Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0550.Seq
(340 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.052
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 31 0.28
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 0.37
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 30 0.49
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 29 0.85
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 29 0.85
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z99271-1|CAB16471.1| 663|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 27 2.6
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 27 2.6
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z48009-2|CAA88077.1| 230|Caenorhabditis elegans Hypothetical pr... 27 3.4
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 3.4
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 27 3.4
Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical pr... 27 4.5
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 27 4.5
AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical... 27 4.5
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 27 4.5
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 26 6.0
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend... 26 6.0
AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transpo... 26 6.0
AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA transcri... 26 6.0
AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transpor... 26 6.0
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 26 6.0
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 26 6.0
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z68748-2|CAA92955.3| 374|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z48585-9|CAD59166.1| 347|Caenorhabditis elegans Hypothetical pr... 26 7.9
U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein. 26 7.9
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 26 7.9
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 26 7.9
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 26 7.9
AL032639-7|CAA21631.2| 465|Caenorhabditis elegans Hypothetical ... 26 7.9
AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical ... 26 7.9
AF305937-1|AAG37064.1| 348|Caenorhabditis elegans NADH pyrophos... 26 7.9
AC084155-6|AAK84607.1| 609|Caenorhabditis elegans Hypothetical ... 26 7.9
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 33.1 bits (72), Expect = 0.052
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Frame = +2
Query: 32 KITSGISARCGTLRNI*IEVSSSRSPQRD-SPLISPK-INPSDPPIEKPISARQELIARC 205
K T+ IS T+ + + + +PQ SP +P S P KP+ +
Sbjct: 516 KQTNTISPHLSTITGSIVTSTPTMAPQTSASPTTTPTHTTASQPTTTKPVVTTNSVTPST 575
Query: 206 CHSS---PLAESVQNAVTTLPV-KAKYASTASQPRRPVATPPRCPPVKT 340
++ P TT PV K S+ +Q PV TP PPV T
Sbjct: 576 GTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTT 624
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 30.7 bits (66), Expect = 0.28
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 13 FINAKPQNHQRDQRQMRHVAQHLN*GIQQPFSPAR*PANQSQNQPQRSAN*KANQRPPGA 192
F N + N Q Q+ + Q +QQP P + P SQ P++ A A RP A
Sbjct: 518 FYNQQQYNAQTPQQVQQVHQQTPQQQVQQPHQPNQQPHIPSQQLPRQQAPQPAQNRPSAA 577
Query: 193 DRQMLPQ 213
+ + Q
Sbjct: 578 QQVVFQQ 584
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 30.3 bits (65), Expect = 0.37
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +2
Query: 146 PSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRP 304
PS P+E+ S Q I SSP A S+ + +TLPV +S S P P
Sbjct: 1603 PSYFPVEQSKSVTQAPIPPA--SSPSAPSIPSIPSTLPVAPSSSSVPSSPSAP 1653
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 3 FLRIHQCQTTKSPAGSAPDAARCATSELRYPAAV-LPSEIAR*SVP 137
F++IH+ +T +P+ ++P + + PA+V +PS +VP
Sbjct: 384 FVQIHETETPSAPSPASPSSVSVTIPRVALPASVSVPSPSPASNVP 429
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical
protein R11F4.3 protein.
