Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0544.Seq
(672 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 4e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 184 4e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 5e-29
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 109 2e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 94 8e-20
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 84 1e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 67 1e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 59 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 7e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 33 0.16
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.64
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 0.84
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 1.1
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 1.1
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 1.5
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 1.5
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.5
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.0
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 2.0
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 30 2.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.0
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 2.6
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 2.6
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 3.4
SB_25802| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 3.4
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 3.4
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 29 3.4
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 4.5
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 28 6.0
SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 7.9
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 28 7.9
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 7.9
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 7.9
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 7.9
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 7.9
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 7.9
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 7.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 126 bits (304), Expect = 2e-29
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 112 bits (270), Expect = 2e-25
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTERGYS 670
GRTTGIV+DSGDGV+HTVPIYEGYA+PHAI+RLDLAGRDLTDYLMKILTERGYS
Sbjct: 147 GRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS 200
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYAS 145
Score = 123 bits (297), Expect = 1e-28
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 113 bits (272), Expect = 1e-25
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTERGYS 670
GRTTGIV+DSGDGV+HTVPIYEGYA+PHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYAS 145
Score = 124 bits (300), Expect = 5e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 113 bits (272), Expect = 1e-25
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTERGYS 670
GRTTGIV+DSGDGV+HTVPIYEGYA+PHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 130 bits (315), Expect = 8e-31
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 113 bits (272), Expect = 1e-25
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTERGYS 670
GRTTGIV+DSGDGV+HTVPIYEGYA+PHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 147 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 QIMFETFNTPAMYVAIQAVLSLYAS 509
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 126 bits (304), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 252
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/27 (85%), Positives = 25/27 (92%), Gaps = 2/27 (7%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYE--GYA 583
GRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 147 GRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 124 bits (300), Expect = 5e-29
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQRK 258
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 112 bits (270), Expect = 2e-25
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTERGYS 670
GRTTGIV+DSGDGV+HTVPIYEGYA+PHAI+RLDLAGRDLTDYLMKILTERGYS
Sbjct: 109 GRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS 162
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 344
KRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +3
Query: 417 NREKMTQIMFETFNTPAMYVAIQAVLSLYAS 509
N + M +IMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYAS 108
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 109 bits (263), Expect = 2e-24
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTERGYS 670
GRTTG+V DSGDGVSH VPIYEGYA+PHAILRLDLAGRDLTDYLMK++TERGYS
Sbjct: 25 GRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYS 78
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = +3
Query: 438 IMFETFNTPAMYVAIQAVLSLYAS 509
IMFE FN+PA+YVAIQAVLSLYAS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYAS 24
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 TEKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 425
++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 426 KMTQIMFETFNTPAMYVAIQAVLSLYA 506
