Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0550.Seq
(340 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 37 0.003
At2g22720.3 68415.m02692 expressed protein 35 0.016
At2g22720.2 68415.m02691 expressed protein 35 0.016
At2g22720.1 68415.m02693 expressed protein 35 0.016
At3g36659.1 68416.m00783 invertase/pectin methylesterase inhibit... 33 0.037
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 33 0.049
At3g30230.1 68416.m03820 myosin heavy chain-related similar to M... 32 0.11
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 31 0.20
At3g61850.2 68416.m06946 Dof zinc finger protein DAG1 / Dof affe... 31 0.26
At3g61850.1 68416.m06945 Dof zinc finger protein DAG1 / Dof affe... 31 0.26
At5g67170.2 68418.m08468 SEC-C motif-containing protein / OTU-li... 29 0.60
At5g67170.1 68418.m08467 SEC-C motif-containing protein / OTU-li... 29 0.60
At3g44200.1 68416.m04739 protein kinase family protein contains ... 29 0.79
At3g01700.1 68416.m00103 arabinogalactan-protein (AGP11) identic... 29 1.0
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 28 1.8
At3g61390.2 68416.m06872 U-box domain-containing protein several... 28 1.8
At3g22790.1 68416.m02873 kinase interacting family protein simil... 28 1.8
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 1.8
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 2.4
At1g02310.1 68414.m00176 glycosyl hydrolase family protein 5 / c... 27 2.4
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 27 3.2
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 27 3.2
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 27 3.2
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 27 3.2
At5g63380.1 68418.m07955 4-coumarate--CoA ligase family protein ... 27 4.2
At5g12220.1 68418.m01434 las1-like family protein similar to Las... 27 4.2
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 27 4.2
At3g10985.1 68416.m01326 wound-responsive protein-related simila... 27 4.2
At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein ... 26 5.6
At4g07430.1 68417.m01140 hypothetical protein similar to At2g108... 26 5.6
At4g07310.1 68417.m01115 hypothetical protein similar to At2g108... 26 5.6
At3g32150.1 68416.m04094 hypothetical protein 26 5.6
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 26 5.6
At5g54590.2 68418.m06797 protein kinase family protein contains ... 26 7.4
At5g44680.1 68418.m05474 methyladenine glycosylase family protei... 26 7.4
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 26 7.4
At4g28810.1 68417.m04119 expressed protein PMID: 12679534, putat... 26 7.4
At4g23440.1 68417.m03379 expressed protein 26 7.4
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 26 7.4
At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) / DNA-... 26 7.4
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 26 7.4
At2g24350.1 68415.m02910 RNA recognition motif (RRM)-containing ... 26 7.4
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 26 7.4
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 26 7.4
At1g08380.1 68414.m00927 expressed protein 26 7.4
At5g35280.1 68418.m04182 hypothetical protein similar to At2g108... 25 9.7
At5g22770.3 68418.m02661 adaptin family protein similar to SP|P1... 25 9.7
At5g22770.2 68418.m02660 adaptin family protein similar to SP|P1... 25 9.7
At5g22770.1 68418.m02659 adaptin family protein similar to SP|P1... 25 9.7
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 25 9.7
At4g10070.1 68417.m01647 KH domain-containing protein DNA-direct... 25 9.7
