Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0550.Seq
(340 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0058 + 13015401-13016654 38 0.002
11_04_0025 + 12382485-12382823,12382835-12382894,12382960-123830... 36 0.008
11_04_0195 - 14725553-14725571,14725988-14726079,14727214-147273... 32 0.100
05_01_0192 + 1394342-1396645 32 0.100
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 31 0.23
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241... 31 0.30
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616... 31 0.30
02_01_0059 + 430227-430268,430347-430724 31 0.30
07_03_1482 - 26864793-26865043,26865325-26865454,26865564-268657... 30 0.53
05_03_0491 + 14682895-14683365,14684127-14684656,14684739-14685213 30 0.53
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 30 0.53
02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166... 29 1.2
09_06_0228 + 21706118-21706252,21706327-21706406,21706742-217068... 28 1.6
08_01_0007 - 57681-57728,58260-58336,58418-58464,58808-58908,590... 28 1.6
04_03_0768 - 19396146-19396607,19397855-19398175,19398424-193995... 28 1.6
11_06_0610 - 25449085-25453284 28 2.1
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 28 2.1
04_04_1012 - 30104401-30104955,30105066-30106841 28 2.1
04_04_1005 - 30043698-30044252,30044363-30046138 28 2.1
03_02_0435 - 8406262-8406419,8406499-8406547,8406577-8407458,840... 28 2.1
03_01_0476 - 3660327-3661261,3661401-3661668 28 2.1
02_03_0126 - 15536727-15537353 28 2.1
01_01_0595 - 4430738-4430785,4430904-4432679 28 2.1
08_01_0437 + 3850137-3850581,3851134-3851159 27 2.8
07_01_0533 + 3942813-3943164,3943244-3943458 27 2.8
05_06_0152 - 26008495-26009074,26010555-26011361,26016536-260166... 27 2.8
02_01_0085 + 610872-611297 27 2.8
12_01_0367 - 2783507-2784490 27 3.8
10_08_0127 - 15010125-15011068,15011328-15011835 27 3.8
09_06_0224 + 21661317-21661386,21663735-21663865,21663904-216639... 27 3.8
06_03_1294 - 29080347-29081447 27 3.8
03_02_0504 - 8976973-8979414 27 3.8
03_01_0170 + 1389759-1391159 27 3.8
02_04_0203 - 20888010-20888162,20888242-20888469,20888969-208890... 27 3.8
02_02_0584 - 11853149-11853573,11853673-11853787,11853868-118539... 27 3.8
11_01_0530 - 4164590-4165264,4165378-4165467,4167482-4168011,416... 27 5.0
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082... 27 5.0
03_05_0736 - 27254502-27255497 27 5.0
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708... 27 5.0
12_02_1174 - 26696869-26698191 26 6.6
10_08_0492 + 18292208-18292248,18292874-18293365,18294139-182943... 26 6.6
08_02_1470 - 27350173-27350643,27350721-27351167 26 6.6
08_02_1411 + 26880766-26880911,26881000-26881097,26881207-268812... 26 6.6
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 26 6.6
04_04_0976 + 29839697-29840350 26 6.6
04_01_0034 - 401208-402923 26 6.6
03_05_0543 - 25404630-25405408,25405461-25405605 26 6.6
03_05_0019 + 19862171-19863049 26 6.6
03_02_0080 + 5498638-5498699,5499121-5499190,5499551-5500711,550... 26 6.6
02_04_0103 - 19768288-19768737 26 6.6
10_08_0518 + 18486315-18486462,18486495-18486712,18486763-184868... 26 8.7
09_04_0260 - 16197522-16197669,16198027-16198130,16198508-161987... 26 8.7
09_03_0088 - 12242020-12242941,12243467-12243550,12243591-12244438 26 8.7
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 26 8.7