KM ++MFE + +Y+AIQAVL+LYA
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYA 148
Score = 80.6 bits (190), Expect = 1e-15
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTERGYS 670
G TG+V+DSGDGV+H P+YEG+A+PH RLD+AGRD+T YL+K++ RGY+
Sbjct: 150 GLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYA 203
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQR 255
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA +
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQ 63
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = +3
Query: 324 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 503
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 504 AS 509
AS
Sbjct: 2189 AS 2190
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTERGYS 670
GRTTG V D GDGVSHTVP+Y+GY +PHA R+DLAGRDLT YL +++TERGYS
Sbjct: 2191 GRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYS 2244
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 198
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 83.8 bits (198), Expect = 1e-16
Identities = 34/53 (64%), Positives = 47/53 (88%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTERGY 667
GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+
Sbjct: 172 GRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGH 224
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +3
Query: 372 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYAT 171
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/76 (35%), Positives = 49/76 (64%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 461
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 462 PAMYVAIQAVLSLYAS 509
PA ++ +VL+ +A+
Sbjct: 63 PAFFLCKNSVLTAFAN 78
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 509 GRTTGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTE 658
GR+ G+V+DSG + VP+++GY + AI+R LAG +T ++ E
Sbjct: 79 GRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 198
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +2
Query: 518 TGIVLDSGDGVSHTVPIYEGYAIPHAILRLDLAGRDLTDYLMKILTER 661
TG V+DSGDGV+H +P+ EGY I I + +AGRD+T ++ ++L ER
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 67 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 213
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 276 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 389
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 518 TGIVLDSGDGVSHTVPI 568
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 195 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 79
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 33.5 bits (73), Expect = 0.16
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 8/114 (7%)
Frame = +3
Query: 351 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E APE V T AP + P+ +T + ET PA A++ +L ++VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 519 PVSCWTPATVSP--TPCPSTKDTQSPT--PSCVWT*PVATSQTTS*RSSPNAAT 668
+ + TV+P T P+T T P W ++ T+ AAT
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTWAPETTSAPETTVAPEITAAT 1436
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 357 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWT 536
++A + +P + E N K + +K+ Q M +T + + ++ +A +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 537 PATVSPTPCPSTKDTQSP-TPSCV 605
P PT P+ K T++P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 447 ETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTQSPTPSCVWT*PVAT 626
ET + PA+ I + + + PP++ T + S TP +T + + + + T P T
Sbjct: 661 ETTHHPAVQT-IPIIKTSATTQTPPIASTTDTSTSQTPPIATTPSLTTQTTLIATTPSLT 719
Query: 627 SQTTS*RSSPNAATR 671
+QTT ++P+ T+
Sbjct: 720 TQTTLIATTPSLTTQ 734
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
T E VAPE + E ++P+ T + ET TP VA + ++ +V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 519 PVSCWTPATVSPTPCPSTKDTQSP 590
+ TV+P + + T++P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = +3
Query: 351 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E +APE E P ++ E + P+ + T + +T TP A + ++ A+V
Sbjct: 4264 ETTMAPESTEAPETTIVPETTVAPETTKAPETTVASKTTKTPETTFAPETTMAPEATVAE 4323
Query: 519 PVSCWTPATVSPTPCPSTKDTQSPTPSCVWT*PVATSQTTS 641
+ TV+P + + T++P + V VA T +
Sbjct: 4324 ETTMAPVTTVAPETTKAPESTEAPETTMVPETTVAPETTVT 4364
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 351 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E +APE E P + E+ P+ MT + ET TP VA + + +++ P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 519 PVSCWTPATVSPTPCPSTKDTQSP 590
+ TV+P + + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +3
Query: 339 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
T E VAPE + E+ L + +T + ET TP VA + + ++ P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 519 PVSCWTPATVSPTPCPSTKDTQSP 590
+ TV+P + + T +P
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAP 4996
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +3
Query: 384 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPC 563
L E + P++ T I E+ P V +S ++ VPP + +TV+P
Sbjct: 2355 LAQETTMAPESTVVPPTTIAPESTEIPNSTVVPGTTISPKSTEVPPTTMTAESTVAPGTT 2414
Query: 564 PSTKDTQSPTPSCVWT*PVATSQT 635
+ + T +P + VAT T
Sbjct: 2415 MAPESTVTPETTMAPESTVATGTT 2438
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 273 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 425
