_03_0890 - 22332768-22333382 28 6.4
07_03_0624 + 20044406-20044756,20045168-20045221 28 6.4
04_04_1354 - 32841778-32841983,32842079-32843093,32843184-328435... 28 6.4
02_04_0192 + 20795659-20796309 28 6.4
01_01_0884 - 6956337-6956431,6956514-6957651 28 6.4
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 27 8.5
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 27 8.5
>03_01_0152 -
1211859-1211903,1212247-1212443,1213469-1213532,
1213630-1213802,1213889-1214075
Length = 221
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 312 PTPPPIPEVIQRALAYLATAPPQP 383
PTPPP+ +RALA A APP+P
Sbjct: 33 PTPPPLAAPSRRALAVRAMAPPKP 56
>05_05_0005 +
21442819-21442916,21443053-21443119,21443226-21443291,
21443368-21443414,21443480-21443543,21443627-21443707,
21443781-21443823,21443912-21443961,21444262-21444343,
21445045-21445120,21445451-21445558,21445782-21445833,
21445911-21446570,21446652-21448067
Length = 969
Score = 31.9 bits (69), Expect = 0.39
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 13/124 (10%)
Frame = +1
Query: 178 LKNIGAE--EPALQVEGQFQYPSEDGGTSSCPTSPMRTASSLRD----HIYPHHPQFLKS 339
LKN G+ EPA Q+ S T S P+S R + + I P
Sbjct: 508 LKNSGSSTPEPAKQIAENGSSASGMSKTKSSPSSSRRPSPQRQTVAGIPIVPFTVSKRAH 567
Query: 340 SSALSHTSPPHP-HSLKTTGHNY------SVNLLKKTVNSVNLVEFEMPIYFLTYLSNFR 498
A S +PP P HS + HN S NL ++ + N P+ F+T S
Sbjct: 568 IKAESEKTPPRPAHSPNNSLHNLPPLIPISTNLSEENIKLGNSQAMPAPLEFVTAASKED 627
Query: 499 YSFY 510
SFY
Sbjct: 628 ISFY 631
>02_01_0302 - 2021221-2023305
Length = 694
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 232 YPSEDGGTSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHS 381
YPS +GG S P+ P S+ P +P SS+ S+ SPP H+
Sbjct: 470 YPSPNGGKPSTPSHPSPPGSTT-----PSYPSPPSSSTTPSYHSPPQGHT 514
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 27.9 bits (59), Expect(2) = 0.53
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 312 PTPPPIPEVIQRALAYLATAPPQP 383
P PPP+P ++ L+ PP P
Sbjct: 516 PPPPPLPNIMSAGFPRLSVPPPLP 539
Score = 22.2 bits (45), Expect(2) = 0.53
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 291 QPQGSHLPTPPPIP 332
Q GS P PPP+P
Sbjct: 477 QAAGSFPPPPPPLP 490
>11_01_0489 +
3776563-3776692,3776995-3777073,3777532-3777840,
3778828-3778898,3778975-3779213,3779306-3779383,
3779734-3780156,3780416-3780661,3780886-3780978,
3781480-3781527
Length = 571
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +1
Query: 64 SPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSE 243
S + P P + Q+ S + QY + + + G+ +G P + Q
Sbjct: 340 SASLPNPNVLQDPSAQLHNFPQYPHSSQPAGTIFPHGSQSGVGIHPP---IVSQLL---- 392
Query: 244 DGGTSSCPTSPMRTASSLRDHIY----PHHPQFLKSSSALSHTSPPHPH 378
G +SS P P+ T+ SL + PHHP+ + + HPH
Sbjct: 393 -GASSSVPPLPLATSGSLISQVQPPFMPHHPRPPAMPAGMQQLPLTHPH 440
>09_03_0077 + 12135950-12136135,12136726-12136812
Length = 90
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 382 GCGGAVARYARARWMTSGIGGGVGK 308
GCGG V R R G GGGVG+
Sbjct: 12 GCGGGVGRKMRTEREELGCGGGVGR 36
>09_03_0041 +
11826788-11828002,11828101-11828563,11828668-11828798,
11829227-11829577,11829723-11829879,11829968-11830260,
11830367-11830426,11830530-11830619,11830774-11830857
Length = 947
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 145 GNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTSSCPTSPMRTASSLRDHIYPH 318