Length = 418
Score = 29.9 bits (64), Expect = 0.49
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 206 CHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPR---CPPV 334
C+ PLA+ Q P ++K + P P+ PPR PP+
Sbjct: 123 CNQLPLAQQRQLLTAIAPARSKTVPDLATPELPIPQPPRFAEVPPI 168
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 29.1 bits (62), Expect = 0.85
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 127 NQSQNQPQRSAN*KANQRPPGADRQMLPQFAAGGERPERRHHSSGE---GKIRVDSQPTE 297
+++ +P + K N +P D LP+ + E HHS+ E KI+V S P
Sbjct: 662 SKAPQEPSKPVETKENNKPALTDDFPLPEPLPQKPKIETNHHSAVEKDAEKIKVRSPPVV 721
Query: 298 EASCHTATMPT 330
AS P+
Sbjct: 722 VASSPAPAAPS 732
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 29.1 bits (62), Expect = 0.85
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 127 NQSQNQPQRSAN*KANQRPPGADRQMLPQFAAGGERPERRHHSSGE---GKIRVDSQPTE 297
+++ +P + K N +P D LP+ + E HHS+ E KI+V S P
Sbjct: 564 SKAPQEPSKPVETKENNKPALTDDFPLPEPLPQKPKIETNHHSAVEKDAEKIKVRSPPVV 623
Query: 298 EASCHTATMPT 330
AS P+
Sbjct: 624 VASSPAPAAPS 634
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 136 QNQPQRSAN*KANQRPPGADRQMLPQFAAG 225
Q+ PQ RPPGA+ QM P + AG
Sbjct: 82 QHHPQHPGMPPMEWRPPGAEYQMPPGYPAG 111
>Z99271-1|CAB16471.1| 663|Caenorhabditis elegans Hypothetical
protein Y43F4A.1a protein.
Length = 663
Score = 27.9 bits (59), Expect = 2.0
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 134 PKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTT--LPVKAKYASTASQPRRPV 307
P +P+ PP+EK R +L + AE VQN V T LP Y A + RP+
Sbjct: 55 PSSDPTSPPVEKFAPLRIQLHYDKSIQNLTAE-VQNFVNTTLLPEAVGYWENALRV-RPM 112
Query: 308 ATPPR 322
TP R
Sbjct: 113 TTPIR 117
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.9 bits (59), Expect = 2.0
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 104 SPQRDSPLISP-KINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYAS 280
+P + SP K+ + PP+EKP++ +SPL V + L K +
Sbjct: 501 TPPAPPAIPSPAKLPTAPPPVEKPVTPSPS-------ASPLPSPVSSPAPQLVQKPTTPT 553
Query: 281 TASQPRRPVATPPRCP 328
AS+P VA PP P
Sbjct: 554 DASKPF--VAQPPFAP 567
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 106 SPAR*PANQSQNQ-PQRSAN*KANQRPPGADR-QMLPQFAAGGERPERRHHSSGEGKIR 276
S +R P +S+++ P RS + A +R PG+DR + A+ +R ++R S + + R
Sbjct: 189 SRSRSPRRRSRSRSPTRSRSPPARRRSPGSDRSDRKSRSASPKKRSDKRARSESKSRSR 247
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/55 (21%), Positives = 26/55 (47%)
Frame = +2
Query: 131 SPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQP 295
+P+ + + P+++ ++ Q + S+P + S N+ P Y S S+P
Sbjct: 500 TPRSSSQNAPVQEEATSHQSTSSEPASSAPNSNSSPNSSGMSPAVTSYLSNISEP 554
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAV 247
+ +P S SP S P E+ I EL+A+C S P S+++++
Sbjct: 101 IRKPETPSEPSREASPAPRLSSP-FERIIDETTELLAKCASSGPPDHSLRSSI 152
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 283 CRRVFCLHRKSGDGVLDA 230
CR VF L K GDG +DA
Sbjct: 10 CREVFMLFDKKGDGKIDA 27
>Z48009-2|CAA88077.1| 230|Caenorhabditis elegans Hypothetical
protein AH6.3 protein.
