Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0543.Seq
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 36 0.028
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 36 0.028
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 35 0.065
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 34 0.086
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 34 0.086
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 34 0.086
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.086
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 34 0.086
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 34 0.086
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 34 0.086
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 34 0.086
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.086
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 34 0.086
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 33 0.20
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC024882-17|AAF60937.1| 321|Caenorhabditis elegans Serpentine r... 29 3.2
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 29 4.3
L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated p... 29 4.3
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 28 7.4
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 28 7.4
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 28 7.4
U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL021487-12|CAA16358.2| 324|Caenorhabditis elegans Hypothetical... 27 9.8
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 32 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 121
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 32 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 121
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 34.7 bits (76), Expect = 0.065
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 20 EAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E P+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 119 EMPQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 154
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 62 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 62 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.086
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 17 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 26 PKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 127
P+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 2 PQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 35
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical
protein C54G4.4 protein.
Length = 868
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = -3
Query: 165 TCLLTTCGRP*WPLVGRGEV---CCLIEFA--MFCSE-YRLIGELNCLCNTLGASSPTT 7
TC L CGRP PL+ G V E A C + +RLIG + +C G P T
Sbjct: 600 TCELVDCGRP--PLIANGRVDVESSTFESAANYTCHQGFRLIGPESLMCGDRGEWQPAT 656
>AC024882-17|AAF60937.1| 321|Caenorhabditis elegans Serpentine
receptor, class z protein28 protein.
Length = 321
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +3
Query: 171 TRNATMQQSTHILIDALMLLSIYYAIFRSCKLFICFTPSYLCLFTSMNTSSIC*QKI 341
T NA + ST IL L L I+ +F L + +L F S SSI QK+
Sbjct: 83 TSNAFLNLSTLILCVCLFYLYIFDQVFHLIILLLAIQRFFLFYFPSSERSSIKFQKL 139
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 47 FNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHV--VKRQVF 169
F+S N + + +S+ Q PLP HY RPH +K VF
Sbjct: 6 FSSRRNCFPCAPLYSSLLAQCVPLPLQHHYHRPHYESLKSSVF 48
>L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated
protein 36 protein.
Length = 1249
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 233 NLLRYLSILQTIYLFHAKLSVSFYE--HEHVVDLLAEDLEPAPQTR 364
NL + IYL A L VS +E ++HVVD +AE PA R
Sbjct: 923 NLTMLGQAFKAIYLDKAVLGVSGFEFAYDHVVDTMAEHGCPASDDR 968
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 62 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 163
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 62 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 163
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 62 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 163
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 62 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 163
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 62 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 163
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical
protein C18F10.2 protein.
Length = 711
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 27 LRCCTSNSTLQSIYTRNRTLQTLSGSKLRLCQLTAITDGRTLS 155
L C + S +++ +T+ +++ SK +LC +A+T LS
Sbjct: 205 LLSCFNISMMKTATVSGQTIGSIACSKFKLCSFSAVTSNPCLS 247
>AL021487-12|CAA16358.2| 324|Caenorhabditis elegans Hypothetical
protein Y45F10B.6 protein.
Length = 324
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +3
Query: 108 LRLCQLTAITDGRTLSRGKSFTRNATMQQSTHILIDALMLLSIYYAIFRSCKLFICFTPS 287
L LC L + R L + + ++AT+Q++ + L + + Y +C L PS
Sbjct: 215 LILCTLLNLFLYRKLKKMSNHGKSATLQRAEYSLTLTTFSMLLSYITNLACALMFIIFPS 274
Query: 288 YLCLFTSM 311
L F ++
Sbjct: 275 MLVYFIAL 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,406,615
Number of Sequences: 27780
Number of extensions: 250672
Number of successful extensions: 584
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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