Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0552.Seq
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 30 1.1
U70853-6|ABQ13065.1| 185|Caenorhabditis elegans Hypothetical pr... 30 1.4
U70853-4|AAV34789.1| 195|Caenorhabditis elegans Hypothetical pr... 30 1.4
U70853-3|AAK77617.1| 246|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 2.5
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 29 2.5
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 29 2.5
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 29 2.5
Z47808-6|CAA87776.1| 246|Caenorhabditis elegans Hypothetical pr... 28 4.3
U58749-6|AAU05599.2| 276|Caenorhabditis elegans Hypothetical pr... 28 4.3
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 4.3
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 28 4.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 4.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 4.3
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 28 5.7
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 5.7
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 27 7.5
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 27 7.5
AF067936-6|AAC19214.1| 348|Caenorhabditis elegans Ground-like (... 27 7.5
U50300-5|AAC48103.2| 337|Caenorhabditis elegans Serpentine rece... 27 10.0
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 27 10.0
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 10.0
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 10.0
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 273 ANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQ 380
+++ G QPQG + PP P IQ+ + + T P Q
Sbjct: 655 SSQMGVQPQGGMMSRPPSQPHYIQQGPSSMNTPPQQ 690
>U70853-6|ABQ13065.1| 185|Caenorhabditis elegans Hypothetical
protein M01H9.3d protein.
Length = 185
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1
Query: 43 VAVAAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEG 222
V +P SP+ IPI + SI PD ++ + ++ ++ + + + G
Sbjct: 21 VTGGSPHSPSASIPIAGADDSIRPDYDTDCLWKPPTRSARVQKERTISMDSTDSEIGALG 80
Query: 223 QFQYPSEDGGTSSCPTSPM 279
++ S + G S PTSP+
Sbjct: 81 GRKF-STNEGASPAPTSPI 98
>U70853-4|AAV34789.1| 195|Caenorhabditis elegans Hypothetical
protein M01H9.3c protein.
Length = 195
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1
Query: 43 VAVAAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEG 222
V +P SP+ IPI + SI PD ++ + ++ ++ + + + G
Sbjct: 31 VTGGSPHSPSASIPIAGADDSIRPDYDTDCLWKPPTRSARVQKERTISMDSTDSEIGALG 90
Query: 223 QFQYPSEDGGTSSCPTSPM 279
++ S + G S PTSP+
Sbjct: 91 GRKF-STNEGASPAPTSPI 108
>U70853-3|AAK77617.1| 246|Caenorhabditis elegans Hypothetical
protein M01H9.3a protein.
Length = 246
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1
Query: 43 VAVAAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEG 222
V +P SP+ IPI + SI PD ++ + ++ ++ + + + G
Sbjct: 82 VTGGSPHSPSASIPIAGADDSIRPDYDTDCLWKPPTRSARVQKERTISMDSTDSEIGALG 141
Query: 223 QFQYPSEDGGTSSCPTSPM 279
++ S + G S PTSP+
Sbjct: 142 GRKF-STNEGASPAPTSPI 159
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 316 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV---NLLKKTVNSVNLVEFEMP 465
+HP+ SSS+ S T+PPH H L T ++SV + T +VN+ MP
Sbjct: 786 YHPK-APSSSSSSSTNPPHQHQL-THNASFSVTPSSYQIPTSTAVNVTSTGMP 836
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 316 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV---NLLKKTVNSVNLVEFEMP 465
+HP+ SSS+ S T+PPH H L T ++SV + T +VN+ MP
Sbjct: 820 YHPK-APSSSSSSSTNPPHQHQL-THNASFSVTPSSYQIPTSTAVNVTSTGMP 870
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 316 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV---NLLKKTVNSVNLVEFEMP 465
+HP+ SSS+ S T+PPH H L T ++SV + T +VN+ MP
Sbjct: 916 YHPK-APSSSSSSSTNPPHQHQL-THNASFSVTPSSYQIPTSTAVNVTSTGMP 966
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 316 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV---NLLKKTVNSVNLVEFEMP 465
+HP+ SSS+ S T+PPH H L T ++SV + T +VN+ MP
Sbjct: 786 YHPK-APSSSSSSSTNPPHQHQL-THNASFSVTPSSYQIPTSTAVNVTSTGMP 836
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 316 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV---NLLKKTVNSVNLVEFEMP 465
+HP+ SSS+ S T+PPH H L T ++SV + T +VN+ MP
Sbjct: 820 YHPK-APSSSSSSSTNPPHQHQL-THNASFSVTPSSYQIPTSTAVNVTSTGMP 870
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 316 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV---NLLKKTVNSVNLVEFEMP 465
+HP+ SSS+ S T+PPH H L T ++SV + T +VN+ MP
Sbjct: 916 YHPK-APSSSSSSSTNPPHQHQL-THNASFSVTPSSYQIPTSTAVNVTSTGMP 966
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 316 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV---NLLKKTVNSVNLVEFEMP 465
+HP+ SSS+ S T+PPH H L T ++SV + T +VN+ MP
Sbjct: 820 YHPK-APSSSSSSSTNPPHQHQL-THNASFSVTPSSYQIPTSTAVNVTSTGMP 870
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 316 HHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV---NLLKKTVNSVNLVEFEMP 465
+HP+ SSS+ S T+PPH H L T ++SV + T +VN+ MP
Sbjct: 916 YHPK-APSSSSSSSTNPPHQHQL-THNASFSVTPSSYQIPTSTAVNVTSTGMP 966
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 249 WYIQLSYIANENGFQPQGSHLPTPPPIPEVIQRA-LAYLATAPPQPENN 392
WY+ L ++G LP PP+PE + R L+ + QPE +
Sbjct: 153 WYLLLGVAHRKSGLSRLARGLPA-PPLPEGLHRTNLSVIGATSAQPEKS 200
>Z47808-6|CAA87776.1| 246|Caenorhabditis elegans Hypothetical
protein D2013.10 protein.
Length = 246
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 397 HNYSVNLLKKTVNSVNLVEFEMP-IYFLTYLSNFRYSFYIFV 519
+NYSV L V V L F +P FLT LS + + FY+ +
Sbjct: 65 NNYSVVLCGVIVVYVFLQSFAIPGSIFLTILSGYLFPFYVAI 106
>U58749-6|AAU05599.2| 276|Caenorhabditis elegans Hypothetical
protein B0496.3c protein.
Length = 276
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 73 EPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEE---PALQVEGQFQYPSE 243
+P ILK + S + + + SYE NG+ + +++ E+ P QV +
Sbjct: 78 QPRSILKNKQSADIEPRVESSYEPSNGVRSVFERLRRHLSLEKSVSPQRQVASVGPHSRN 137
Query: 244 DGGTSSCPTSPMRTASSL 297
TSS +P + S L
Sbjct: 138 IDSTSSALDNPKKKRSLL 155
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
B0496.3a protein.
Length = 1551
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 73 EPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEE---PALQVEGQFQYPSE 243
+P ILK + S + + + SYE NG+ + +++ E+ P QV +
Sbjct: 1353 QPRSILKNKQSADIEPRVESSYEPSNGVRSVFERLRRHLSLEKSVSPQRQVASVGPHSRN 1412
Query: 244 DGGTSSCPTSPMRTASSL 297
TSS +P + S L
Sbjct: 1413 IDSTSSALDNPKKKRSLL 1430
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
B0496.3b protein.
Length = 1592
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 73 EPIPILKQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEE---PALQVEGQFQYPSE 243
+P ILK + S + + + SYE NG+ + +++ E+ P QV +
Sbjct: 1394 QPRSILKNKQSADIEPRVESSYEPSNGVRSVFERLRRHLSLEKSVSPQRQVASVGPHSRN 1453
Query: 244 DGGTSSCPTSPMRTASSL 297
TSS +P + S L
Sbjct: 1454 IDSTSSALDNPKKKRSLL 1471
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 300 GSHLPTPPPIPEVIQRALAYLATAPPQP 383
G +P PPP P + + LA APP P
Sbjct: 670 GGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 300 GSHLPTPPPIPEVIQRALAYLATAPPQP 383
G +P PPP P + + LA APP P
Sbjct: 670 GGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 276 NENGFQPQGSHLPTPPPIPEVIQ 344
N G QGSHL PPP P+ Q
Sbjct: 737 NTMGHMGQGSHLQGPPPPPQHFQ 759
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 181 KNIGAEEPALQVEGQFQYPSEDG--GTSSCPTSPMRTASSLRDHIYPHHPQFLKSSSA 348
+++G + + + +PS G + T+P + SSL H + HH SSS+
Sbjct: 97 RHLGGGQNSAFMSDSSTHPSSSSLAGLGALATAPSSSQSSLSSHPHQHHNHHSSSSSS 154
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 196 EEPAL-QVEGQFQYPSEDGGTSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPH 372
E P L + E + Q SE T++ ++H PH P + SHT H
Sbjct: 2814 ESPVLSEKEREHQVTSETTTTTTVTREYNDEPEDEQEHQGPHSP------APSSHTEAEH 2867
Query: 373 PHSLKTT 393
PH ++TT
Sbjct: 2868 PHIVETT 2874
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical
protein R06C1.3 protein.
Length = 468
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 312 PTPPPIPEVIQRALAYLATAPPQP 383
P PPP P VI A A A P+P
Sbjct: 360 PPPPPPPMVISSAAASFAAPAPKP 383
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 225 IPVPKRGRWYIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPEN 389
+P K G ++ +G +P + P PPP P LA APPQP+N
Sbjct: 727 MPAEKSGISLGKVVESVEASGNRPSSTPPPPPPPPP---------LAAAPPQPKN 772
>AF067936-6|AAC19214.1| 348|Caenorhabditis elegans Ground-like (grd
related) protein 1 protein.
Length = 348
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 228 PVPKRGRWYIQLSY-IANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENNRP 398
P+P R Y+ + A + F P P P P++IQ AY+ TAPP +P
Sbjct: 166 PLPYRPVPYMPVQLPAACQQYFLPPQRPQPMPQVTPQIIQLPSAYV-TAPPVTIRQQP 222
>U50300-5|AAC48103.2| 337|Caenorhabditis elegans Serpentine
receptor, class t protein18 protein.
Length = 337
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 459 DANLFLNVFK*FQIFFLYFCTELFY 533
D NL++N++ F + CT LFY
Sbjct: 208 DPNLYVNIYHIFNNMMVSICTVLFY 232
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 215 TCKAGSSAPMFLRAPRSAAEIPFPVS*EYW*DPSGSM 105
TC +G+S+ ++ P + P S YW D + +M
Sbjct: 1471 TCFSGASSENYMNLPEVRTALHIPTSLPYWTDCNDNM 1507
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 285 GFQPQGS-HLPTPPPIPEVIQRALAYLATAPP 377
G +P+ S H PTPPP P +Y A APP
Sbjct: 1218 GAKPEASSHAPTPPPQPHP-----SYQAPAPP 1244
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 285 GFQPQGS-HLPTPPPIPEVIQRALAYLATAPP 377
G +P+ S H PTPPP P +Y A APP
Sbjct: 1238 GAKPEASSHAPTPPPQPHP-----SYQAPAPP 1264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,418,387
Number of Sequences: 27780
Number of extensions: 306572
Number of successful extensions: 1380
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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