05_03_0439 + 14028234-14028287,14029394-14029468,14029562-140296... 26 8.7
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 26 8.7
04_03_0060 - 10511421-10512494 26 8.7
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 26 8.7
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 26 8.7
03_01_0515 - 3864796-3865425 26 8.7
03_01_0210 + 1652040-1652186,1652446-1652853 26 8.7
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479... 26 8.7
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 26 8.7
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 26 8.7
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 26 8.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 23 8.8
>12_02_0058 + 13015401-13016654
Length = 417
Score = 38.3 bits (85), Expect = 0.002
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +2
Query: 83 IEVSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCH--SSPLAESVQNAVTTL 256
+ V ++ +P R P+++ + P PP+ I+ + R + P A+ ++ V+
Sbjct: 178 LPVPAAPAPPRQVPVVTQQAPPPPPPLVPVITQDAPPLKRPAPVAAPPCAKKMRGDVSAF 237
Query: 257 PVKAKYASTASQPR---RPVATPPRCPPVKT 340
PV + S + PR R VA PPR PP++T
Sbjct: 238 PVVRQ--SCVAAPRCAPRVVAPPPRHPPIQT 266
>11_04_0025 +
12382485-12382823,12382835-12382894,12382960-12383073,
12383187-12383837
Length = 387
Score = 35.9 bits (79), Expect = 0.008
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 86 EVSSSRSPQRDSPLISPKINPSDPPIEKPISARQEL-IARCCHSSPLAESVQNAVTTLPV 262
+ ++ S R +P SPK P P P+ R+ L + C+ + S N V
Sbjct: 62 QAAAEASDTRKTPSASPKRTPPTP--SAPLLKRKHLSLILFCNYFTHSRSFINLKKKTVV 119
Query: 263 KAKYASTASQPRRPVATPPRCP 328
K K A+ AS+P P PP P
Sbjct: 120 KKKLAAAASKPAPPHPPPPSSP 141
>11_04_0195 -
14725553-14725571,14725988-14726079,14727214-14727335,
14727588-14727597,14727798-14727896,14728046-14728612
Length = 302
Score = 32.3 bits (70), Expect = 0.100
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 95 SSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNA 244
+S S + ++ P P+ PI ISAR+ C H S LA SV +A
Sbjct: 124 NSTSASDGAGVVCPSARPTASPISSSISARRIPSLLCNHDSGLASSVYHA 173
>05_01_0192 + 1394342-1396645
Length = 767
Score = 32.3 bits (70), Expect = 0.100
Identities = 24/68 (35%), Positives = 31/68 (45%)
Frame = +2
Query: 92 SSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAK 271
SSS SP + SP ++ PS PP E P+S+ A P + TT P +
Sbjct: 249 SSSSSPSKPSPRMA---TPSSPPPEAPVSSAAPPPASLNPMLPSPPQLPGVSTTTP--SP 303
Query: 272 YASTASQP 295
AST S P
Sbjct: 304 PASTVSMP 311
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 31.1 bits (67), Expect = 0.23
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +1
Query: 109 PAR*PANQSQNQPQRSAN*KANQRPPGADRQMLPQFAAGGERPERRHHSSGEGKIRVDSQ 288
P + P + QPQ AN +R P +R+ AA + HH+ E K S+
Sbjct: 173 PHQPPPRREAPQPQ-VANAAVAERRPLREREEAAAAAAAAAKRIHDHHTPAESKAEAASE 231
Query: 289 PTEEASCHT 315
P A H+
Sbjct: 232 PQVSAGDHS 240
>10_08_0765 - 20421813-20423174,20423591-20423771,20423862-20424117,
20424768-20425095,20425218-20426156,20427015-20427761,
20428517-20428789
Length = 1361
Score = 30.7 bits (66), Expect = 0.30
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 130 QSQNQPQRSAN*KANQRPPGADRQMLPQFAAGGERPERRHHSSGEGKIRVDSQPTEEAS- 306
Q + QRSA+ AN+ G+ R + AAG RP R H G G R + +
Sbjct: 902 QRNQREQRSAH-NANRWSSGSSRHDI--IAAGNSRPMRWSHFPGSGNTRRSNGHDSRLNV 958
Query: 307 CHT 315
CHT
Sbjct: 959 CHT 961
>07_03_0697 +
20759176-20759817,20760592-20760708,20761422-20761696,
20761906-20762068,20762293-20762421,20762989-20763713,
20763853-20764081
Length = 759
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 130 QSQNQPQRSAN*KANQRPPGADRQMLPQFAAGGERPERRHHSSGEGK 270
+S ++ +R ++RP +D P+ A G + ++R H GEG+
Sbjct: 18 KSNSKEERKHKKGKHERPAASDEAPTPRSDAKGSKGKKRKHKDGEGE 64
>02_01_0059 + 430227-430268,430347-430724
Length = 139
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 169 ANQRPPGADRQMLPQFAAGGERPERRHHSSGEGKIRVDSQPTEEASC 309
+ Q PP R AAG + R HH G+G++R + C
Sbjct: 37 SRQEPPRCQRGQWSVAAAGKDFAGRNHHGIGKGRLRCSAAEVGRPRC 83
>07_03_1482 -
26864793-26865043,26865325-26865454,26865564-26865771,
26867529-26867599,26867875-26867884,26869562-26870310
Length = 472
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 196 RQMLPQFAAGGERPERRHHSSGEGKIRV 279
R++L F A RP RR H EGK RV
Sbjct: 3 RRVLAGFRALHPRPRRRRHGGAEGKARV 30
>05_03_0491 + 14682895-14683365,14684127-14684656,14684739-14685213
Length = 491
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 220 RRTVAASGDQLLAGADWLFNWRIAGVDFGT 131
R V + D LAGAD++ N R+ GVDF +
Sbjct: 297 RLRVNPNADVALAGADFVRNHRVLGVDFAS 326
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.9 bits (64), Expect = 0.53
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +2
Query: 122 PLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRR 301
P SP+ P P ++ P+ +EL S + + + P KA S A P
Sbjct: 95 PRRSPREKPC-PTMQPPVKPPEELSPVGAPRSRVRAMPPSPSLSPPAKAPSHSHAKTPSM 153
Query: 302 PVATPPRCPPVK 337
P A P PP K
Sbjct: 154 PPAERPALPPTK 165
Score = 27.9 bits (59), Expect = 2.1
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 92 SSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAK 271
S S SP +P S PS PP E+P + A ++P S NA +T
Sbjct: 133 SPSLSPPAKAPSHSHAKTPSMPPAERPALPPTKAPAAISPATPPQLSPANAHSTHHHAKP 192
Query: 272 YASTASQPRRPVATP-PRCPP 331
+ ++P PV +P P PP
Sbjct: 193 PSLPPAEP--PVPSPSPEHPP 211
>02_05_0110 +
25914110-25915006,25915726-25915797,25916411-25916699,
25916864-25916949,25917267-25917490,25917674-25917740,
25917830-25917889,25917995-25918078,25918475-25918555
Length = 619
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 46 DQRQMRHVAQHLN*GIQQP-FSPAR*PANQSQNQPQRSAN*KANQRPPGADRQMLPQFAA 222
D R M+ + LN IQ+P S + P++ +QPQ KA + P + + +
Sbjct: 180 DPRMMQVLGLMLNIKIQRPEASESSQPSSSPPSQPQEQPEAKAREVEPEPEPEPMEVTDE 239
Query: 223 GGERPERRHHSSGE 264
ER ER+ + E
Sbjct: 240 EKERKERKSSAQKE 253
>09_06_0228 +
21706118-21706252,21706327-21706406,21706742-21706866,
21706960-21707084,21707162-21707380,21707458-21707580,
21707661-21707761,21707847-21707899,21707972-21708174
Length = 387
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 338 FLPVGIVAVWQLASSVGWLSTRILPSPEEW 249
F+P+ I + ++GW++ RIL P+ +
Sbjct: 74 FMPINIGITFMAGGTLGWIACRILKPPQHF 103
>08_01_0007 -
57681-57728,58260-58336,58418-58464,58808-58908,
59016-59108,59418-59540,59637-59755,60154-60510,
60888-61011
Length = 362
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 119 SPLISPKINPSDPPIEKPISARQE 190
SP ++P I PPIE PISA+++
Sbjct: 173 SPSMAPNICTHMPPIEGPISAKED 196
>04_03_0768 -
19396146-19396607,19397855-19398175,19398424-19399569,
19400073-19400855,19402114-19402149
Length = 915
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +1
Query: 64 HVAQHLN*GIQQPFSPAR*PANQSQNQPQRSAN*KANQRPPGADRQMLPQFAAGGERPER 243
