Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0552.Seq
(590 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.100
SB_16019| Best HMM Match : AT_hook (HMM E-Value=1) 32 0.30
SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_21284| Best HMM Match : F5_F8_type_C (HMM E-Value=1.8e-21) 30 1.2
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_42820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39) 29 2.8
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 29 3.8
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 3.8
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9) 29 3.8
SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_33522| Best HMM Match : SCPU (HMM E-Value=6.8) 28 5.0
SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0) 28 5.0
SB_2431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_670| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7) 28 5.0
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 28 6.6
SB_43092| Best HMM Match : 7tm_1 (HMM E-Value=0.23) 28 6.6
SB_32026| Best HMM Match : GIY-YIG (HMM E-Value=2.3) 28 6.6
SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) 27 8.7
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 27 8.7
SB_36972| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 27 8.7
SB_1349| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 33.9 bits (74), Expect = 0.100
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 313 PHHPQFLKSSSALSHTSPPHPHSL-KTTGHNYSVNLLKKT 429
PHHP L HT+P HPH L K T ++++ L K+T
Sbjct: 237 PHHPLGLSK-----HTAPDHPHGLSKHTAPDHTIGLYKRT 271
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 8/47 (17%)
Frame = +1
Query: 313 PHHPQFLKSSSALSH-------TSPPHPHSL-KTTGHNYSVNLLKKT 429
PHHP L S+A H T+P HPH L K T ++ L K T
Sbjct: 369 PHHPLGLSKSTAPDHPHGVSKRTAPDHPHGLSKHTAPDHPHGLSKHT 415
>SB_16019| Best HMM Match : AT_hook (HMM E-Value=1)
Length = 429
Score = 32.3 bits (70), Expect = 0.30
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Frame = +1
Query: 100 SSIEPDGSYQYSYETGNGISAAERGA---LKNIGAEEPALQVEGQFQYPSEDGGTSSCPT 270
SS PD + Y+ G+G +A GA + + ++ EG S G S+ T
Sbjct: 115 SSASPDSLHVYTSSEGSGGTAVPEGAQGSRRGASSGMGVVEEEGVGMRASRTHGQSTDET 174
Query: 271 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGH 399
S M D P + S+ S++ P L T+GH
Sbjct: 175 SAMECTPERTDTDLPQADSTARPMSS-SNSQNDEPMDLDTSGH 216
>SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +1
Query: 271 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKTVNSVNLV 450
SP T+SS R H +PHH + + T+P P + + H++ + + +++++
Sbjct: 444 SPPSTSSSQRHHHHPHHHHSAIITIHIIITAPSSPSTSSSQRHHHHPHHHHSAITTIHII 503
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +1
Query: 271 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKTVNSVNLV 450
SP T+SS R H +PHH ++ + T+P P + + H++ + +++++
Sbjct: 640 SPPSTSSSQRHHHHPHHYHSAITTINIIITAPSPPSTSSSQRHHHHPYHYHSAITTIHII 699
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +1
Query: 271 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKTVNSVNLV 450
SP T+SS R H +PHH ++ + T+P P + + H++ + + +++++
Sbjct: 54 SPTSTSSSQRYHHHPHHHHSAITTIHIIITAPSPPSTSSSQRHHHHPHHHHSAIITIHII 113
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +1
Query: 259 SCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKTVNS 438
+ P+SP T+SS R H +PHH ++ + T+P P + + H++ + + +
Sbjct: 473 TAPSSPS-TSSSQRHHHHPHHHHSAITTIHIIITAPLSPSTSSSQRHHHHPHHHHSAIIT 531
Query: 439 VNLV 450
++++
Sbjct: 532 IHII 535
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +1
Query: 271 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKTVNSVNLV 450
SP T+SS R H +PHH ++ + T+P P + + H++ + + +++++
Sbjct: 216 SPPSTSSSQRYHHHPHHHHSAITTIHIIITAPSPPSTSSSQRHHHHPHHHHSAIITIHII 275