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 25 9.7
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 25 9.7
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 37.1 bits (82), Expect = 0.003
Identities = 31/101 (30%), Positives = 43/101 (42%)
Frame = +2
Query: 38 TSGISARCGTLRNI*IEVSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSS 217
TS SA+ + VS S P R S SP ++ S PP+ HSS
Sbjct: 141 TSPSSAKSPAITPSSPAVSHSPPPVRHS---SPPVSHSSPPVSHSSPPTSRSSPAVSHSS 197
Query: 218 PLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRCPPVKT 340
P+ + + PVKA +STAS PR +P P + +
Sbjct: 198 PVVAA------SSPVKAVSSSTASSPRAASPSPSPSPSISS 232
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 34.7 bits (76), Expect = 0.016
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +1
Query: 19 NAKPQNHQRDQRQMRHVAQHLN*GIQQPFSP-AR*PANQSQNQPQRSAN*KANQRPPGAD 195
N++PQN + + + + G Q+P S ++ PA+ +P S N +A RPPG+
Sbjct: 286 NSRPQNSRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQRPGSSTNRQAPMRPPGSG 345
Query: 196 RQMLPQFAAGGERPERRHHS--SGEGKIRVDSQPTEEAS 306
M Q A + R S S K+ VD + +S
Sbjct: 346 STMNGQSANRNGQLNSRSDSRRSAPAKVPVDHRKQMSSS 384
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 34.7 bits (76), Expect = 0.016
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +1
Query: 19 NAKPQNHQRDQRQMRHVAQHLN*GIQQPFSP-AR*PANQSQNQPQRSAN*KANQRPPGAD 195
N++PQN + + + + G Q+P S ++ PA+ +P S N +A RPPG+
Sbjct: 389 NSRPQNSRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQRPGSSTNRQAPMRPPGSG 448
Query: 196 RQMLPQFAAGGERPERRHHS--SGEGKIRVDSQPTEEAS 306
M Q A + R S S K+ VD + +S
Sbjct: 449 STMNGQSANRNGQLNSRSDSRRSAPAKVPVDHRKQMSSS 487
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 34.7 bits (76), Expect = 0.016
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +1
Query: 19 NAKPQNHQRDQRQMRHVAQHLN*GIQQPFSP-AR*PANQSQNQPQRSAN*KANQRPPGAD 195
N++PQN + + + + G Q+P S ++ PA+ +P S N +A RPPG+
Sbjct: 57 NSRPQNSRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQRPGSSTNRQAPMRPPGSG 116
Query: 196 RQMLPQFAAGGERPERRHHS--SGEGKIRVDSQPTEEAS 306
M Q A + R S S K+ VD + +S
Sbjct: 117 STMNGQSANRNGQLNSRSDSRRSAPAKVPVDHRKQMSSS 155
>At3g36659.1 68416.m00783 invertase/pectin methylesterase inhibitor
family protein similar to extensin-like protein [Zea
mays] GI:5917666
Length = 264
Score = 33.5 bits (73), Expect = 0.037
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 74 NI*IEVSSSRSPQRDSPLISPKINPSD-PPIEKPISARQELIARCCHSSPLAESVQNAVT 250
+I + +S+ + DSP +P P PI P ++ E+ +SP A + +
Sbjct: 16 SILVTISTHVESRSDSPFSTPAPAPEVMKPIASPANSPAEIYTDSPVASPEAPADSFSPK 75
Query: 251 TLPVKAKYASTASQPRRPVATP 316
PV+ S A+ P PVA+P
Sbjct: 76 NPPVEIDIYSPAASPEAPVASP 97
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 33.1 bits (72), Expect = 0.049
Identities = 23/83 (27%), Positives = 30/83 (36%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKA 268
VS P P+ P P PP + P+ + P V+ V P KA
Sbjct: 112 VSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVYP-PTKA 170
Query: 269 KYASTASQPRRPVATPPRCPPVK 337
P +P +PP PPVK
Sbjct: 171 PVKPPTKPPVKPPVSPPAKPPVK 193
Score = 30.3 bits (65), Expect = 0.34
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Frame = +2
Query: 107 PQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTL---PVKAKYA 277
P +P+ P P PP+ P A + + P++ + V P KA
Sbjct: 146 PPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVK 205
Query: 278 STASQPRRPVATPPRCPP 331
S P +P TPP PP
Sbjct: 206 PPVSPPTKPPVTPPVYPP 223
Score = 29.9 bits (64), Expect = 0.45
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +2