H++ L + QP S R N P+ S+ A PG +MLP + P+
Sbjct: 560 HMSAALANSVPQPSSSNRGKENLQSATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDT 619
Query: 244 RHHSSGE 264
+ S E
Sbjct: 620 KRQESLE 626
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +2
Query: 95 SSRSPQRDSPLISPKINPSDPPIEK--PISARQELIARCCHSSPLAESVQNAVTTLPVKA 268
S+ P++ P +P IN S P E+ P S + S P V++ + +
Sbjct: 989 STPPPEKPLPPHTPTINSSPPSEEEYMPPSPVKSSPPPAEKSQPPPSPVESVLPPVKSSP 1048
Query: 269 KYASTASQPRRPVATPPRCP 328
+A S+P ++PP+ P
Sbjct: 1049 PHAPVISEPPPTKSSPPQVP 1068
Score = 26.2 bits (55), Expect = 6.6
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = +2
Query: 104 SPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYAST 283
SP + P S PP EKP+ I +SSP +E + + PVK+
Sbjct: 974 SPPSHEEYVPPSPAKSTPPPEKPLPPHTPTI----NSSPPSE--EEYMPPSPVKSSPPPA 1027
Query: 284 ASQPRRPVATPPRCPPVKT 340
P PPVK+
Sbjct: 1028 EKSQPPPSPVESVLPPVKS 1046
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 98 SRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYA 277
SRSP+R SP+ + + P+ + S R+ + R SP + V+ V + P +A+
Sbjct: 254 SRSPRRRSPVKTTSSHRERSPVRRNGSPRRSPV-RSIGRSPQRDRVKEQVRS-PKQAQSR 311
Query: 278 STASQPRR 301
S + P R
Sbjct: 312 SRSPSPAR 319
>04_04_1012 - 30104401-30104955,30105066-30106841
Length = 776
Score = 27.9 bits (59), Expect = 2.1
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +2
Query: 107 PQRDSP---LISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKY- 274
PQ DSP + SP + P + +++A S + Q A + P+
Sbjct: 574 PQIDSPPPRVTSPAL-AQGPVVPTGAMEIDDIVAPPPPSPVATQLAQAAASASPISTGVL 632
Query: 275 -ASTASQPRRPVATPPRCPP 331
A AS P+ +A+PPR PP
Sbjct: 633 DALFASPPQPIIASPPRSPP 652
>04_04_1005 - 30043698-30044252,30044363-30046138
Length = 776
Score = 27.9 bits (59), Expect = 2.1
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +2
Query: 107 PQRDSP---LISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKY- 274
PQ DSP + SP + P + +++A S + Q A + P+
Sbjct: 574 PQIDSPPPRVTSPAL-AQGPVVPTGAMEIDDIVAPPPPSPVATQLAQAAASASPISTGVL 632
Query: 275 -ASTASQPRRPVATPPRCPP 331
A AS P+ +A+PPR PP
Sbjct: 633 DALFASPPQPIIASPPRSPP 652
>03_02_0435 -
8406262-8406419,8406499-8406547,8406577-8407458,
8408976-8409127,8410346-8410616
Length = 503
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 109 PAR*PANQSQNQPQRSAN*KA-NQRPPGADRQMLPQFAA---GGERPERRHHSSGEGKIR 276
P + A S ++P A A N + P R L FA GG+ R S EGK++
Sbjct: 164 PLQLVATPSVHKPLFHAEWNAENYKSPSPTRYWLQVFAQDSQGGKTSSERRPFSVEGKVQ 223
Query: 277 VDSQP 291
+ S+P
Sbjct: 224 IQSRP 228
>03_01_0476 - 3660327-3661261,3661401-3661668
Length = 400
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 124 ANQSQNQPQRSAN*KANQRPPGADRQMLPQFAAGGERPERRHHSSGEGKIRVDSQPTEEA 303
A + + + A +A +R A + A GER H S +GK +V+ E+A
Sbjct: 120 AKEKTKEAAKGAAGEATRRAEQAKHKTKEAAEAAGERGAEVHEQSKQGKAKVEETAKEKA 179
>02_03_0126 - 15536727-15537353
Length = 208
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 202 MLPQFAAGGERPERRHHSSGEGKIRVDSQPTEEASCHTATMP 327
+LP G P RR G+GK++ S +EA+ AT P
Sbjct: 161 ILPPALGGSGGPGRRA-KGGKGKVKPKSSDADEAAAKPATEP 201
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 143 NPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPR 322
+PSDP + ++ C+ +PLA + + V A+ S+ +P PPR
Sbjct: 417 DPSDPIVF--CDGCDLMVHASCYGNPLASFIPDGDWFCSVCTAAAAKKSKGNKPPPPPPR 474
Query: 323 C 325
C
Sbjct: 475 C 475
>08_01_0437 + 3850137-3850581,3851134-3851159
Length = 156
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = -1
Query: 313 CGNWPPRLAGCRRVFCLHRKSGDGVLDALRQRRTVAASGDQLLAGA 176
CG PP G V+CLH+ S A R+RR +ASGD + GA
Sbjct: 19 CG--PPM--GRTMVWCLHQDSVQRCAHA-RRRRRPSASGDGIGVGA 59
>07_01_0533 + 3942813-3943164,3943244-3943458
Length = 188
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 54 PDAARCATSELRYPAAVLPSEIAR*SVPKSTPA 152
P A++C+T + P+ P+ A +VP TPA
Sbjct: 111 PPASQCSTVGVPMPSPATPATPAAPAVPSETPA 143
>05_06_0152 -
26008495-26009074,26010555-26011361,26016536-26016657,
26016860-26017462
Length = 703
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +2
Query: 194 IARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRC 325
IAR P + + A TLP A PR P A PP C
Sbjct: 525 IARREDGEPEPKLCRPAAPTLPFPALLRHLPCSPRSPSAQPPLC 568
>02_01_0085 + 610872-611297
Length = 141
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = +2
Query: 221 LAESVQNAVTTLPVKAKYASTASQ-----PRRPVATPPRCPPV 334
LA Q +T P + ST RRP A PPR PPV
Sbjct: 37 LASCPQLPITAAPAVTRARSTPDSCAWGAERRPHAPPPRLPPV 79
>12_01_0367 - 2783507-2784490
Length = 327
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 318 GGVATGLLGWLAVDAYFAFTGRVVTAFWTLSASGELWQHLAISSW 184
G V + +L L A A G +AF L+A E W+ L +++W
Sbjct: 30 GDVLSLVLRRLDDGASLAALGCACSAFRELAADAETWRGLCLATW 74
>10_08_0127 - 15010125-15011068,15011328-15011835
Length = 483
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 83 IEVSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIA 199
+ ++ +R P ++ SDPPIE P+ +EL A
Sbjct: 243 LRIARARVPPLAIEARRVRVTASDPPIEDPLEGVRELFA 281
>09_06_0224 +
21661317-21661386,21663735-21663865,21663904-21663983,
21664248-21664372,21664745-21664830,21664932-21665168,
21665261-21665380,21665502-21665602,21665655-21665758,
21665851-21666047
Length = 416
Score = 27.1 bits (57), Expect = 3.8
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = -3
Query: 338 FLPVGIVAVWQLASSVGWLSTRILPSPEEW 249
F+PV I + + ++GW++ +IL P+ +
Sbjct: 96 FMPVNIGITFIVGGTLGWIACKILKPPQHF 125
>06_03_1294 - 29080347-29081447
Length = 366
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 200 RCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRCP 328
RC SP+A S + T+ P+ + + AS RRP PP CP
Sbjct: 100 RCSAPSPVASS---SSTSTPMGSHWWWPAS--RRPPIIPPSCP 137
>03_02_0504 - 8976973-8979414
Length = 813
Score = 27.1 bits (57), Expect = 3.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 146 PSDPPIEKPISARQEL--IARCCHSSPLAESV-QNAVTTLPVKAKY--ASTASQPRRPVA 310
PS P ++ + E+ I SP+A + Q A + P+ A AS P+ +A
Sbjct: 623 PSPPAVQVVPTGAMEIDDIVAPPPPSPVATQLAQAAASASPISTGVLDALFASPPQPIIA 682
Query: 311 TPPRCPP 331
+PPR PP
Sbjct: 683 SPPRSPP 689
>03_01_0170 + 1389759-1391159
Length = 466
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 54 PDAARCATSELRYPAAVLPSEIAR*SVPKSTP 149
PD+ CA++ LR PA LPS A + P+ TP
Sbjct: 48 PDSG-CASTRLRSPAPTLPS-AASSAAPQPTP 77
>02_04_0203 -
20888010-20888162,20888242-20888469,20888969-20889073,
20889148-20889225,20889308-20889382,20890037-20890123,
20890216-20890283,20890396-20890483,20890583-20890683,
20890793-20890913,20891008-20891169,20891271-20891441
Length = 478
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 122 PLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKA 268
P SP PS PP +SA CC +S +++ + P KA
Sbjct: 11 PAASPSPAPSPPPPRPRVSAAAAASFPCCSTSAGGLRLRSRPSRFPQKA 59