G+G S E G + G E+ L E + S DG S +P +SS+ D + H
Sbjct: 207 GDGASEDEMGLVDGDGDEDEDLGSEEETLSESSDGEFSEDYAAPAANSSSMMDSVLDH 264
>08_02_1012 + 23550314-23551504
Length = 396
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 291 QPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 398
QP+ +PPP+P + A A ++T P +P+ RP
Sbjct: 166 QPRSPRPASPPPVPAAPEVASA-VSTPPARPKRGRP 200
>04_03_0672 +
18559984-18559986,18560096-18560569,18560666-18560836,
18561494-18561640
Length = 264
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 52 AAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNI-GAEEPALQVEGQF 228
A QSP P +QE+ S E G GI +A R + + G+ PA Q
Sbjct: 61 AQGQSPMNPQHGRRQEADPHRRHSLSQQREVGGGIGSAPRSPYRMVHGSASPA-----QP 115
Query: 229 QYPSEDGGTSSCPTSPMRTASS 294
PS+ SS +P R ASS
Sbjct: 116 NNPSKPKHRSSGMQTPERRASS 137
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 312 PTPPPIPEVIQRALAYLATAPPQPENNRP 398
P PPP A +LA + PQP RP
Sbjct: 463 PRPPPTTTTAAAANGHLAASQPQPHRRRP 491
>05_05_0383 + 24551125-24551973
Length = 282
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +1
Query: 247 GGTSSCPTS---PMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPH 378
GG + P S P+R A I P+ P+F SS A + S PH
Sbjct: 11 GGEKATPPSTPPPVRLAGGAAAAIQPNSPRFFFSSLAAASASASSPH 57
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 291 QPQGSHLPTPPPIPEVIQRALAYLATAPPQPEN 389
Q G P+PPPIPE I+ + A P+N
Sbjct: 1196 QDNGHEYPSPPPIPESIELSPHSKALPESSPDN 1228
>11_01_0172 -
1383568-1384440,1385336-1385401,1385470-1385505,
1385604-1385743,1386978-1387134,1387245-1387418,
1387540-1387790,1390296-1390446
Length = 615
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 312 PTPPPIPEVIQRALAYLATAPPQPENNRP 398
P PP +P ++ L+ PP P +P
Sbjct: 540 PPPPLLPNIMSAGFPRLSAPPPLPLPTQP 568
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 291 QPQGSHLPTPPPIP 332
Q GS P PPP+P
Sbjct: 501 QATGSFPPPPPPLP 514
>08_01_1038 + 10540185-10540709
Length = 174
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 376 GGAVARYARARWMTSGIGGG 317
GGA R +RARW S +GGG
Sbjct: 3 GGARWRRSRARWTASPVGGG 22
>06_01_0944 +
7264833-7265120,7265511-7265600,7265702-7265798,
7265927-7265988,7266508-7266596,7266702-7266822,
7266915-7267058,7267492-7267820,7268154-7268394,
7269042-7269245,7271150-7271619,7272703-7272746,
7273121-7273211,7273494-7273596,7273682-7273783,
7274214-7274300,7274421-7274531
Length = 890
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 300 GSHLPTPPPIPEVIQRALAYLATAPP 377
GS P+P +PE+++ A+ AT PP
Sbjct: 641 GSTSPSPDVLPEILRHAVPIKATPPP 666
>04_04_0662 - 27051508-27051828,27051878-27053438,27054333-27054733
Length = 760
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 291 QPQGSHLPTP-PPIPEVIQRALAYLATAPPQPEN 389
QP H P P PP P+ A L PPQP++
Sbjct: 410 QPARQHQPQPTPPPPQAAPIPAAPLQQQPPQPQH 443
>02_05_0897 +
32603060-32603387,32604348-32604589,32604681-32604824,
32604889-32605050,32605129-32605212,32605528-32605601,
32605850-32606039,32606120-32606275,32606368-32606465,
32606976-32607102,32607193-32607292,32607402-32607572,
32607790-32607838,32607912-32608003,32608705-32608774,
32608999-32609023,32609059-32609293,32609425-32609525,
32609614-32609865
Length = 899
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +1
Query: 226 FQYPSEDGGTSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 405
FQ P D G + P MRT R P+ ++ T P PH T G +
Sbjct: 664 FQTPLRDPGATPVPNG-MRTPMPSRAWAPMSPPRLALGWQSMPGTPVPQPHEAPTPGSGW 722
Query: 406 SV 411
+V
Sbjct: 723 AV 724
>01_06_0695 - 31292622-31293317
Length = 231
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 313 PHHPQFLKSSSALSHTSPPHPH 378
P+ P SSS+ S TSP HPH
Sbjct: 16 PNSPSSSTSSSSSSSTSPSHPH 37
>10_08_0218 - 15967064-15967906
Length = 280
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 367 VARYARARWMTSGIGGGVGKCDP*GW 290
VARYA A SG GGG G D GW
Sbjct: 25 VARYASAEGGGSGGGGGGGSEDGSGW 50
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 294 PQGSHLPTPPPIPEVIQRALAYLATAPPQP 383
P +P PPP P + A A + PPQP
Sbjct: 20 PPPVQVPVPPPPPPPLPPAAAAVEPLPPQP 49
>09_06_0137 - 21080263-21081894
Length = 543
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 294 PQGSHLPTPPPIPEVIQRALAYLATAPPQPE 386
P + P+ PP+PE + AL+ L +PP P+
Sbjct: 77 PVPATAPSEPPLPE-LSSALSGLLASPPSPQ 106
>07_03_0890 - 22332768-22333382
Length = 204
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 294 PQGSHLPTPPPIPEVIQRALAYLATAPPQP 383
P P PPP P +RA+ A PP P
Sbjct: 78 PPAEATPPPPPPPPPPERAVPEAADTPPPP 107
>07_03_0624 + 20044406-20044756,20045168-20045221
Length = 134
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Frame = +3
Query: 270 IANENGFQPQGSHLPTP---PPIPE 335
+A E+G Q + SHLP P PPIP+
Sbjct: 44 VAEEDGGQRRRSHLPDPAGGPPIPD 68
>04_04_1354 - 32841778-32841983,32842079-32843093,32843184-32843518,
32843590-32844019,32844155-32844214,32844531-32844651,
32845321-32846132
Length = 992
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +1
Query: 274 PMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGH 399
P R +YP P F + +PPHP T GH
Sbjct: 885 PRRCPPFAGQDLYPWRPPFHANQGPFPRHAPPHPCPPFTPGH 926
>02_04_0192 + 20795659-20796309
Length = 216
Score = 27.9 bits (59), Expect = 6.4
Identities = 26/103 (25%), Positives = 38/103 (36%)
Frame = +1
Query: 67 PTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSED 246
PT P P + S S +S+E GI + ++ + P V G YP
Sbjct: 59 PTSPSPFHRFLPSPLRASSVPFSWEHRPGIPKTPARSSRSSSKQPPPGVVGGGKHYP--- 115
Query: 247 GGTSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHP 375
S P P+ + R P+ + + A S PPHP
Sbjct: 116 ----SAPPLPLPPSLLSRAASDPYASAVVPAEYAASGAMPPHP 154
>01_01_0884 - 6956337-6956431,6956514-6957651
Length = 410
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +3
Query: 279 ENGFQPQGSHLPTPPPIPEVIQ----RALAYLATAPPQP 383
E +P S P+P P P Q A A +A APPQP
Sbjct: 258 ETDLEPDPSPSPSPSPSPAPTQPPTAAAAAAVAPAPPQP 296
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +3
Query: 291 QPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 398
+ + +P PPP P + L+ PP+P P
Sbjct: 895 EKRAPRVPRPPPAPSATANTASALSPPPPRPPGAPP 930
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 222 SIPVPKRGRWYIQLSYIANE-NGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQP 383
S P RW S + G Q Q LP P P+ + LA A APP P
Sbjct: 51 SSTTPTPTRWGAGASAVPPRCPGPQDQHHGLPLPRPVSKSAPMPLASPAAAPPSP 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,379,406
Number of Sequences: 37544
Number of extensions: 400199
Number of successful extensions: 1872
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1860
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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