Query: 134 PKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVAT 313
P +P PP++ P+S + + P V+ T PVK + A P +P
Sbjct: 67 PAKSPVKPPVKAPVSPPAKPPVKPPVYPPTKAPVKPP-TKPPVKPPVSPPAKPPVKPPVY 125
Query: 314 PPRCPPVK 337
PP PVK
Sbjct: 126 PPTKAPVK 133
Score = 29.5 bits (63), Expect = 0.60
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +2
Query: 122 PLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRR 301
P +P P+ PP++ P+ + + P+ V PVK P +
Sbjct: 147 PTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKP-PVKPPVYPPTKAPVK 205
Query: 302 PVATPPRCPPV 334
P +PP PPV
Sbjct: 206 PPVSPPTKPPV 216
Score = 29.1 bits (62), Expect = 0.79
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +2
Query: 122 PLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRR 301
P +P P+ PP++ P+S + + P V+ T PVK P +
Sbjct: 95 PTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVK-PPTKPPVKPPVYPPTKAPVK 153
Query: 302 PVATPPRCPPV 334
P PP PPV
Sbjct: 154 PPTKPPVKPPV 164
Score = 29.1 bits (62), Expect = 0.79
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Frame = +2
Query: 107 PQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAV---TTLPVKAKYA 277
P +P+ P P PP+ P A + + P+ + V T PVK +
Sbjct: 126 PPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVS 185
Query: 278 STASQPRRPVATPPRCPPVK 337
A P +P PP PVK
Sbjct: 186 PPAKPPVKPPVYPPTKAPVK 205
>At3g30230.1 68416.m03820 myosin heavy chain-related similar to
Myosin heavy chain, non-muscle (Zipper protein) (Myosin
II)(SP:Q99323) {Drosophila melanogaster}
Length = 527
Score = 31.9 bits (69), Expect = 0.11
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 104 SPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYAST 283
SP R+SP SP+ S P+ I +++ AR +SSP E A T +
Sbjct: 170 SPHRNSPRYSPRNRLSSKPVADLIRKKRDRSAR-GNSSPRREK-SKARTDRSPRLSLPPR 227
Query: 284 ASQPRRPVAT--PPRCPPVKT 340
+ P PV T PPR KT
Sbjct: 228 SMGPPLPVVTSPPPRLSGEKT 248
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 31.1 bits (67), Expect = 0.20
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKA 268
+S S SP+ DSPL SP +P + P S+ +E SPLA S V + P+
Sbjct: 45 LSPSSSPEEDSPL-SPSSSPEEDSPLPPSSSPEE-------DSPLAPSSSPEVDS-PLAP 95
Query: 269 KYASTASQPRRPVATPPRCPPV 334
+ P+ P ++P P+
Sbjct: 96 SSSPEVDSPQPPSSSPEADSPL 117
Score = 28.7 bits (61), Expect = 1.0
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKA 268
VS R P DSPL SP +P + P S+ +E SSP E A ++ P
Sbjct: 33 VSPGREPSTDSPL-SPSSSPEEDSPLSPSSSPEEDSPLPPSSSP-EEDSPLAPSSSPEVD 90
Query: 269 KYASTASQPRRPVATPPRCPP 331
+ +S P PP P
Sbjct: 91 SPLAPSSSPEVDSPQPPSSSP 111
>At3g61850.2 68416.m06946 Dof zinc finger protein DAG1 / Dof
affecting germination 1 (DAG1) / transcription factor
BBFa (BBFA) identical to SP|Q43385 DOF zinc finger
protein DAG1 (Dof affecting germination 1)
(Transcription factor BBFa) (AtBBFa) (rolB domain B
factor a) {Arabidopsis thaliana}
Length = 284
Score = 30.7 bits (66), Expect = 0.26
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 62 GTLRNI*IEVSSSRSPQRDSPLISPKINPSDPPIEKPI 175
G+LRN+ + SS ++ + +PL SP NP P + PI
Sbjct: 100 GSLRNVPVGGSSRKNKRSSTPLASPS-NPKLPDLNPPI 136
>At3g61850.1 68416.m06945 Dof zinc finger protein DAG1 / Dof
affecting germination 1 (DAG1) / transcription factor
BBFa (BBFA) identical to SP|Q43385 DOF zinc finger
protein DAG1 (Dof affecting germination 1)
(Transcription factor BBFa) (AtBBFa) (rolB domain B
factor a) {Arabidopsis thaliana}
Length = 296
Score = 30.7 bits (66), Expect = 0.26
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 62 GTLRNI*IEVSSSRSPQRDSPLISPKINPSDPPIEKPI 175
