Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0538X.Seq
(499 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 25 0.38
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 24 0.66
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 24 0.87
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 0.87
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 0.87
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 3.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 4.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 4.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 4.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 4.7
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 6.2
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 8.1
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 25.0 bits (52), Expect = 0.38
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 344 RGDVRTDGAGAHLHD 388
RG R DGAG LHD
Sbjct: 291 RGAARADGAGGPLHD 305
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 24.2 bits (50), Expect = 0.66
Identities = 16/77 (20%), Positives = 30/77 (38%)
Frame = -3
Query: 482 HEPEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGR 303
H + + Q Q +E+ M+ +HQ L HH+ + ++++
Sbjct: 307 HSNDLNMHQQHHQQNMSHEELSAMVNRCHPLSLSSDHQAML--HHNPMSHHLKQEPSGFT 364
Query: 302 HSRHPGSVQETLHPSTS 252
S HP S+ L + S
Sbjct: 365 SSNHPFSINRLLPTAES 381
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.8 bits (49), Expect = 0.87
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 350 DVRTDGAGAHLHDIGVRRQES 412
D RT +G HL ++G+R +++
Sbjct: 158 DSRTSPSGQHLQELGLRLEDA 178
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.8 bits (49), Expect = 0.87
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 350 DVRTDGAGAHLHDIGVRRQES 412
D RT +G HL ++G+R +++
Sbjct: 158 DSRTSPSGQHLQELGLRLEDA 178
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.8 bits (49), Expect = 0.87
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 350 DVRTDGAGAHLHDIGVRRQES 412
D RT +G HL ++G+R +++
Sbjct: 158 DSRTSPSGQHLQELGLRLEDA 178
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 3.5
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Frame = +3
Query: 93 WRLATTTRSW----ATSRLTSWTPYTGIRTLRSQTS*LP 197
W +TTT W T R T+ P T T R T+ P
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080
Score = 20.6 bits (41), Expect = 8.1
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 349 TTNWVTTCENRISPGDTPATQDRSRRPS 266
T+ W TT R + P T + RP+
Sbjct: 1048 TSPWWTTTTTRRTTTTRPTTTSTTTRPT 1075
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -3
Query: 437 HDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGD 333
H+N++++ L + R ED+ RR++ + + D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVD 605
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -3
Query: 437 HDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGD 333
H+N++++ L + R ED+ RR++ + + D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVD 605
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -3
Query: 437 HDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGD 333
H+N++++ L + R ED+ RR++ + + D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVD 605
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -3
Query: 437 HDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGD 333
H+N++++ L + R ED+ RR++ + + D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVD 605
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 49 VEHKSDLLVGHVQPDL 2
V H + L+GH+Q DL
Sbjct: 128 VSHTVEHLLGHLQTDL 143
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 20.6 bits (41), Expect = 8.1
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 401 RQESWEHRLRYHA 439
R+E W H L HA
Sbjct: 361 REEGWIHHLARHA 373
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,713
Number of Sequences: 336
Number of extensions: 2456
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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