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 507 SVVPPVSCWTPATVSPTPCPSTKDTQSPTPSCVWT*PVATSQTTS 641
SV +S +P T + P + +T+ P+PS T P AT+ T S
Sbjct: 3 SVTSTLSAGSPVTAPSSTRPPSPNTRPPSPSTTATLPSATNSTQS 47
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 31.1 bits (67), Expect = 0.84
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 351 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 518
E VAPE L E P+ + +T P VAI++ L+L ++V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 519 PVSCWTPATVSPTPCPSTKDTQSP 590
+ T TV+P + + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 534 TPATVSPTPCPSTKDTQSPTPSCVWT*PVATSQT-TS*RSSPNAAT 668
T T +PT +T +T + TP+ T P AT+ T + ++PN T
Sbjct: 175 TATTTTPTATTTTPNTTTNTPNATTTTPTATTTTPNATTTTPNTTT 220
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 507 SVVPPVSCWTP--ATVSPTPCPSTKDTQSPTPSCVWT*PVATSQT-TS*RSSPNAAT 668
+ P + TP T +PT +T + TP+ P AT+ T T+ ++PNA T
Sbjct: 157 TTTPNTTTTTPNTTTTTPTATTTTPTATTTTPNTTTNTPNATTTTPTATTTTPNATT 213
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 442 CSKHSTRPPCTSPSKPCSRCTRRSYHRYRAG 534
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Frame = +3
Query: 534 TPATVSPT--------PCPSTKDTQSPTPSCVWT*PVATSQTTS*RSSPNA 662
TPAT +PT P T +TQSPT + + T AT+ T S +SP +
Sbjct: 148 TPATQNPTDSSLSTKPPTKKTGETQSPTENSISTEESATTPTPSGSTSPTS 198
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 398 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 490
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 445 SKHSTRPPCTSPSKPCSRCTRRSYHRYRAGLRRRCLPHRAHLRRIRNPPR-HPASGLSRS 621
S ++TR S R TRRS + R RR R+H RR N R H + +
Sbjct: 735 SSNTTRSHTRRSSNTTRRHTRRSSNTTRRHTRRSSNTTRSHTRRSSNTTRGHTRRSSNTT 794
Query: 622 RPH 630
R H
Sbjct: 795 RSH 797
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +1
Query: 445 SKHSTRPPCTSPSKPCSRCTRRSYHRYRAGLRRRCLPHRAHLRRIRNPP-RHPASGLSRS 621
S ++TR S TRRS + R+ RR R H RR N RH + +
Sbjct: 713 SSNTTRSHTRRSSNTTRSLTRRSSNTTRSHTRRSSNTTRRHTRRSSNTTRRHTRRSSNTT 772
Query: 622 RPH 630
R H
Sbjct: 773 RSH 775
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 445 SKHSTRPPCTSPSKPCSRCTRRSYHRYRAGLRRRCLPHRAHLRRIRNPPR-HPASGLSRS 621
S ++TR S TRRS + R+ RR R+H RR N R H + +
Sbjct: 1061 SSNTTRTHTRRSSNTTRGHTRRSSNTTRSHARRSSNTTRSHTRRSSNTTRSHTGRSSNTT 1120
Query: 622 RPH 630
R H
Sbjct: 1121 RSH 1123
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 165 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTEKRGILTLKYPIEHGIVTNW--DDMEKIWHH 338
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 339 TFYN 350
T N
Sbjct: 497 TCPN 500
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 519 PVSCWTPATVSPTPCPSTKD--TQSPTPSCVWT*PVATSQTTS*RSSPNAAT 668
P + PAT +PT +T T +PT T P T+ TT ++P A T
Sbjct: 50 PTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATT 101
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 519 PVSCWTPATVSPT-PCPSTKD-TQSPTPSCVWT*PVATSQTTS*RSSPNAAT 668
P + PAT +PT P +T T +PT T P T+ T S ++P A T
Sbjct: 134 PTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATT 185
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 519 PVSCWTPATVSPT-PCPST-KDTQSPTPSCVWT*PVATSQTTS*RSSPNAAT 668
P + PAT +PT P +T T +PT T P T+ T ++P A T
Sbjct: 106 PTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATT 157
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNE 353
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 85 EVAALVVDNGSGMCKAGFAGDDAPRAV 165
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = -1
Query: 261 LFSLCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 97
+F+ CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 96 RGNFFVAHLELVK 58
G V L+ K
Sbjct: 520 HGQVDVLLLDFQK 532
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 390 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTP 560
T+AP L PK T + ET + PA+ +A + + +V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 561 CPSTKDTQSP 590
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +3
Query: 378 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPT 557
PVL A P A + TQ + P ++ V + A PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 558 PCPSTKDTQSPTP 596
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_25802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 435 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTKDTQSPTPSCVWT* 614
+++++ + A + V S + PP T T PS T TPS V T
Sbjct: 8 ELIYDIDPSSAQAAEMATVSSPTTTATPPYDTTTTPLYDTTATPSYVTTA--TPSYVTTA 65
Query: 615 PVATSQTTS*RSS-PNAAT 668
PV +S+TT+ S+ P++ T
Sbjct: 66 PVYSSETTTAASAYPSSYT 84
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 507 SVVPPVSCWTPATVSPTPCPSTKDTQSPTPSCV 605
+VVPP+ P V P+P + + +SPTPSC+
Sbjct: 209 AVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 356 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVGRTTGIVLD 535
ACR R P P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 536 SGDGVSHTVPI 568
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 519 PVSCWTPATVSPTPCPSTKDTQSPTPSCVWT*PVATSQTTS 641
P + +TP T S TP PS T S TP+ +T + + TTS
Sbjct: 64 PTTSYTPTT-SYTPTPSYTPTTSYTPTPSYTSTTSYTPTTS 103
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 519 PVSCWTPATVSPTPCPSTKDTQSPTPSCVWT*PVATSQTTS*RSSPN 659
P + +T T S TP PS T S TP+ +T + + TTS +P+
