Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0551.Seq
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.38 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 259 SSPAIFLLLIISTTIPAASRADS*PTRPAAI 167
           S+PA       +TT+PAAS   + P  P+A+
Sbjct: 214 STPATVTTTGATTTLPAASATGTGPATPSAV 244


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 112 EILCVLAVLFTSSIFMLKAALLF 44
           EILC +AVLF +  + L +   F
Sbjct: 6   EILCGIAVLFLALYYYLTSTFDF 28


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -3

Query: 401 LIPLFS*SLCCKLHYQPLDRKEP*FQVPERWQ 306
           LI  FS     K HY   D K   FQV  +W+
Sbjct: 8   LILYFSIVCQAKAHYSLRDFKANIFQVKYQWK 39


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 242 LTSYHIYNYPCSL 204
           +TSYH  N  CSL
Sbjct: 74  ITSYHRINLKCSL 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,355
Number of Sequences: 438
Number of extensions: 3874
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)