>02_02_0584 -
11853149-11853573,11853673-11853787,11853868-11853981,
11854049-11854108,11854265-11854600,11854681-11854724,
11854776-11855507,11855736-11855921,11856012-11856153,
11856250-11856300
Length = 734
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 260 VKAKYASTASQPRRPVATPPRCPPVK 337
VK K A+T S+P P +PP PPV+
Sbjct: 503 VKKKSAATTSKPASP-PSPPPSPPVQ 527
>11_01_0530 -
4164590-4165264,4165378-4165467,4167482-4168011,
4168094-4168603,4172207-4172432
Length = 676
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 95 SSRSPQRDSPLISPKINPSDPPI-EKPISARQELIARCCHSSPLAESVQNAV 247
S+ +P+ S L + ++P + K ++A + +I C +SP+ + QNA+
Sbjct: 186 SAAAPELSSELNAAGVSPLYLAVMSKSVTAVKAIITTCSDASPVGPNKQNAL 237
>05_05_0201 +
23206859-23206998,23207858-23207936,23208121-23208219,
23208561-23208674,23208762-23208910,23209010-23209091,
23209170-23209255,23209520-23209750,23209830-23210727
Length = 625
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 104 SPQRDS-PLISPKINPSDPPIEKP 172
+P++D P PKI PS PPI P
Sbjct: 285 TPRKDEIPREDPKIKPSAPPIAPP 308
>03_05_0736 - 27254502-27255497
Length = 331
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 213 VRRWRRASRTPSPLFR*RQNTRRQPANRGG 302
V RWRR R + R + RR P R G
Sbjct: 271 VLRWRRTGRWDGAVHRAAEEARRHPQRRRG 300
>03_02_0283 -
7078754-7078856,7079358-7079431,7079995-7080090,
7080145-7080270,7080856-7080939,7081458-7081506,
7081630-7081688,7081908-7081925,7082141-7082620
Length = 362
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 212 SSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRCPP 331
S P + + LP +A A+ AS PRR A+P PP
Sbjct: 13 SPPAPAAAAASPQPLP-RAFLAAAASSPRRAAASPAPAPP 51
>12_02_1174 - 26696869-26698191
Length = 440
Score = 26.2 bits (55), Expect = 6.6
Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Frame = +2
Query: 107 PQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAE--SVQNAVTTLPVKAKYAS 280
PQ L P P PP +P S + ++ P + S T P K
Sbjct: 146 PQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPV 205
Query: 281 TASQPRRPVATPPRCPP 331
+P+ P PP PP
Sbjct: 206 VQPKPQPPPTLPPPSPP 222
>10_08_0492 +
18292208-18292248,18292874-18293365,18294139-18294319,
18294388-18294442,18294473-18294592,18295335-18295465,
18295691-18295891
Length = 406
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 146 PSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQ 292
P PP P S+ +L+A S+PL + V++L + +T+SQ
Sbjct: 3 PPPPPSPSPSSSSDKLVAGAAQSAPLVPLQEPDVSSL--GESFDTTSSQ 49
>08_02_1470 - 27350173-27350643,27350721-27351167
Length = 305
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 242 AVTTLPVKAKYASTASQPRRPVATPPRCPPVK 337
A+ + K K A+ A RP PPR PP +
Sbjct: 208 ALDAIRAKTKKAAAAPPKARPPHLPPRPPPAQ 239
>08_02_1411 +
26880766-26880911,26881000-26881097,26881207-26881274,
26881595-26881683,26881786-26882007,26883056-26883790,
26883880-26884078,26884319-26884404,26886175-26886536,
26887290-26887921
Length = 878
Score = 26.2 bits (55), Expect = 6.6
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 131 SPKINPSDPPIEKPISARQELIAR---CCHSSPLAESVQNAVTTLPVKAKYASTASQPRR 301
SP + +PP P+S A HS+ LAE V++AV + +STA++
Sbjct: 588 SPPRHDDEPPPPPPLSPAVTGGAHGGAAWHSTVLAEDVESAVIVAALTHVISSTAAEV-- 645
Query: 302 PVATPP 319
A PP
Sbjct: 646 TTAVPP 651
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 248 TTLPVKAKYASTASQPRRPVATPPRCPP 331