Sbjct: 34 PTTSYT-CTTSYTPTPSYTPTPSYTPTTSYTPTTSYTPTTSYTPTPS 79
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 519 PVSCWTPATVSPTPCPSTKDTQSPTPSCVWT*PVATSQTTS*RSSPN 659
P +TP T S TP PS T S TP+ +T + + T S +P+
Sbjct: 76 PTPSYTPTT-SYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPS 121
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 519 PVSCWTPATVSPTPCPSTKDTQSPTPSCVWT*PVATSQTTS 641
P +TP T S TP PS T S TP+ +T + + TTS
Sbjct: 112 PTPSYTP-TPSYTPTPSYTSTTSYTPTTSYTPTPSYTSTTS 151
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 519 PVSCWTPATVSPTPCPSTKDTQSPTPSCVWT*PVATSQTTS*RSSPN 659
P + +T +T S TP PS T S TP+ +T + + TTS +P+
Sbjct: 100 PTTSYT-STTSYTPTPSYTPTPSYTPTPSYTSTTSYTPTTSYTPTPS 145
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Frame = +3
Query: 336 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVAIQAVLSLY 503
HT N AP HP L P+A M + ET P M V
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 504 ASVVPPVSCWTPATVSPTPCPSTKDTQSPTPS 599
PP S P PTP + +P PS
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 516 PPVSCWTPATVSPTPCPSTKDTQSPTPSCVWT*PVATSQTT 638
PPV+ TP T T P+TK T + P+ P AT TT
Sbjct: 6111 PPVT--TPTTAPTTTPPTTKQTTTQLPATTKA-PTATKPTT 6148
>SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 457 TRPPCTSPSKPCSRCTRRSYH-RYRAGLRRRCLPHRAHLRRIRNPPR 594
T+ P TSP K S R YH R R RRR + H RR N R
Sbjct: 200 TKNPITSPDKVSSLPLRCYYHCRRRCYRRRRRHFYHHHPRRYHNHRR 246
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/87 (26%), Positives = 30/87 (34%)
Frame = +3
Query: 378 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPT 557
P T P P T +T TP + P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 558 PCPSTKDTQSPTPSCVWT*PVATSQTT 638
TK T + TP+ P A + TT
Sbjct: 88 TSTLTKPTPATTPTPTKPTPTAHTPTT 114
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.3 bits (60), Expect = 6.0
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Frame = +3
Query: 390 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASV-----VPPVSCWTPAT--- 545
T+A + + E T + T TP++ + QA S+ S V P + TP+
Sbjct: 1850 TQAASSVILSAEVTTSVTSSTQVTPSVASSTQAATSVTPSTQGMPSVAPSTQMTPSVASS 1909
Query: 546 --VSPTPCPSTKDTQSPTPSCVWT*PVATSQTTS*RSSPNAAT 668
V+P+ ST+ S TPS + T S T S +++P+AA+
Sbjct: 1910 TQVTPSVASSTQAAPSVTPSTLMT----PSVTPSTQAAPSAAS 1948
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = -3
Query: 322 SMSSQLVTIPCSMGYLRVRIPLFSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHL 143
+++SQ VT M R +PL S P + KSP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 142 LRNRPCTYRS 113
+ P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 170 GNTARGASSPAKPALHIPEPLSTT 99
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Frame = +3
Query: 330 WHHTFYNELRVAPEEH----PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 497
+ H Y + P H P T P P+ + + ++ + P+ ++ +
Sbjct: 170 YKHPSYPTYNIPPTPHTSIPPTPHTSIPPTPRPTYKHPSYPSYKHPSYPSSHIQASLLPH 229
Query: 498 LYASVVPPVSCW------TPAT-VSPTPCPSTKDTQSPTP 596
+ AS++P + TP T + PTP P T +PTP
Sbjct: 230 IQASLLPLIPNTSIPPTPTPHTSIPPTPTPHTSIPPTPTP 269
>SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1189
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Frame = +3
Query: 441 MFETFNTPAM-YVAIQAVLSLYASVVP------PVSCWTPATV-----SPTPCPSTKDTQ 584
M++ F T ++ + A LS+Y + VP P + TP T+ +PTP P+T + Q
Sbjct: 449 MYQCFATNSLGSIQASAELSVYKTGVPLPTTRLPTTAQTPTTILPPTTTPTPPPTTTEPQ 508
Query: 585 SP 590
P
Sbjct: 509 RP 510
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -3
Query: 256 FSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 77
+ P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 128 YRAPLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 549 SPTPCPSTKDTQSPTPSCVWT*PVATSQTTS 641
+PTP P K T +PTPS T P T S
Sbjct: 223 APTPPPPVKTTAAPTPSPPQTPPPPTGSCGS 253
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/65 (24%), Positives = 25/65 (38%)
Frame = +3
Query: 396 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTK 575
A P A + + +NTP ++ + +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQA--PPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 576 DTQSP 590
Q P
Sbjct: 946 QPQPP 950
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/59 (37%), Positives = 25/59 (42%)
Frame = +1
Query: 487 PCSRCTRRSYHRYRAGLRRRCLPHRAHLRRIRNPPRHPASGLSRSRPHRLPHEDPHRTR 663
P RS R R+ RRR RR R+P H S SRSR R P R+R
Sbjct: 216 PAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRHSRSR 273
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L LC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +3
Query: 360 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTP 539
VAPE ++ E + P+ T + ET + VA + + A++VP +
Sbjct: 963 VAPES--TVMPETTVAPETTMAPETTVAAETTASAETTVAPETTAAPDATLVPDTTLAPE 1020
Query: 540 ATVSPTPCPSTKDTQSP 590
TV+P + + T +P
Sbjct: 1021 TTVAPESTKAPETTMAP 1037
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 261 LFSLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 118
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,754,228
Number of Sequences: 59808
Number of extensions: 642107
Number of successful extensions: 2827
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 2260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2768
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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