Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0547.Seq
         (759 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    60   4e-08
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.067
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.27 
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    36   0.82 
UniRef50_Q7VDE4 Cluster: Uncharacterized conserved membrane prot...    34   4.4  
UniRef50_Q6K766 Cluster: Putative uncharacterized protein OSJNBa...    34   4.4  
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   5.8  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 60.5 bits (140), Expect = 4e-08
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = +1

Query: 511 TRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 633
           TRLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 63  TRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.067
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +3

Query: 576 PRKSPVSLFFVTTSPCREW 632
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 36.3 bits (80), Expect = 0.82
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 72  GKCFR*CSSCDDPRISPLTSQYEYTQ 149
           GKCFR C S ++ RISPLTS+Y+  Q
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_Q7VDE4 Cluster: Uncharacterized conserved membrane
           protein; n=23; Cyanobacteria|Rep: Uncharacterized
           conserved membrane protein - Prochlorococcus marinus
          Length = 228

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = +2

Query: 533 SSLKYLKCTHSDYEAS*ESRIVIFRHYLPVPGVGNLRACCLPWMLVAVSQAPSSGIE 703
           S  K ++   + Y A+  + I I  +YLP+ G     A  LP  L+ V + PSSGIE
Sbjct: 20  SRRKSVRIVETSYLAAASALIWIALYYLPIGGAFFRIALPLPLALLQVRRGPSSGIE 76


>UniRef50_Q6K766 Cluster: Putative uncharacterized protein
           OSJNBa0048K16.11; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0048K16.11 - Oryza sativa subsp. japonica (Rice)
          Length = 142

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 715 GESGFDSGRGSLRNGYQHPRKAAG 644
           G+ GFD G G  R G QHP +A G
Sbjct: 105 GQIGFDDGEGDTRRGQQHPTEARG 128


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,666,157
Number of Sequences: 1657284
Number of extensions: 14676191
Number of successful extensions: 34412
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34397
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)