T +P A A + P RPV PP PP
Sbjct: 203 TAMPPMAAPAPPQTNPPRPVRPPPPPPP 230
>04_04_0976 + 29839697-29840350
Length = 217
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 251 W*RRSGRSPPAANCGSIWRSAPGGR 177
W RR R PP + CG +RS+ G R
Sbjct: 177 WQRR--RPPPPSRCGKSYRSSQGRR 199
>04_01_0034 - 401208-402923
Length = 571
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 24 QTTKSPAGSAPDAARCATSELRYPAAVLPS 113
Q + + S PD R +TS LR AAV P+
Sbjct: 140 QPLRDLSRSLPDTPRASTSSLRPAAAVAPT 169
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 188 ELIARCCHSSPLAESVQNAVT-TLPVKAKYASTASQPRRPVATPPRCPP 331
+L A C A+ A+T TLP K T S PV PP+ PP
Sbjct: 86 QLPADCNVDGIRAKFENEALTITLPKKTPSPLTPSPTPSPVTPPPQQPP 134
>03_05_0019 + 19862171-19863049
Length = 292
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +2
Query: 209 HSSPLAESVQNAVTTLPVKA----KYASTASQPRRPVAT--PPRCPPVKT 340
H P A + +V TLP++A + TA+ P P A PP PP T
Sbjct: 135 HPPPGATAAAASVCTLPMRAEDLFRTKPTAAAPATPPAAKRPPEPPPKTT 184
>03_02_0080 +
5498638-5498699,5499121-5499190,5499551-5500711,
5500940-5501029,5501147-5501464
Length = 566
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 247 HHSSGEGKIRVDSQPTEEASCHTATMPTGK 336
H S+G+ K S P + A T T+PTGK
Sbjct: 501 HCSNGKAKKGGASTPKKAAHRRTTTVPTGK 530
>02_04_0103 - 19768288-19768737
Length = 149
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 140 INPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPP 319
++P PP+ + ++R E A L Q+A + + A S S+ RR +PP
Sbjct: 13 LSPIHPPLHQQAASRGEPRAS------LMSGPQSATAVIVIAAAPRSRMSRCRRREPSPP 66
Query: 320 RCPP 331
PP
Sbjct: 67 PLPP 70
>10_08_0518 +
18486315-18486462,18486495-18486712,18486763-18486808,
18487436-18487709,18487797-18488052
Length = 313
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 208 PQFAAGGERPERRHHSSGE 264
PQFA P RR SSGE
Sbjct: 33 PQFALPARAPRRRRRSSGE 51
>09_04_0260 -
16197522-16197669,16198027-16198130,16198508-16198719,
16198795-16198900,16199006-16199119,16199200-16199417,
16199837-16199900,16199982-16200335,16200609-16200767,
16201486-16202907
Length = 966
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 268 CLHRKSGDGVLDALRQRRTVAASGD 194
C + G G+ + + RTVAA GD
Sbjct: 325 CKESQEGPGLCSLISEERTVAAEGD 349
>09_03_0088 - 12242020-12242941,12243467-12243550,12243591-12244438
Length = 617
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 325 ASWRCGNWPPRLAGCRRV 272
A WR PPR+AGC V
Sbjct: 238 AQWRPSQIPPRVAGCCHV 255
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFN 161
L +LRQR T A SG+ L G DWL N
Sbjct: 145 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 175
>05_03_0439 +
14028234-14028287,14029394-14029468,14029562-14029642,
14029778-14029934,14030056-14030060,14030152-14030226,
14030332-14030457,14030604-14030822,14031293-14031406,
14031498-14031533,14031630-14031764
Length = 358
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 333 TGGHRGGVATGLLGWLAVDA 274
TGG GG A L+GW DA
Sbjct: 278 TGGMMGGHAVKLIGWGTTDA 297
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 25.8 bits (54), Expect = 8.7
Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Frame = +2
Query: 86 EVSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVK 265
EV P DSP + + S PP P AR + +P V P+
Sbjct: 106 EVEEIEDPDGDSPFVDAPEHISPPP-PPPPPARTPMPTPTPTPTPTPTRPPVPVWAAPLP 164
Query: 266 AKYAS-TASQPRRPVATPPRCPP 331
A+ + T S P R A P P