G+LRN+ + SS ++ + +PL SP NP P + PI
Sbjct: 112 GSLRNVPVGGSSRKNKRSSTPLASPS-NPKLPDLNPPI 148
>At5g67170.2 68418.m08468 SEC-C motif-containing protein / OTU-like
cysteine protease family protein contains Pfam profiles
PF02338: OTU-like cysteine protease, PF02810: SEC-C
motif
Length = 374
Score = 29.5 bits (63), Expect = 0.60
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 119 SPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTT 253
S I+PK + SD P+E AR+ELI S +E+VQ TT
Sbjct: 260 SDTINPK-HASDSPMENTEQAREELIEEESASGNNSETVQAKCTT 303
>At5g67170.1 68418.m08467 SEC-C motif-containing protein / OTU-like
cysteine protease family protein contains Pfam profiles
PF02338: OTU-like cysteine protease, PF02810: SEC-C
motif
Length = 375
Score = 29.5 bits (63), Expect = 0.60
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 119 SPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTT 253
S I+PK + SD P+E AR+ELI S +E+VQ TT
Sbjct: 261 SDTINPK-HASDSPMENTEQAREELIEEESASGNNSETVQAKCTT 304
>At3g44200.1 68416.m04739 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 941
Score = 29.1 bits (62), Expect = 0.79
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 65 TLRNI*IEVSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQ-N 241
T+RNI + + ++ + SP+ S + PS P +K E ++ +A S + N
Sbjct: 370 TIRNIMMVLKEEKARENGSPMRSNRSRPSSVPTQK---NNVETPSKIPKLGDIAHSSKTN 426
Query: 242 AVTTLPVKAKYASTASQPRRPVATPPR 322
A T +P +K AS ++ R P + PP+
Sbjct: 427 ASTPIP-PSKLASDSA--RTPGSFPPK 450
>At3g01700.1 68416.m00103 arabinogalactan-protein (AGP11) identical
to gi|10880499|gb|AAG24279
Length = 136
Score = 28.7 bits (61), Expect = 1.0
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 116 DSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAES---VQNAVTTLPVKAKYASTA 286
D+P +P +P+ P + P +A + A SSP+AE + P + A T
Sbjct: 22 DAPSAAPTASPTKSPTKAPAAAPKSSAAAPKASSPVAEEPTPEDDYSAASPSDSAEAPTV 81
Query: 287 SQPRRPVATP 316
S P P TP
Sbjct: 82 SSP--PAPTP 89
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 104 SPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAES--VQNAVTTLPVKAKYA 277
+P P SP P+ PP++ P P + V+ TT PV+
Sbjct: 128 TPTVKPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTPPVKPPTTTPPVQPPTY 187
Query: 278 STASQPRRPVATPPRCPP 331
+ + P +P PP PP
Sbjct: 188 NPPTTPVKPPTAPPVKPP 205
>At3g61390.2 68416.m06872 U-box domain-containing protein several
hypothetical proteins - Arabidopsis thaliana
Length = 435
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 114 RWGERLLDTSIQMLRNVPHLALIPLVILWFGIDE 13
RW ER +TS + + +PH +L+P + L I E
Sbjct: 385 RWFERGHETSPMINKRLPHTSLVPNLALRSAIQE 418
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 206 CHS-SPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRCPP 331
CH+ +AE+ N V ++ +S+ S+PR P PP P
Sbjct: 93 CHAHKTMAEAFPNQVPFDMIEDSASSSCSEPRTPEKMPPGIQP 135
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/73 (31%), Positives = 29/73 (39%)
Frame = +2
Query: 119 SPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPR 298
+P+ISP P PP P SA ++ S P A + P A AS P
Sbjct: 88 APVISPATPPPQPPQSPPASA--PTVSPPPVSPPPAPTSPPPTPASPPPAP-ASPPPAPA 144
Query: 299 RPVATPPRCPPVK 337
P P PPV+
Sbjct: 145 SPPPAPVSPPPVQ 157
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 2.4
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +2
Query: 92 SSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAK 271
SSS SP SP +SP PP P SA ++ PL+ S + P +
Sbjct: 24 SSSLSPSSSSPSLSP-----SPPSSSPSSAPPSSLSP-SSPPPLSLSPSSPPPPPPSSSP 77
Query: 272 YASTAS--QPRRPVATPPRCPP 331
+S + P P ++P PP
Sbjct: 78 LSSLSPSLSPSPPSSSPSSAPP 99
>At1g02310.1 68414.m00176 glycosyl hydrolase family protein 5 /
cellulase family protein / (1-4)-beta-mannan
endohydrolase, putative similar to (1-4)-beta-mannan
endohydrolase precursor GI:9836826 from [Lycopersicon
esculentum]
Length = 411
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 217 RTVAASGDQLLAGADWLFNWRIAGVDFGT 131
RTV G ++L G D++ N +I +DF T
Sbjct: 245 RTVYNPGGRVLTGTDFITNNQIPDIDFAT 273
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFNWRIAG 146
L +LRQR T A SG+ L G DWL N IAG
Sbjct: 145 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN-NIAG 179
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFNWRIAG 146
L +LRQR T A SG+ L G DWL N IAG
Sbjct: 145 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN-NIAG 179
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFNWRIAG 146
L +LRQR T A SG+ L G DWL N IAG
Sbjct: 145 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN-NIAG 179
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFNWRIAG 146
L +LRQR T A SG+ L G DWL N IAG
Sbjct: 145 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN-NIAG 179
>At5g63380.1 68418.m07955 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL2
[gi:12229665] from Arabidopsis thaliana, 4CL1
[gi:12229631] from Nicotiana tabacum; contains Pfam
AMP-binding enzyme domain PF00501
Length = 562
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 95 SSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQN 241
SS QR S + + S PPI++P+SA + ++ SSP A + +N
Sbjct: 14 SSGFDQRTGIYHSLRPSLSLPPIDQPLSAAEFALSLLLKSSPPATAGKN 62
>At5g12220.1 68418.m01434 las1-like family protein similar to Las1p
[Saccharomyces cerevisiae] GI:495504; contains Pfam
profile PF04031: Las1-like
Length = 611
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 68 LRNI*IEVSSSRSPQRDSPLISPKINPSDPPIEKPISARQEL 193
LR + + R+PQ DSPL+ K S+ I K +S+ EL
Sbjct: 205 LRKLAFSLQLKRNPQFDSPLVKEKC--SNKRIRKIVSSLVEL 244
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +2
Query: 92 SSSRSPQRDSPLISPKINPSDPPIEKPIS 178
SSS +P DSPL SP PS P P S
Sbjct: 235 SSSPTPGPDSPLPSPGPPPSPSPTPGPDS 263
>At3g10985.1 68416.m01326 wound-responsive protein-related similar
to SP|P20144 Wound-induced protein 1 {Solanum tuberosum}
Length = 110
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 245 RRSGRSPPAANCGSIWRSAPGGR 177
RRS P ++C S+W S GR
Sbjct: 76 RRSAEIAPPSHCSSVWESQFSGR 98
>At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL
from Pinus taeda, gi:515503, gi:1143308; contains Pfam
AMP-binding enzyme domain PF00501
Length = 566
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -3
Query: 299 SSVGWLSTRILPSPEEW*RRSGRSPPAANCGSIWRSAPG 183
SSVG L+ + +W SG P N G +W PG
Sbjct: 380 SSVGLLAPNMQAKVVDW--SSGSFLPPGNRGELWIQGPG 416
>At4g07430.1 68417.m01140 hypothetical protein similar to At2g10840,
At5g35280, At2g10500, At2g05860, At4g07310, At1g39270
Length = 242
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 318 GGVATGLLGWLAVDAYF 268
GGV +LGW +D YF
Sbjct: 194 GGVIVAVLGWWKIDRYF 210
>At4g07310.1 68417.m01115 hypothetical protein similar to At2g10840,
At5g35280, At2g10500, At2g05860, At4g07430, At1g39270
Length = 242
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 318 GGVATGLLGWLAVDAYF 268
GGV +LGW +D YF
Sbjct: 194 GGVIVAVLGWWKIDRYF 210
>At3g32150.1 68416.m04094 hypothetical protein
Length = 241
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 218 PLAES-VQNAVTTLPVKAKYASTASQPRRPVATPPRCPP 331
PL+ES + A + PV+ + + T+ + PV PP PP
Sbjct: 148 PLSESGLDWAGPSEPVEPEISVTSVETPEPVVIPPEVPP 186
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 26.2 bits (55), Expect = 5.6
Identities = 23/79 (29%), Positives = 28/79 (35%)
Frame = +1
Query: 10 GFINAKPQNHQRDQRQMRHVAQHLN*GIQQPFSPAR*PANQSQNQPQRSAN*KANQRPPG 189
G N + N + Q R Q N QQP P+ Q P R N NQ+P G
Sbjct: 413 GRFNPQFPNQRPSPPQSRFPDQAPN---QQPSGPSPNRHPDRQGPPPRFQNQAPNQQPTG 469
Query: 190 ADRQMLPQFAAGGERPERR 246
P RP+ R
Sbjct: 470 RFEPQPPNPPRAPPRPQTR 488
>At5g54590.2 68418.m06797 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 440
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 83 IEVSSSRSPQRDSPLISPKINPSDPPIEK 169
I+V R Q++SP SP++ P P +E+
Sbjct: 380 IKVRHCRKRQKNSPSPSPRLPPPPPIVEE 408
>At5g44680.1 68418.m05474 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 353
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNA 244
++S R LISP ++P+ + KP + +EL+ S S +N+
Sbjct: 50 IASKIPSPRPISLISPPLSPNTKSLRKPAGSCKELLRSSSTKSKPVISPENS 101
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFN 161
L +LRQR T A SG+ L G DWL N
Sbjct: 145 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 175
>At4g28810.1 68417.m04119 expressed protein PMID: 12679534, putative
bHLH127 transcription factor
Length = 880
Score = 25.8 bits (54), Expect = 7.4
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +2
Query: 92 SSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAK 271
S S S + ++PL P + P P + + R+E ++ H S VT+ P
Sbjct: 61 SGSGSGEENAPLPLPLLQPPRPLHHQNLFIREEEMSSWLHYS------YTGVTSTPATHP 114
Query: 272 YASTASQPRRPVA 310
+S + P P+A
Sbjct: 115 QSSVSLPPPPPIA 127
>At4g23440.1 68417.m03379 expressed protein
Length = 964
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 89 VSSSRSPQRDSPLISPKINPSDPPIEKPISARQELIARCCHSSPLAES 232
+SSS S S SP +P P I++ +S A+C PL+ S
Sbjct: 21 MSSSSSAAFFSANQSPFFSPRSPKIQQELSESTRSDAQCDSFDPLSSS 68
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFN 161
L +LRQR T A SG+ L G DWL N
Sbjct: 145 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 175
>At3g28030.1 68416.m03499 UV hypersensitive protein (UVH3) /
DNA-repair protein, putative identical to UV
hypersensitive protein [Arabidopsis thaliana]
gi|13649704|gb|AAK37472; similar to Swiss-Prot:P14629
DNA-repair protein complementing XP-G cells homolog
(Xeroderma pigmentosum group G complementing protein
homolog) [Xenopus laevis]
Length = 1479
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 86 EVSSSRSPQRDSPLISPKINPSDPPIEKPISAR 184
E + + +DSP+ + K+ +EKP S+R
Sbjct: 1236 ETEDNNTSDKDSPIANEKVKNKRKRLEKPSSSR 1268
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFN 161
L +LRQR T A SG+ L G DWL N
Sbjct: 145 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 175
>At2g24350.1 68415.m02910 RNA recognition motif (RRM)-containing
protein low similarity to poly(A) binding protein II
from [Xenopus laevis] GI:11527140, [Mus musculus]
GI:2351846, [Bos taurus] GI:1051125; contains
INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA
recognition motif) domain
Length = 537
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 94 QQPFSPAR*PANQSQNQPQRSAN*KANQRPPGADRQMLPQFAAGGERPERRHHSS 258
QQP R PA ++ +RS K +RP +R++ +FA G R+H +
Sbjct: 197 QQPCD--RNPAKYEKSMNERSRTLK--KRPYSPERELDSRFAPSGRAVSARYHDA 247
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 266 AKYASTASQPRRPVATPPRCPP 331
A + ST++ P + + PPR PP
Sbjct: 438 AGHPSTSAYPTKSIGPPPRVPP 459
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = -1
Query: 238 LDALRQRR-----TVAASGDQLLAGADWLFN 161
L +LRQR T A SG+ L G DWL N
Sbjct: 145 LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 175
>At1g08380.1 68414.m00927 expressed protein
Length = 140
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 312 VATGLLGWLAVDAYFAFTGRVVTAFWTLSASGEL 211
V GL+GWLA + A G+ +T + S EL
Sbjct: 64 VGFGLIGWLAPSSIPAINGKSLTGLFFDSIGTEL 97
>At5g35280.1 68418.m04182 hypothetical protein similar to At2g10840,
At2g10500, At2g05860, At4g07310, At4g07430, At1g39270
Length = 205
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -2
Query: 318 GGVATGLLGWLAVDAYFAFTG--RVVTA 241
GGV +LGW ++ YF T RV TA
Sbjct: 157 GGVIVAVLGWWKIERYFDGTKNIRVCTA 184
>At5g22770.3 68418.m02661 adaptin family protein similar to SP|P18484
adaptor-related protein complex 2 alpha 2 subunit
(Alpha-adaptin C) (Clathrin assembly protein complex 2
alpha-C large chain) {Rattus norvegicus}; contains Pfam
profiles PF01602 Adaptin N terminal region, PF02883
Adaptin C-terminal domain
Length = 1012
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 221 LAESVQNAVTTLPVKAKYASTASQPRRPVATPP 319
L E ++ + T+P+ ++ A+ P PVA PP
Sbjct: 963 LKEFIKEQLITVPMGSRALVPAAGPAPPVAQPP 995
>At5g22770.2 68418.m02660 adaptin family protein similar to SP|P18484
adaptor-related protein complex 2 alpha 2 subunit
(Alpha-adaptin C) (Clathrin assembly protein complex 2
alpha-C large chain) {Rattus norvegicus}; contains Pfam
profiles PF01602 Adaptin N terminal region, PF02883
Adaptin C-terminal domain
Length = 1012
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 221 LAESVQNAVTTLPVKAKYASTASQPRRPVATPP 319
L E ++ + T+P+ ++ A+ P PVA PP
Sbjct: 963 LKEFIKEQLITVPMGSRALVPAAGPAPPVAQPP 995
>At5g22770.1 68418.m02659 adaptin family protein similar to SP|P18484
adaptor-related protein complex 2 alpha 2 subunit
(Alpha-adaptin C) (Clathrin assembly protein complex 2
alpha-C large chain) {Rattus norvegicus}; contains Pfam
profiles PF01602 Adaptin N terminal region, PF02883
Adaptin C-terminal domain
Length = 1012
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 221 LAESVQNAVTTLPVKAKYASTASQPRRPVATPP 319
L E ++ + T+P+ ++ A+ P PVA PP
Sbjct: 963 LKEFIKEQLITVPMGSRALVPAAGPAPPVAQPP 995
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 143 NPSDPPIEKPISARQELIARCCHSSPLAESVQ 238
N D + P +R++LIAR CH LA + +
Sbjct: 147 NNDDNNWQAPNRSREDLIARECHWGELAHTTR 178
>At4g10070.1 68417.m01647 KH domain-containing protein DNA-directed
RNA polymerase (EC 2.7.7.6) II largestchain - mouse,
PIR2:A28490
Length = 725
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 166 KANQRPPGADRQMLPQFAAGGERPERRHHSSGEGKIRVD 282
K Q GA Q++PQ A G ER SG+ K+++D
Sbjct: 295 KNMQTRSGARTQLIPQHAEGDGLKERTVRISGD-KMQID 332
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/62 (27%), Positives = 22/62 (35%)
Frame = +2
Query: 146 PSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRC 325
P+ PP P P+ S VTT P A + P PV++PP
Sbjct: 23 PTSPPTATPAPPTPTTPPPAATPPPV--SAPPPVTTSPPPVTTAPPPANPPPPVSSPPPA 80
Query: 326 PP 331
P
Sbjct: 81 SP 82
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/62 (27%), Positives = 22/62 (35%)
Frame = +2
Query: 146 PSDPPIEKPISARQELIARCCHSSPLAESVQNAVTTLPVKAKYASTASQPRRPVATPPRC 325
P+ PP P P+ S VTT P A + P PV++PP
Sbjct: 23 PTSPPTATPAPPTPTTPPPAATPPPV--SAPPPVTTSPPPVTTAPPPANPPPPVSSPPPA 80
Query: 326 PP 331
P
Sbjct: 81 SP 82
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,909,520
Number of Sequences: 28952
Number of extensions: 184308
Number of successful extensions: 745
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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