Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0550.Seq
(340 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces p... 30 0.11
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 0.59
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 1.8
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 26 1.8
SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces pombe... 26 1.8
SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|c... 25 2.4
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 25 2.4
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 3.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 4.2
SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces pomb... 25 4.2
SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 25 4.2
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 25 4.2
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 24 5.5
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 24 5.5
SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 7.3
SPBC725.10 |||tspO homolog|Schizosaccharomyces pombe|chr 2|||Manual 24 7.3
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 24 7.3
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 24 7.3
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 24 7.3
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 24 7.3
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 24 7.3
SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces ... 23 9.6
SPAC16E8.16 |||transcription factor TFIIB |Schizosaccharomyces p... 23 9.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 23 9.6
>SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 29.9 bits (64), Expect = 0.11
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 46 DQRQMRHVAQHLN*GIQQPFSPAR*PANQSQNQPQRSAN*KANQRPPGADRQMLP 210
D Q++ A+ GIQQP + + + PQ +N ++ QR A + P
Sbjct: 161 DDEQIKKAARAARFGIQQPLASSNNKNHNQSKNPQNRSNSRSKQRNKNAPPKSAP 215
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 0.59
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 146 PSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRC 325
PS P P+S+ A S+PL SV N+ TT + S+ S AT
Sbjct: 283 PSSTPSSTPLSSANSTTATSASSTPLT-SV-NSTTTTSASSTPLSSVSSANSTTATSTSS 340
Query: 326 PPVKT 340
P+ +
Sbjct: 341 TPLSS 345
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 1.8
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPP----IEKPISARQELIARCCHSSPLAESVQNAVTTL 256
+ SSR P+R L +P P PP + P ++ IA + + + + +
Sbjct: 236 IPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Query: 257 PVKAKYASTASQPRRPVATPP 319
+ A+ A+ +RP PP
Sbjct: 296 SSRVSAAALAANKKRPPPPPP 316
Score = 25.0 bits (52), Expect = 3.2
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +2
Query: 146 PSDPPIEKPISARQE--LIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPP 319
P PP P + RQ L + S+P A + P + + PV TPP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 320 RCPP 331
PP
Sbjct: 422 SLPP 425
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 25.8 bits (54), Expect = 1.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 298 PRLAGCRRVFCLHRKSGDGVLDALRQRRTVAASG 197
P + G R FC+ GDG L+ + + A+G
Sbjct: 388 PCINGYFRTFCMEVPRGDGTLEIRGYHKPIMAAG 421
>SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 25.8 bits (54), Expect = 1.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 86 EVSSSRSPQRDSPLISPKINPSDP 157
+V SS++ + + P+ PK+ P+DP
Sbjct: 22 KVDSSKNTEANFPITLPKVLPTDP 45
>SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 2.4
Identities = 13/62 (20%), Positives = 35/62 (56%)
Frame = +2
Query: 125 LISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRP 304
++ P ++ ++PP+ ++A Q+ A P+A ++ +++ P+ A A+ +++P
Sbjct: 145 ILLPVVDEANPPVSPIVTAGQKTFAVRMPQHPVALAL-ISISDSPLAAPSANASTRPSPT 203
Query: 305 VA 310
+A
Sbjct: 204 LA 205
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 25.4 bits (53), Expect = 2.4
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 95 SSRSPQRDS-PLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAK 271
S++ P ++ PL+SP+ IE P+ +++ +E N T+L +K
Sbjct: 93 STKKPHNETEPLLSPQFIDKPSNIETPVKIESPHVSQNNTFQSYSELSPNVETSLTMKTP 152
Query: 272 YASTASQPR 298
A AS P+
Sbjct: 153 PAH-ASTPK 160
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.0 bits (52), Expect = 3.2
Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +1
Query: 25 KPQNHQRDQRQMRHVAQHLN*G-IQQPFSPAR*PANQSQNQPQRSAN*KANQRPPGADRQ 201
+ QNH+ + Q+ H HL+ I P+ P+ + Q + + + + A Q
Sbjct: 287 RQQNHRIETDQLSHFPDHLDPSRIPSPYQPS---SLQPLESRKLHSKVDVHSKKLNALSQ 343
Query: 202 MLPQFAAGGERPERRHHSSGEGKIRVDSQPTEEASCHTATMPTGKN 339
+ P + HHSS + +D+ PT ++ + G++
Sbjct: 344 LNPILRSENVLQNDNHHSS----LSMDNDPTNVSTKNRNNQTVGEH 385
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 24.6 bits (51), Expect = 4.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 28 PQNHQRDQRQMRHVAQHLN*GIQQPFSPAR*PANQS 135