Sbjct: 165 ARTPTPTPSAPPRAAAPSPAGTP 187
>04_03_0060 - 10511421-10512494
Length = 357
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 116 DSPLISPKINPSDPPIEKPISARQELIARCCHSS 217
D P+ S +NP+D E S L +RCC +S
Sbjct: 247 DRPVGSISVNPADDLREPDESETGGLRSRCCRAS 280
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 245 VTTLPVKAKYASTASQPRR--PVATPPRCP 328
+TTL ++ A+QP P +PPRCP
Sbjct: 101 MTTLALQCVAKDAAAQPEMSWPRGSPPRCP 130
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 56 RCGTLRNI*IEVSSSRSPQRDSPLISPKIN 145
RCG LR +E ++SRS + SP+ + +N
Sbjct: 226 RCGKLRPSDVEFNTSRSNEAISPIGASLVN 255
>03_01_0515 - 3864796-3865425
Length = 209
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Frame = +2
Query: 104 SPQRDSPLISPKINPSDPPIEKPISARQE----LIARCCHSSPLAESVQNAVTTLPVKAK 271
SP+ ++ SP S PP+ P S P SV ++ P+
Sbjct: 32 SPEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPP 91
Query: 272 YASTASQPRRPVATPPRCPPVKT 340
A+ P P +PP PVK+
Sbjct: 92 PPPPAASPPPPPPSPPPPSPVKS 114
>03_01_0210 + 1652040-1652186,1652446-1652853
Length = 184
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/67 (23%), Positives = 25/67 (37%)
Frame = +1
Query: 121 PANQSQNQPQRSAN*KANQRPPGADRQMLPQFAAGGERPERRHHSSGEGKIRVDSQPTEE 300
PA+ N + + ++ P GA +L AA G R+ G R P +
Sbjct: 103 PAHPVSNASESESEQPSSCSPSGATPLLLAAAAAAGSNHTERYDDEGRASARPPPPPPPQ 162
Query: 301 ASCHTAT 321
+ AT
Sbjct: 163 LAVGGAT 169
>02_04_0625 -
24547435-24547569,24547674-24547742,24547871-24547997,
24548086-24548209,24548714-24548832,24548953-24549044,
24549124-24549329,24549429-24549534,24549636-24549740,
24549836-24549942,24550030-24550253,24550341-24550468,
24550945-24551022,24551338-24552012,24552655-24552798,
24552985-24553064,24553958-24554029,24554124-24554343,
24554460-24554590,24555118-24555243,24555567-24555695,
24556156-24556318,24556408-24556545,24557198-24557317,
24557521-24557682,24557751-24557876,24558172-24558342,
24558435-24558590,24559061-24559408
Length = 1526
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 134 PKINPSDPPIEKPISARQEL 193
PK+ S P + KP S RQE+
Sbjct: 880 PKVAKSSPKLSKPASERQEV 899
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 31 QNHQRDQRQMRHVAQHLN*GIQQPFSPAR*PANQSQNQPQRSAN*KANQRPPGADRQMLP 210
Q Q+ Q+Q + Q L QQ + Q QNQPQ S+ ++ Q ++Q +
Sbjct: 60 QQQQKLQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQNQPQHSSQ-QSQQTTTLRNQQQIS 118
Query: 211 Q 213
Q
Sbjct: 119 Q 119
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFN 161
L +LRQR T A SG+ L G DWL N
Sbjct: 151 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 181
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 37 HQRDQRQMRHVAQHLN*GIQQPFSPAR*PANQSQNQPQR 153
HQ+ Q+Q H QH + IQ + A Q Q Q Q+
Sbjct: 87 HQKQQQQQYHHQQHQHQQIQMQQMLLQRAAQQQQQQQQQ 125
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 23.0 bits (47), Expect(2) = 8.8
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 116 DSPLISPKINPSDPPIEKP 172
DSP P + PS PP P
Sbjct: 1152 DSPPCQPPLPPSPPPATPP 1170
Score = 21.0 bits (42), Expect(2) = 8.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 293 PRRPVATPPRCPPV 334
P P ATPP PP+
Sbjct: 1162 PSPPPATPPPPPPL 1175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,226,443
Number of Sequences: 37544
Number of extensions: 278863
Number of successful extensions: 1298
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -