Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0549.Seq
(741 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 25 0.49
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 0.85
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 0.85
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 24 1.1
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 24 1.5
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 24 1.5
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 2.0
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 2.0
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 21 7.9
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 21 7.9
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 21 7.9
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 7.9
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 25.4 bits (53), Expect = 0.49
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 609 DLPLYTKKSIESAT-S*RHTTLWTATYSNPTRSSRW 713
D P Y K + +T S T+ +ATY+N SS W
Sbjct: 184 DSPNYIKPQLHVSTGSTSSPTIASATYTNSANSSIW 219
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 30 ASDRVWAPKSWRWFTISQTGIW 95
A+ +W+P S FT+ Q W
Sbjct: 214 ANSSIWSPASIDSFTLEQHRSW 235
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.6 bits (51), Expect = 0.85
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 40 GCGHPSRGGGLPSAKQEYG 96
GCG P +GG P+ K +YG
Sbjct: 391 GCG-PGQGGLQPTIKSDYG 408
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.6 bits (51), Expect = 0.85
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 40 GCGHPSRGGGLPSAKQEYG 96
GCG P +GG P+ K +YG
Sbjct: 391 GCG-PGQGGLQPTIKSDYG 408
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 709 RELRVGLEYVAVQRVVCRQLVALSI 635
R++ +G+E++A RVV R L A ++
Sbjct: 599 RQVALGMEHLAKTRVVHRDLAARNV 623
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 268 PPEDDPKQLFVAMTSDRGLCG 330
PP+DD L +D G CG
Sbjct: 353 PPQDDAGNLISPSINDDGTCG 373
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 268 PPEDDPKQLFVAMTSDRGLCG 330
PP+DD L +D G CG
Sbjct: 354 PPQDDAGNLISPSINDDGTCG 374
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 265 TPPEDDPKQLFVAMTSDRGLCG 330
TPPEDD + L +++S L G
Sbjct: 668 TPPEDDAESLNQSISSPGALSG 689
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 265 TPPEDDPKQLFVAMTSDRGLCG 330
TPPEDD + L +++S L G
Sbjct: 560 TPPEDDAESLNQSISSPGALSG 581
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/28 (21%), Positives = 16/28 (57%)
Frame = -1
Query: 165 FMDCVIFWIFFTDXRRMEMAFKVAIFLF 82
++ C+ +W+ + ++ + A+FLF
Sbjct: 292 YVMCIWYWLDRESAKNVDQRIQKALFLF 319
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/28 (21%), Positives = 16/28 (57%)
Frame = -1
Query: 165 FMDCVIFWIFFTDXRRMEMAFKVAIFLF 82
++ C+ +W+ + ++ + A+FLF
Sbjct: 292 YVMCIWYWLDRESAKNVDQRIQKALFLF 319
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 315 QRFVRSCTHWCI*SDPQPSQRT 380
+RFV+ T++ DP P ++T
Sbjct: 461 KRFVKLWTNFAKNGDPNPKEKT 482
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 621 YTKKSIESATS*RHTTLWTATYSNPTRSSRWPRC 722
+T+ I+ T RHTT T P + RC
Sbjct: 269 FTRHLIQRRTHTRHTTTSHNTRGTPRTTPASSRC 302
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,707
Number of Sequences: 336
Number of extensions: 4317
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -