Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0548.Seq
         (783 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ...   165   1e-39
UniRef50_P62593 Cluster: Beta-lactamase TEM precursor; n=261; ro...   104   2e-21
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    93   5e-18
UniRef50_Q9R4I2 Cluster: Beta-lactamase; n=5; Gammaproteobacteri...    62   2e-08
UniRef50_Q1UYY9 Cluster: Putative uncharacterized protein; n=1; ...    58   2e-07
UniRef50_Q9S169 Cluster: Beta-lactamase SHV-24 precursor; n=220;...    41   0.040
UniRef50_Q7NL89 Cluster: Gll1237 protein; n=1; Gloeobacter viola...    35   2.6  
UniRef50_Q92854 Cluster: Semaphorin-4D precursor; n=26; Euteleos...    33   6.1  
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    33   8.1  

>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 99

 Score =  165 bits (400), Expect = 1e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = +2

Query: 509 SGKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCGILPSC 688
           SGKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCGILPSC
Sbjct: 27  SGKCARNPYLFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLFCGILPSC 86

Query: 689 FCSPRNAGESKRC 727
           FCSPRNAGESKRC
Sbjct: 87  FCSPRNAGESKRC 99


>UniRef50_P62593 Cluster: Beta-lactamase TEM precursor; n=261;
           root|Rep: Beta-lactamase TEM precursor - Escherichia
           coli
          Length = 286

 Score =  104 bits (250), Expect = 2e-21
 Identities = 49/52 (94%), Positives = 50/52 (96%)
 Frame = +3

Query: 627 MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGLHQLDLNSG 782
           MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVG  +LDLNSG
Sbjct: 1   MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSG 52


>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 93.5 bits (222), Expect = 5e-18
 Identities = 49/72 (68%), Positives = 49/72 (68%)
 Frame = -2

Query: 497 DAPCSGALSAAGVVVTRSVXXXXXXXXXXXXXXXXXXXXXXXAGFPRQALNRGLPLGFRF 318
           DAPCSGALSAAGVVVTRSV                       AGFPRQALNRGLPLGFRF
Sbjct: 2   DAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFAGFPRQALNRGLPLGFRF 61

Query: 317 SALRHLDPKKLD 282
           SALRHLDPKKLD
Sbjct: 62  SALRHLDPKKLD 73


>UniRef50_Q9R4I2 Cluster: Beta-lactamase; n=5;
           Gammaproteobacteria|Rep: Beta-lactamase - Shigella
           flexneri
          Length = 52

 Score = 62.1 bits (144), Expect = 2e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +3

Query: 687 VFAHPETLVKVKDAEDQLGARVGLHQLDLNSG 782
           VFAHPETLVKVKDAEDQLGARVG  +LDLNSG
Sbjct: 1   VFAHPETLVKVKDAEDQLGARVGYIELDLNSG 32


>UniRef50_Q1UYY9 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Pelagibacter ubique HTCC1002|Rep: Putative
           uncharacterized protein - Candidatus Pelagibacter ubique
           HTCC1002
          Length = 26

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -1

Query: 735 DLQHLLLSPAFLGEQKQEGKMPQKRE 658
           DLQHLLLSPAFLGEQKQEGKMPQKRE
Sbjct: 1   DLQHLLLSPAFLGEQKQEGKMPQKRE 26


>UniRef50_Q9S169 Cluster: Beta-lactamase SHV-24 precursor; n=220;
           root|Rep: Beta-lactamase SHV-24 precursor - Escherichia
           coli
          Length = 286

 Score = 40.7 bits (91), Expect = 0.040
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = +3

Query: 633 IQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGLHQLDLNSG 782
           +++ R+ +I   A   L V A P+ L ++K +E QL  RVG+ ++DL SG
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASG 50


>UniRef50_Q7NL89 Cluster: Gll1237 protein; n=1; Gloeobacter
           violaceus|Rep: Gll1237 protein - Gloeobacter violaceus
          Length = 353

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = +2

Query: 590 LINASIILKKEEY-----EYSTFPCRPYSLFCGILPSCFCSPRNAGESKRC 727
           +I + + + KE Y     +Y    C  + LFC +LP CF S   AGES  C
Sbjct: 2   IIISRVQVSKENYWWCMEKYMKKACLGFGLFCTVLPLCFTSAVLAGESAVC 52


>UniRef50_Q92854 Cluster: Semaphorin-4D precursor; n=26;
           Euteleostomi|Rep: Semaphorin-4D precursor - Homo sapiens
           (Human)
          Length = 862

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -2

Query: 713 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 633
           H+ +W VS+++KAKC +KG    TE LN
Sbjct: 83  HEVYWKVSEDKKAKCAEKGKSKQTECLN 110


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 12/16 (75%), Positives = 16/16 (100%)
 Frame = +2

Query: 2   RPSQQLRTLNGEWQIV 49
           RPSQQLR+LNGEW+++
Sbjct: 57  RPSQQLRSLNGEWRLM 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,596,266
Number of Sequences: 1657284
Number of extensions: 15536544
Number of successful extensions: 36385
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36374
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)