Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0539.Seq
(663 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 25 0.55
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 25 0.73
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 1.7
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 1.7
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 1.7
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 23 1.7
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.2
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 9.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.0
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 25.0 bits (52), Expect = 0.55
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 345 RGDVRTDGAGAHLHD 389
RG R DGAG LHD
Sbjct: 291 RGAARADGAGGPLHD 305
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 24.6 bits (51), Expect = 0.73
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Frame = +1
Query: 379 IFMISVFGV-----KNNGNIVFVIMLTLLQGLCGMCFGFVI 486
IF++ +FG +NN ++V+V++L +L+ L M V+
Sbjct: 249 IFLLLIFGSGSATPENNVSVVYVLILYILESLLYMVTKLVV 289
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 351 DVRTDGAGAHLHDIGVRRQE 410
D RT +G HL ++G+R ++
Sbjct: 158 DSRTSPSGQHLQELGLRLED 177
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 351 DVRTDGAGAHLHDIGVRRQE 410
D RT +G HL ++G+R ++
Sbjct: 158 DSRTSPSGQHLQELGLRLED 177
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 351 DVRTDGAGAHLHDIGVRRQE 410
D RT +G HL ++G+R ++
Sbjct: 158 DSRTSPSGQHLQELGLRLED 177
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -1
Query: 378 EHQRRLSAHHHELGDDVREQDLSGRHSRHPGSVQETLHPFHVNAD 244
+HQ L HH+ + ++++ S HP S+ L AD
Sbjct: 342 DHQAML--HHNPMSHHLKQEPSGFTSSNHPFSINRLLPTAESKAD 384
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 5.2
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Frame = +3
Query: 93 WRLATTTRSW----ATSRLTSWTPYTGIRTLRSQTS*LP 197
W +TTT W T R T+ P T T R T+ P
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 49 VEHKSDLLVGHVQPDL 2
V H + L+GH+Q DL
Sbjct: 128 VSHTVEHLLGHLQTDL 143
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 438 HDNEDDVPIILDAEHRYHEDEHQRRLSAHHHELGD 334
H+N++++ L + R ED+ RR++ + + D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVD 605
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 438 HDNEDDVPIILDAEHRYHEDEHQRRLSAHHHELGD 334
H+N++++ L + R ED+ RR++ + + D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVD 605
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 438 HDNEDDVPIILDAEHRYHEDEHQRRLSAHHHELGD 334
H+N++++ L + R ED+ RR++ + + D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVD 605
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 438 HDNEDDVPIILDAEHRYHEDEHQRRLSAHHHELGD 334
H+N++++ L + R ED+ RR++ + + D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVD 605
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,676
Number of Sequences: 336
Number of extensions: 3157
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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