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 265 PTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKTVNSVN 444
P+SP + S R H +PHH ++ + T+P P + + H++ + + ++N
Sbjct: 607 PSSPSISLSQ-RHHHHPHHHHSAITTIHIIITAPSPPSTSSSQRHHHHPHHYHSAITTIN 665
Query: 445 LV 450
++
Sbjct: 666 II 667
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 271 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 405
SP T+SS R H +PHH ++ + T+P P + H++
Sbjct: 378 SPPSTSSSQRHHHHPHHHHSAITTIHIIITAPSSPSISSSQRHHH 422
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 271 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 405
SP T+SS R H +PHH ++ + T+P P S+ ++ N+
Sbjct: 150 SPPSTSSSQRHHHHPHHHHSAITTIHIIITAPSSP-SISSSQRNH 193
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 271 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 405
SP T+SS R H +PHH ++ + T+P P S+ ++ N+
Sbjct: 312 SPPSTSSSQRHHHHPHHHHSAITTIHIIITAPSSP-SISSSQRNH 355
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 259 SCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 405
+ P+SP T+SS R H +PHH + + T+P P + T +++
Sbjct: 737 TAPSSPS-TSSSERHHHHPHHQHSAIITIHIIITAPSPPSTSSTQRYHH 784
>SB_21284| Best HMM Match : F5_F8_type_C (HMM E-Value=1.8e-21)
Length = 564
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 206 LYRLKVNSSTQARTVVHPVVLHRQ*ERLPASGITFTHTTPNS*SHPARSRIPRHRTPTA* 385
L R + N+S + RT V V + Q +LP S T+ TTP + + R+ R +T T+
Sbjct: 506 LDRPQTNTSAKIRTSVQTVSITAQ--QLPLSAKTYPETTPVFAATDSNGRLDRPQTNTSA 563
Query: 386 K 388
K
Sbjct: 564 K 564
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 274 AM*DNWMYHRPRLGTGIDLQPVKQVLQRRCF*ERLARQRRYHFQSH 137
A+ +W RL G+DLQ V +V RC +R+Y + H
Sbjct: 427 ALSSSWAKRNDRLHQGLDLQIVLRVHHMRCEIPHRCVRRKYRIRRH 472
>SB_42820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 312 PTPPPIPEVIQRALAYL-ATAPPQPENN 392
PTPPP PEVI R+ A L A P P N
Sbjct: 172 PTPPP-PEVIYRSCAELKAARPSTPSGN 198
>SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39)
Length = 258
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 49 VAAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGA 177
++A SPT+P + K E SIEP+ SY S S RGA
Sbjct: 195 LSAEASPTQPT-VRKAEHSIEPNPSYSKSRGKTAQASQHSRGA 236
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 280 RTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTG 396
RT SLR+H P P + + L + PHP+ +G
Sbjct: 1407 RTTESLREHARPLRPLAIGTRVFLQNQQGPHPNKWDRSG 1445
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +1
Query: 325 QFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKTVNS 438
Q++ ++ T+PP+ +L +G+NY++ TV +
Sbjct: 838 QYVHHQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTN 875
>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
Length = 184
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 309 LPTPPPI--PEVIQRALAYLATAPPQPENNRP 398
LPTPPP P+ + L T PP+P RP
Sbjct: 135 LPTPPPPTPPQSTPKPRRVLPTPPPKPPTPRP 166
>SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 148 NGISAAERGA--LKNIGAEEPALQVEGQFQYPSEDGGTSSCPTSPMRTASSLRDHIYPHH 321
NG S +R L N A + EGQ Y + ++ +S + + +++
Sbjct: 106 NGSSKKKRNKKKLNNKEASKEETTKEGQANYFDDSSLSNGATSSQAQDETESTENLLLD- 164
Query: 322 PQFLKSSSALSHTSPPHPHSLKTTG 396
LKS+ A++ +PP P S +T+G
Sbjct: 165 ---LKSTEAVASLAPPSPSSSETSG 186
>SB_33522| Best HMM Match : SCPU (HMM E-Value=6.8)
Length = 295
Score = 28.3 bits (60), Expect = 5.0
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 10/135 (7%)
Frame = +1
Query: 118 GSYQYSYETGNGISAAERGALKNIGAEEP-ALQVEGQFQYPSEDGGTSSCPTSPMRTASS 294
GSYQ+ +G+ A K G ++P A E + P GG + R
Sbjct: 149 GSYQFHVIVEDGLVYLCM-ADKEFGKKDPYAFLEEALYSDPGRAGGDAI--NKVQREVDE 205
Query: 295 LRD----HIYPHHPQFL----KSSSALSHTSPPHPHSLKTTGHNYS-VNLLKKTVNSVNL 447
++D +I P P+ L + H HP+ H Y + + ++NL
Sbjct: 206 VKDVMTKNIGPDLPEALFAPAQEDVVAKHPDVYHPNLRVAHHHRYHRAYCVGRRGQTINL 265
