Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0547.Seq
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056877-1|AAL23662.1|  218|Drosophila melanogaster attacin B pr...    30   3.0  
BT022158-1|AAY51553.1|  409|Drosophila melanogaster IP01393p pro...    30   3.9  
AJ276705-1|CAC06429.1|  409|Drosophila melanogaster homeobrain p...    30   3.9  
AE013599-3089|AAF46642.3|  409|Drosophila melanogaster CG33152-P...    30   3.9  
AE014297-3736|AAF56416.3|  993|Drosophila melanogaster CG13654-P...    29   9.1  

>AY056877-1|AAL23662.1|  218|Drosophila melanogaster attacin B
           protein.
          Length = 218

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 697 SGRGSLRNGYQHPRKAAGAQITH-SRHGEVVTKNNDTGL 584
           + +  L NG++ PR  AG   +H + HG  +T +N  G+
Sbjct: 126 ASQNKLANGFEFPRNGAGLDYSHINGHGASLTHSNFPGI 164


>BT022158-1|AAY51553.1|  409|Drosophila melanogaster IP01393p
           protein.
          Length = 409

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = -3

Query: 721 GNGESGFDSGRGSLRNGYQHPRKAAGAQITHSRHGEVVTKNND 593
           GNG  G  +G G +    Q P  AAGA    S    VVTK  D
Sbjct: 368 GNGGGGLLTG-GLISTAAQSPNSAAGASSNASTPVSVVTKGED 409


>AJ276705-1|CAC06429.1|  409|Drosophila melanogaster homeobrain
           protein protein.
          Length = 409

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = -3

Query: 721 GNGESGFDSGRGSLRNGYQHPRKAAGAQITHSRHGEVVTKNND 593
           GNG  G  +G G +    Q P  AAGA    S    VVTK  D
Sbjct: 368 GNGGGGLLTG-GLISTAAQSPNSAAGASSNASTPVSVVTKGED 409


>AE013599-3089|AAF46642.3|  409|Drosophila melanogaster CG33152-PA
           protein.
          Length = 409

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = -3

Query: 721 GNGESGFDSGRGSLRNGYQHPRKAAGAQITHSRHGEVVTKNND 593
           GNG  G  +G G +    Q P  AAGA    S    VVTK  D
Sbjct: 368 GNGGGGLLTG-GLISTAAQSPNSAAGASSNASTPVSVVTKGED 409


>AE014297-3736|AAF56416.3|  993|Drosophila melanogaster CG13654-PA
           protein.
          Length = 993

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -2

Query: 644 RAN-YPLPARGGSDEK*RYGTLTRPRNRNEYTLNI-LTRNNWRASLV 510
           RAN YPL   GG+D    +GT+ RP    E ++   +  N+W  +L+
Sbjct: 352 RANGYPL---GGTDHNHGHGTIIRPNQTTEISIQFGVQPNSWHYALL 395


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,018,227
Number of Sequences: 53049
Number of extensions: 685339
Number of successful extensions: 1542
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)