Length = 230
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 104 SPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYAST 283
S + SPL PK P +KP + E A P ++ V A P +K ++
Sbjct: 33 STESVSPLNEPKPPPQSAVPQKPAAPAAEEKAPVDPKDPKSKDVDEAKKPDPANSKKSNK 92
Query: 284 ASQPRR 301
+ +P +
Sbjct: 93 SKKPEK 98
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 248 TTLPV-KAKYASTASQPRRPVATPPRCPPVKT 340
TT PV K S+ +Q PV TP PPV T
Sbjct: 537 TTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTT 568
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 19 NAKPQNHQRDQRQMRHVAQHLN*GIQQPF-SPAR*PANQ-SQNQPQRS 156
N +PQ Q+ Q+Q++ Q +QQP +P R P Q S QP +S
Sbjct: 96 NQQPQGAQQPQQQVQQQVQQPQQPVQQPQPTPIRPPQPQRSGQQPVQS 143
>Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 235 PERRHHSSGEGKIR----VDSQPTEEASCHTATMPTGKN 339
P+RRHH+ E K+R +D P + H T+PT ++
Sbjct: 539 PDRRHHTDEEHKVREVEQLDRLPRQHRP-HCHTVPTTRH 576
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 101 RSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYAS 280
R+P R+SPL P P P P + + +A + SV+ ++ P ++ A+
Sbjct: 77 RTPSRNSPLTPPTKTPPHTPTRTPTT--ESPVAPRTPGKVVISSVEKQESSAPDESTIAA 134
Query: 281 T 283
T
Sbjct: 135 T 135
>AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 235 PERRHHSSGEGKIR----VDSQPTEEASCHTATMPTGKN 339
P+RRHH+ E K+R +D P + H T+PT ++
Sbjct: 539 PDRRHHTDEEHKVREVEQLDRLPRQHRP-HCHTVPTTRH 576
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 26.6 bits (56), Expect = 4.5
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +2
Query: 92 SSSRSPQRDSPLISPKINPSDPPIEK--PISARQELIARCCHSSPLAES---VQNAVTTL 256
SSS SP + + +P+ ++PP P+ + P + S VQ TT
Sbjct: 182 SSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTA 241
Query: 257 PVKAKYASTASQPRRPVATPPRCPPVKT 340
P S +S PV T P T
Sbjct: 242 PETTSTESPSSS-TTPVQTTTTTAPETT 268
Score = 26.2 bits (55), Expect = 6.0
Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Frame = +2
Query: 92 SSSRSPQRDSPLISPKINPSDPPIEK--PISARQELIARCCHSSPLAESVQNAVTTLPVK 265
SSS SP + + + +P+ ++PP P+ + P + S TT
Sbjct: 803 SSSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTA 862
Query: 266 AKYAST--ASQPRRPVATPPRCPPVKT 340
+ ST S PV T P T
Sbjct: 863 PETTSTEPPSSSTTPVQTTTITAPETT 889
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.2 bits (55), Expect = 6.0
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 88 GIQQPFSPAR*PANQSQNQP-QRSAN*KANQRPPGADRQMLPQFAAGGERPE 240
G Q PF P PAN +Q+ P R+A ++ + ++R QF+A E E
Sbjct: 979 GSQDPFHPGMNPANFAQHAPGVRNAIARSGSQTDNSERY---QFSARWEEDE 1027
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 26.2 bits (55), Expect = 6.0
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 88 GIQQPFSPAR*PANQSQNQP-QRSAN*KANQRPPGADRQMLPQFAAGGERPE 240
G Q PF P PAN +Q+ P R+A ++ + ++R QF+A E E
Sbjct: 979 GSQDPFHPGMNPANFAQHAPGVRNAIARSGSQTDNSERY---QFSARWEEDE 1027
>Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical protein
F52B5.1 protein.
Length = 1119
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/72 (23%), Positives = 25/72 (34%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKA 268
V S S RD P S + D PIE+P ++ + SP + P+
Sbjct: 1046 VDSKNSLVRDVPASSDPTSSRDAPIEQPEDDDDPIMIKVIRPSPHTSTSNLTTENTPLLK 1105
Query: 269 KYASTASQPRRP 304
+ P P
Sbjct: 1106 DEEPPKTNPDEP 1117
>Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical
protein K02B9.4 protein.
Length = 226
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 146 PSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTL 256
P DP + +P ++ + A CH + + + + TTL
Sbjct: 127 PQDPLVAEPKPMKKRMAAVQCHQNSICSNCKTRETTL 163
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 26.2 bits (55), Expect = 6.0
Identities = 22/92 (23%), Positives = 41/92 (44%)
Frame = +2
Query: 14 SSMPNHKITSGISARCGTLRNI*IEVSSSRSPQRDSPLISPKINPSDPPIEKPISARQEL 193
S +P +T G + G+L + I +S+ + +PLIS K P P PI+ +
Sbjct: 157 SRIPQAIVTGGTN---GSLPPLLISPTSAAAA---TPLISGKAGPMSPSTGSPINVAATV 210
Query: 194 IARCCHSSPLAESVQNAVTTLPVKAKYASTAS 289
+ S + ++ + +P AS++S
Sbjct: 211 LQNAVSSPQHSIFDRSRLNKIPPNTSLASSSS 242
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 26.2 bits (55), Expect = 6.0
Identities = 22/92 (23%), Positives = 41/92 (44%)
Frame = +2
Query: 14 SSMPNHKITSGISARCGTLRNI*IEVSSSRSPQRDSPLISPKINPSDPPIEKPISARQEL 193
S +P +T G + G+L + I +S+ + +PLIS K P P PI+ +
Sbjct: 157 SRIPQAIVTGGTN---GSLPPLLISPTSAAAA---TPLISGKAGPMSPSTGSPINVAATV 210
Query: 194 IARCCHSSPLAESVQNAVTTLPVKAKYASTAS 289
+ S + ++ + +P AS++S
Sbjct: 211 LQNAVSSPQHSIFDRSRLNKIPPNTSLASSSS 242
>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
chloride bicarbonateanion exchanger alternative variant a
protein.
Length = 1161
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/72 (23%), Positives = 25/72 (34%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKA 268
V S S RD P S + D PIE+P ++ + SP + P+
Sbjct: 1088 VDSKNSLVRDVPASSDPTSSRDAPIEQPEDDDDPIMIKVIRPSPHTSTSNLTTENTPLLK 1147
Query: 269 KYASTASQPRRP 304
+ P P
Sbjct: 1148 DEEPPKTNPDEP 1159
>AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transporter
ABTS-1 protein.
Length = 1119
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/72 (23%), Positives = 25/72 (34%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKA 268
V S S RD P S + D PIE+P ++ + SP + P+
Sbjct: 1046 VDSKNSLVRDVPASSDPTSSRDAPIEQPEDDDDPIMIKVIRPSPHTSTSNLTTENTPLLK 1105
Query: 269 KYASTASQPRRP 304
+ P P
Sbjct: 1106 DEEPPKTNPDEP 1117
>AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA
transcription factor ELT-3 protein.
Length = 226
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 146 PSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTL 256
P DP + +P ++ + A CH + + + + TTL
Sbjct: 127 PQDPLVAEPKPMKKRMAAVQCHQNSICSNCKTRETTL 163
>AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transporter
protein.
Length = 1119
Score = 26.2 bits (55), Expect = 6.0
Identities = 17/72 (23%), Positives = 25/72 (34%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKA 268
V S S RD P S + D PIE+P ++ + SP + P+
Sbjct: 1046 VDSKNSLVRDVPASSDPTSSRDAPIEQPEDDDDPIMIKVIRPSPHTSTSNLTTENTPLLK 1105
Query: 269 KYASTASQPRRP 304
+ P P
Sbjct: 1106 DEEPPKTNPDEP 1117
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 239 SGRSPPAANCGSIWRSA 189
SGR PP N GS WR A
Sbjct: 190 SGRIPPEENVGSDWRYA 206
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 239 SGRSPPAANCGSIWRSA 189
SGR PP N GS WR A
Sbjct: 89 SGRIPPEENVGSDWRYA 105
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 203 CCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRCPP 331
C SP + PV + S + P PVA PRCPP
Sbjct: 226 CSGISPSTRVPPPIPSRAPVMSPVQSPLTHP--PVAPMPRCPP 266
>Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 161 IEKPISARQELIARCCHSSPLAESVQNAVTTL 256
IE A Q++ +CC +PL ES + T+
Sbjct: 119 IEPETDAFQDVAYQCCTYAPLRESTDRNIATV 150
>Z68748-2|CAA92955.3| 374|Caenorhabditis elegans Hypothetical
protein F13H10.2 protein.
