Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0541.Seq
(687 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein. 27 0.73
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 25 1.7
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 25 3.0
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 24 3.9
AJ439353-5|CAD27927.1| 459|Anopheles gambiae putative G-protein... 24 3.9
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 24 3.9
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 3.9
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 6.8
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 23 9.0
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 23 9.0
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 23 9.0
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 23 9.0
>AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein.
Length = 420
Score = 26.6 bits (56), Expect = 0.73
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -1
Query: 546 PNNAMMSTTGNSTSRRAPRPG-GCSATGTRPGR*ADEPPTTNS 421
P A + G S S P P G ATGT+ EPP +S
Sbjct: 182 PAKASAPSAGKSLSNIQPTPPKGAGATGTQHSDQQQEPPRPSS 224
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 25.4 bits (53), Expect = 1.7
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -3
Query: 562 HQAAVAEQCHDEYDREQHISAS 497
H++AVA+ H++ DR Q I+ +
Sbjct: 1137 HRSAVADMIHEQSDRAQFITTT 1158
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 24.6 bits (51), Expect = 3.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 393 NTKQRVAAQIKRLAPILTNWARRS*K*VNRIDSARCPPGR 274
N + A I+++ P N RRS + R S R PP R
Sbjct: 238 NIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPAR 277
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 24.2 bits (50), Expect = 3.9
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 297 YLFYSLIFMNVVPNLLILVPIFLFALLHAAS 389
Y ++L+FM ++P LLIL+ +L + +S
Sbjct: 349 YTTFTLVFMFIIP-LLILIGTYLSTFMTISS 378
>AJ439353-5|CAD27927.1| 459|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 459
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 521 VVLIMALFGHCGLMSPFVYYYFVT 592
V +MAL + L PF Y+ +VT
Sbjct: 149 VAFVMALERYIALAKPFFYHKYVT 172
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 24.2 bits (50), Expect = 3.9
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 297 YLFYSLIFMNVVPNLLILVPIFLFALLHAAS 389
Y ++L+FM ++P LLIL+ +L + +S
Sbjct: 350 YTTFTLVFMFIIP-LLILIGTYLSTFMTISS 379
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 546 PNNAMMSTTGNSTSRRAPRPGG 481
P N TG T + PRPGG
Sbjct: 195 PGNVGPPRTGTPTQPQPPRPGG 216
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 6.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 179 KRYSQTRRLQRCGYIKEFQHERSPSP 256
+RY++TR R ++ Q ER P P
Sbjct: 1056 RRYNETRNAARRAATQQRQAERLPPP 1081
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.0 bits (47), Expect = 9.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 147 REHVSNGTQHGDYADPPKSYVYFIGNDVSFQGWDAFWWTSVACLL 13
RE + + G D P Y+ V G+ + WWT C+L
Sbjct: 384 REVLETASVAGKGMDEP--YMLQQVEGVGSTGYRSSWWTQFYCIL 426
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 23.0 bits (47), Expect = 9.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 147 REHVSNGTQHGDYADPPKSYVYFIGNDVSFQGWDAFWWTSVACLL 13
RE + + G D P Y+ V G+ + WWT C+L
Sbjct: 384 REVLETASVAGKGMDEP--YMLQQVEGVGSTGYRSSWWTQFYCIL 426
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 23.0 bits (47), Expect = 9.0
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 147 REHVSNGTQHGDYADPPKSYVYFIGNDVSFQGWDAFWWTSVACLL 13
RE + + G D P Y+ V G+ + WWT C+L
Sbjct: 362 REVLETASVAGKGMDEP--YMLQQVEGVGSTGYRSSWWTQFYCIL 404
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 23.0 bits (47), Expect = 9.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 33 STKRHPSLESSHHCQ*NRRSSLGGPRNHRAVYHWI 137
S R P + H Q RRSS R R+V +++
Sbjct: 60 SKNRMPPVPPPKHSQRRRRSSSPRTRQFRSVCYYV 94
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,710
Number of Sequences: 2352
Number of extensions: 14632
Number of successful extensions: 38
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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