Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0540.Seq
         (579 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109206-1|AAI09207.1|  552|Homo sapiens TREH protein protein.         86   7e-17
AK223143-1|BAD96863.1|  583|Homo sapiens trehalase (brush-border...    86   7e-17
AK223140-1|BAD96860.1|  583|Homo sapiens trehalase (brush-border...    86   7e-17
AB000824-1|BAA24381.1|  583|Homo sapiens trehalase protein.            83   5e-16

>BC109206-1|AAI09207.1|  552|Homo sapiens TREH protein protein.
          Length = 552

 Score = 86.2 bits (204), Expect = 7e-17
 Identities = 41/81 (50%), Positives = 52/81 (64%)
 Frame = +1

Query: 1   LQYIVIMGLANTGHPEAMRYATELATKWVRSNFEVWKQKAAMLEKYDATIXXXXXXXXEY 180
           LQ +VI GLA      A   A +LA  W+R+NF+V+ QK+AM EKYD +         EY
Sbjct: 440 LQDLVIRGLAKAPLRRAQEVAFQLAQNWIRTNFDVYSQKSAMYEKYDVSNGGQPGGGGEY 499

Query: 181 VVQTGFGWSNGVVMSLLNRYG 243
            VQ GFGW+NGVV+ LL+RYG
Sbjct: 500 EVQEGFGWTNGVVLMLLDRYG 520


>AK223143-1|BAD96863.1|  583|Homo sapiens trehalase (brush-border
           membrane glycoprotein) variant protein.
          Length = 583

 Score = 86.2 bits (204), Expect = 7e-17
 Identities = 41/81 (50%), Positives = 52/81 (64%)
 Frame = +1

Query: 1   LQYIVIMGLANTGHPEAMRYATELATKWVRSNFEVWKQKAAMLEKYDATIXXXXXXXXEY 180
           LQ +VI GLA      A   A +LA  W+R+NF+V+ QK+AM EKYD +         EY
Sbjct: 471 LQDLVIRGLAKAPLRRAQEVAFQLAQNWIRTNFDVYSQKSAMYEKYDVSNGGQPGGGGEY 530

Query: 181 VVQTGFGWSNGVVMSLLNRYG 243
            VQ GFGW+NGVV+ LL+RYG
Sbjct: 531 EVQEGFGWTNGVVLMLLDRYG 551


>AK223140-1|BAD96860.1|  583|Homo sapiens trehalase (brush-border
           membrane glycoprotein) variant protein.
          Length = 583

 Score = 86.2 bits (204), Expect = 7e-17
 Identities = 41/81 (50%), Positives = 52/81 (64%)
 Frame = +1

Query: 1   LQYIVIMGLANTGHPEAMRYATELATKWVRSNFEVWKQKAAMLEKYDATIXXXXXXXXEY 180
           LQ +VI GLA      A   A +LA  W+R+NF+V+ QK+AM EKYD +         EY
Sbjct: 471 LQDLVIRGLAKAPLRRAQEVAFQLAQNWIRTNFDVYSQKSAMYEKYDVSNGGQPGGGGEY 530

Query: 181 VVQTGFGWSNGVVMSLLNRYG 243
            VQ GFGW+NGVV+ LL+RYG
Sbjct: 531 EVQEGFGWTNGVVLMLLDRYG 551


>AB000824-1|BAA24381.1|  583|Homo sapiens trehalase protein.
          Length = 583

 Score = 83.4 bits (197), Expect = 5e-16
 Identities = 40/81 (49%), Positives = 50/81 (61%)
 Frame = +1

Query: 1   LQYIVIMGLANTGHPEAMRYATELATKWVRSNFEVWKQKAAMLEKYDATIXXXXXXXXEY 180
           LQ +VI GLA      A   A +LA  W+R+NF+V+ QK+AM EKYD +         EY
Sbjct: 471 LQDLVIRGLAKAPLRRAQEVAFQLAQNWIRTNFDVYSQKSAMYEKYDVSNGGQPGGGGEY 530

Query: 181 VVQTGFGWSNGVVMSLLNRYG 243
            VQ GFGW  GVV+ LL+RYG
Sbjct: 531 EVQEGFGWDEGVVLMLLDRYG 551


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,169,038
Number of Sequences: 237096
Number of extensions: 1137183
Number of successful extensions: 2245
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2244
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)