Query: 448 VEFEMPIYFLTYLSN 492
++ + F+TYL N
Sbjct: 266 IKQDFKTLFMTYLGN 280
>SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1433
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +1
Query: 325 QFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKTVNSVNLVEFEMPIYFLTYLSNFRYS 504
QF KS S L+H + +V+ + + L F + FL L RY+
Sbjct: 1190 QFFKSHSILAHLEKVKKNPYANVWFQKAVHWAEAQTTAFALALFATTLKFLRLL---RYN 1246
Query: 505 FYIFVQNCS 531
+I+V NC+
Sbjct: 1247 KHIYVLNCT 1255
>SB_2431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 312 PTPPPIPEVIQRALAYLATAPP 377
PTPPP PEVI R+ A L A P
Sbjct: 15 PTPPP-PEVIYRSCAELKAARP 35
>SB_670| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7)
Length = 224
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 343 SALSHTSPPHPHSLKTTGHNYSVNLLKKTVNS 438
++ T+PP+ +L +G+NY++ TVN+
Sbjct: 182 ASFDQTAPPYQKALDDSGYNYTLRYEPNTVNN 213
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 340 SSALSHTSPPHPHSLKTTGHNYS 408
SS S++ P H HS K+ GH+++
Sbjct: 59 SSVSSYSPPKHKHSSKSNGHHHN 81
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = +1
Query: 133 SYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTSSCPTSPMRTASSLRDHIY 312
S +TG G+ R + E ++ V+G+ + SED G L HI
Sbjct: 1833 SKDTGEGVVGTSREPTRPGSKYEESVSVDGKKKEDSEDSGLVEFGFPRQTGQEPLNFHIK 1892
Query: 313 PHHPQFLKSSSAL 351
H LK S L
Sbjct: 1893 MHDRFVLKQMSKL 1905
>SB_43092| Best HMM Match : 7tm_1 (HMM E-Value=0.23)
Length = 417
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -2
Query: 172 LARQRRYHFQSHKSIGRTHQARCCSPASVSGWVQ*VIGVQLQRPSQV 32
L +R + + S+G HQ+ C +P +SG + G PS +
Sbjct: 242 LTEERPHSSEELPSLGHDHQSDCATPVHLSGNTLNLYGDDTLSPSSI 288
>SB_32026| Best HMM Match : GIY-YIG (HMM E-Value=2.3)
Length = 341
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 331 LKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKTVNS 438
L+ ++ T+PP+ +L +G+NY++ TV +
Sbjct: 72 LQDQASFDQTAPPYQKALDDSGYNYTLRYEPNTVTN 107
>SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 27.9 bits (59), Expect = 6.6
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Frame = +1
Query: 94 QESSIEPDGSYQYSYETGNGISAAERGALKNI----------GAEEPALQV---EGQFQY 234
QE E Y Y NG++ ++RG L + EE A ++ +G Y
Sbjct: 64 QEPDSEQADGYNYDTSHHNGVATSQRGQLARLAMGDNNHVLNACEERACEINHYQGWDYY 123
Query: 235 PS-EDGGTSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSL 384
ED G S + R A +RD +P Q+ H P H HS+
Sbjct: 124 GGVEDDGYES--ENGYRAADGVRDVFHPASTQY--------HVHPVHDHSI 164
>SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)
Length = 264
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 291 QPQGSHLPTPPPIPEVIQRAL-AYLATAPPQP-ENNRP 398
+PQ SH P PP P+ R L ++ P +P E++RP
Sbjct: 151 RPQESHRPLEPPRPQEQHRPLESHRPLEPTRPQESHRP 188
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 226 FQYPSEDGGTSSCPTSPMRTASSLRDHI-YPH---HPQFLK 336
FQ+ E G SSCPT+ + T H+ PH HP F K
Sbjct: 519 FQHTEEHGYLSSCPTN-LGTGMRASVHVKIPHASAHPDFQK 558
>SB_36972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 343 SALSHTSPPHPHSLKTTGHNYSVNLLKKTVNSV 441
++ T+PP+ +L +G+NY++ TV +V
Sbjct: 105 ASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNV 137
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 334 KSSSALSHTSPPHPHSLKTTGHNYSVNLLKKT 429
++SSA+ HT+ PH+ GH S K +
Sbjct: 72 QTSSAICHTTSTQPHTSSAVGHTTSTKPQKSS 103
>SB_1349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 6 HEDLCYSLRTCDGRCSCTPITY*TH-PDT 89
H D S++ C G C C PI TH P T
Sbjct: 65 HADPIKSVQLCRGNCPCGPIRAYTHTPQT 93
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,031,764
Number of Sequences: 59808
Number of extensions: 399755
Number of successful extensions: 1734
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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