PQ + + + ++A N G Q FSP P N S
Sbjct: 1563 PQEPVQKPQAINNIAPATNLGTSQSFSPRMGPVNNS 1598
>SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 519
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 300 LLGWLAVDAYFAFTGRVVTAFWTLSASGEL 211
L G++ AYF F V+ FW S E+
Sbjct: 231 LSGYIKFWAYFTFIASVLVCFWDESNHQEI 260
>SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 155
Score = 24.6 bits (51), Expect = 4.2
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 67 VAQHLN*GIQQPFSPAR*PANQSQNQPQRSAN*KANQRPPGA 192
V+++L + P+SPA +N QN+ +A N P +
Sbjct: 102 VSENLPEEVPPPYSPAATASNTPQNEASPAATEAVNHERPAS 143
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 24.6 bits (51), Expect = 4.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +2
Query: 56 RCGTLRNI*IEVSSSRSPQRDSPLISPKINPSDPPIEKPISARQE 190
R +R+ +E P + ++PKI+ P KP S E
Sbjct: 379 RANNVRSSFLEAPLPVQPNVQAETVTPKISSKASPFNKPNSVHSE 423
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 24.2 bits (50), Expect = 5.5
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 137 KINPSDPPIEKPIS----ARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRP 304
++ PS PP +KPI+ A + A+ H + + + +N ++L +A P+ P
Sbjct: 453 RLIPSTPPTKKPINAVLDAAKNSAAKDLHLAKMKLNNKNDESSLSPAKSHAVITQAPKIP 512
Query: 305 V 307
+
Sbjct: 513 L 513
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 24.2 bits (50), Expect = 5.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 92 SSSRSPQRDSPLISPKINPSDPPIEKP 172
SSS +P P+ + + P PP+E P
Sbjct: 224 SSSANPVTTPPVNNTLLTPPAPPVELP 250
>SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 527
Score = 23.8 bits (49), Expect = 7.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 271 FCLHRKSGDGVLDAL 227
FC+HR + DGV++ L
Sbjct: 7 FCIHRCTPDGVIEML 21
>SPBC725.10 |||tspO homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 23.8 bits (49), Expect = 7.3
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2
Query: 315 GVATGLLGWLA 283
G+ TGL+GWLA
Sbjct: 119 GILTGLVGWLA 129
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = -1
Query: 313 CGN--WPPRLAGCRRVFCLH 260
C N + P GC VFCLH
Sbjct: 363 CSNVAYKPVRLGCSHVFCLH 382
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 23.8 bits (49), Expect = 7.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 205 LPQFAAGGERPERRHHSSGEGKIRVDSQPTEEASCHTATMPTG 333
+P A RP HH+ G G +V + + E S A + +G
Sbjct: 105 VPNTKAQATRP-LLHHTLGNGDFKVFQRMSSELSADVAFLDSG 146
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 23.8 bits (49), Expect = 7.3
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = +2
Query: 134 PKINPSDPPIEKPISARQELIAR----CCHSSPLAESVQNAVTTLPVKAKYASTA 286
PK NP I +PI A + S+P E +Q ++T PVK TA
Sbjct: 364 PKQNPKSERILEPIIASPKDNTSDKGLLTKSAPTFEELQASITPKPVKTSPNDTA 418
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 23.8 bits (49), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 98 SRSPQRDSPLISPKINPSD-PPIEKPISARQEL 193
S+ Q + P +S +D PP KPISA EL
Sbjct: 742 SKKKQTEIPPVSSSPPHNDAPPKAKPISAPSEL 774
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 23.8 bits (49), Expect = 7.3
Identities = 28/112 (25%), Positives = 37/112 (33%), Gaps = 7/112 (6%)
Frame = +1
Query: 25 KPQNHQR----DQRQMRHVAQHLN*GIQQPFSP---AR*PANQSQNQPQRSAN*KANQRP 183
K NH R D RH + P SP A PA ++Q + S N +
Sbjct: 42 KDSNHDRRTSTDTTHSRHRYPETPPSLPPPPSPGILATSPAVLQKHQQEDSGNSSQSPTS 101
Query: 184 PGADRQMLPQFAAGGERPERRHHSSGEGKIRVDSQPTEEASCHTATMPTGKN 339
P Q + HHSS + PT T++ P G N
Sbjct: 102 PHPSNQPAMLSPSTAASQHHHHHSSSSSYAVSPTSPTSP----TSSGPIGSN 149
>SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 571
Score = 23.4 bits (48), Expect = 9.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 122 GYLAGENGCWIPQFRC 75
GYL NG W P +C
Sbjct: 275 GYLNQRNGVWGPNLQC 290
>SPAC16E8.16 |||transcription factor TFIIB |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 340
Score = 23.4 bits (48), Expect = 9.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 161 IEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVA 310
I+ ++ ++L+ R C+ L SVQ+A L +A T + R P++
Sbjct: 225 IQSSSTSAEDLMVRFCNRLMLPMSVQSAAAELARRAGLQGTLA-GRSPIS 273
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 23.4 bits (48), Expect = 9.6
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = +2
Query: 101 RSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVK---AK 271
R+P + S N S PP + ++ Q +P + + + + P + A+
Sbjct: 461 RTPAKSSEEAKSTTNDSSPPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAE 520
Query: 272 YASTASQPRRPVATP 316
Y T PR + P
Sbjct: 521 YRDTPDTPRNIMPLP 535
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,589,293
Number of Sequences: 5004
Number of extensions: 30600
Number of successful extensions: 101
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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