Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0541.Seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    29   0.036
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 0.036
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
 Frame = +3

Query: 90  SSLGGPRNHRAVYHWIRVPVV*QSSVGILQSVTRKRGDFSAAATSKNSSTRDLPLRDFMA 269
           +++G P ++R + H +  P+   +S G +   T  RGD     TS NS+ +         
Sbjct: 77  TTIGSPISNR-IRHEMATPMATMNSYGSVG--TLGRGDLGGGDTSPNSALQRARADKTYR 133

Query: 270 RFFLEDSAHYLFYSLIFM---NVVPNLLILVPIFLFAL 374
           R +      Y + SLI M   N    +L L  I+ F +
Sbjct: 134 RSYTHAKPPYSYISLITMAIQNSPQKMLTLSEIYQFIM 171


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +1

Query: 109 VITVLCTIGYVFPLFNNPVSAFYKALLANAATSAL---RLHQRIPAREISL 252
           VI  L T+ Y+ P+  NP+  +    LAN  T  +   R++ ++  +++S+
Sbjct: 130 VIDYLFTV-YLLPIIINPLVLYEARKLANVVTDWVNFERIYYKLTKKKLSV 179


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 31  GPPKGIPALKAHIIANKIDVALWGVRV 111
           GP +    L AH++A    V L G+RV
Sbjct: 333 GPARSRRHLPAHLVAGTCFVQLIGMRV 359


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 288 SAHYLFYSLIFMNVVPNLLILVPIFLFALLH 380
           + + LFY  +  +V  NL   VP+ + AL H
Sbjct: 170 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 200


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 288 SAHYLFYSLIFMNVVPNLLILVPIFLFALLH 380
           + + LFY  +  +V  NL   VP+ + AL H
Sbjct: 126 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 156


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 81  NRRSSLGGPRNHRAVYHWIRV 143
           N R    GPR   AVY  +R+
Sbjct: 179 NIRLKRAGPRTESAVYEPVRI 199


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 134  PMVHSTVITRTPQRATS 84
            P VHS+ +   PQ +T+
Sbjct: 1797 PSVHSSTVVPPPQHSTT 1813


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -1

Query: 573 TNGLIKPQWPNNAMMSTTGNSTSRRAPRPGGCSATGTRP 457
           T G   PQ PN+ +  + G   S  +P     + + T P
Sbjct: 34  TLGQFSPQGPNSPVSFSMGGHGSLLSPSGNTPNKSSTSP 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,625
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)