Length = 374
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 122 PLISPKINPSDPPIEKPISARQEL 193
PL I+ +DPP + PIS ++ L
Sbjct: 112 PLFGTSIDAADPPEDSPISKKEVL 135
>Z48585-9|CAD59166.1| 347|Caenorhabditis elegans Hypothetical
protein ZK673.11a protein.
Length = 347
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 92 SSSRSPQRDSPLISPKINPSDPPIEKP 172
SS SP +P SP PS+ P KP
Sbjct: 187 SSGFSPMLPAPTYSPPSLPSESPASKP 213
>U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein.
Length = 550
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 161 IEKPISARQELIARCCHSSPLAESVQNAVTTL 256
IE A Q++ +CC +PL ES + T+
Sbjct: 119 IEPETDAFQDVAYQCCTYAPLRESTDRNIATV 150
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 25.8 bits (54), Expect = 7.9
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2
Query: 86 EVSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVK 265
+VS RS + L S K+ P P + P + + + A +++ +
Sbjct: 1432 DVSLQRSMENLHKLES-KVKPQPPYPQTPTKKSNLMKKKTGKNESSASHPSSSLQSSRHS 1490
Query: 266 AKYASTASQPRRPVATP 316
+K+AS A+ PR ATP
Sbjct: 1491 SKFASKATTPRTGDATP 1507
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 214 TVAASGDQLLAGADWLFN 161
T A SGD L G DWL N
Sbjct: 158 TCATSGDGLYEGLDWLSN 175
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 203 CCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRCPP 331
C SP + PV + S + P PVA PRCPP
Sbjct: 226 CSGISPSTRVPPPIPSRAPVMSPVQSPLTHP--PVAPMPRCPP 266
>AL032639-7|CAA21631.2| 465|Caenorhabditis elegans Hypothetical
protein Y38F1A.6 protein.
Length = 465
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 17 SMP-NHKITSGISARCGTLRNI*IEVSSSRSPQRDSPLISPKINPSDP 157
SMP N I SG C L + RSP+ ++P + P S+P
Sbjct: 227 SMPRNVAIYSGFDVLCHALESFTALPFDQRSPRPENPGVRPLYQGSNP 274
>AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 161 IEKPISARQELIARCCHSSPLAESVQNAVTTL 256
IE A Q++ +CC +PL ES + T+
Sbjct: 119 IEPETDAFQDVAYQCCTYAPLRESTDRNIATV 150
>AF305937-1|AAG37064.1| 348|Caenorhabditis elegans NADH
pyrophosphatase protein.
Length = 348
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 122 PLISPKINPSDPPIEKPISARQEL 193
PL I+ +DPP + PIS ++ L
Sbjct: 86 PLFGTSIDAADPPEDSPISKKEVL 109
>AC084155-6|AAK84607.1| 609|Caenorhabditis elegans Hypothetical
protein Y45G5AM.8 protein.
Length = 609
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +2
Query: 140 INPSDPPIEKPISARQELIARCCHSSPLAESVQNAVT 250
+NP P +++P + ++ S+P++E++ +A+T
Sbjct: 493 VNPISPRMDEPALLEENWNSKPTWSNPISENIADALT 529
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,181,363
Number of Sequences: 27780
Number of extensions: 190749
Number of successful extensions: 837
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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