Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0538X.Seq
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 33 0.17
10_01_0075 - 979335-979954,980136-980405,980949-980989,981563-98... 32 0.29
07_03_1080 + 23815232-23817040 31 0.68
01_02_0018 - 10233009-10233473,10234022-10234099 31 0.68
09_02_0383 - 8259156-8261843 30 1.2
02_02_0140 + 7125914-7126264,7126426-7126677,7126766-7126861,712... 30 1.2
05_01_0193 + 1400963-1401083,1401671-1401888,1401983-1402172,140... 29 1.6
03_05_0301 + 22928864-22929787 29 1.6
03_01_0221 + 1752500-1752868,1753301-1753436,1753850-1753989,175... 29 1.6
01_06_1250 + 35726115-35726255,35727435-35727479,35728570-357286... 29 1.6
05_06_0174 - 26149663-26149885,26150353-26151701 29 2.1
02_02_0310 - 8842286-8843314 29 2.1
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 29 2.7
08_01_0397 - 3509186-3510291,3510322-3512335 29 2.7
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 29 2.7
03_02_0698 - 10496316-10498127,10498539-10498559 29 2.7
12_02_0885 + 23994354-23994584,23994987-23995342,23995549-239956... 28 4.8
09_01_0018 - 391827-392254,392553-392608,393976-394005,394666-39... 28 4.8
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 28 4.8
02_01_0586 - 4334896-4335177,4336340-4338007 28 4.8
02_05_0460 - 29224525-29224620,29225525-29226625 27 6.3
02_01_0526 - 3830705-3830932,3831684-3831748,3831958-3832104,383... 27 6.3
06_01_0264 + 1948497-1948579,1948702-1948748,1948857-1948929,194... 27 8.4
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 27 8.4
03_04_0147 + 17690840-17691687,17692328-17692532,17693048-176931... 27 8.4
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 27 8.4
01_06_0264 + 28005997-28006823,28007107-28007290,28007603-28007701 27 8.4
01_06_0241 - 27813076-27813622,27813695-27814125 27 8.4
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 404 DAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPGSVQET 270
+ E RY ED+ R H + D+ + +G+H R G +ET
Sbjct: 505 EGERRYREDDGHGRSDRHKRDESDNRKRSPDTGKHRREDGGHRET 549
>10_01_0075 -
979335-979954,980136-980405,980949-980989,981563-981663
Length = 343
Score = 31.9 bits (69), Expect = 0.29
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = -3
Query: 491 GRYHEPEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDL 312
G ++EP A S + D +L A H +HQ+ + HHH+ R+
Sbjct: 69 GAFYEPPARNLGLQLMSSVPADRDTKHLLSATPFLHHHQHQQYVPHHHHQ-PHHPRDCGT 127
Query: 311 SGRHSRHPGSVQETLHPSTSTLTM 240
+ + + V + P+T TL M
Sbjct: 128 NANANGNGNGVGYGMMPATHTLRM 151
>07_03_1080 + 23815232-23817040
Length = 602
Score = 30.7 bits (66), Expect = 0.68
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -3
Query: 401 AEHRYHEDEHQRRLSAHHHELG-DDVREQDLSGRHSRHPGSVQETLHPSTSTLTMSGP 231
+++ Y E + +A HH+L D+ S RH H VQ+ P++ST T + P
Sbjct: 76 SQYYYLEPYQEECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQQQPPASSTPTGTAP 133
>01_02_0018 - 10233009-10233473,10234022-10234099
Length = 180
Score = 30.7 bits (66), Expect = 0.68
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +1
Query: 64 LVQGLR*GSAGDLRLQPEAGRHPD*LHGPHIRE*EPFVHRLRSSR--RHINHRI-LPRRG 234
LV+G+ G R E GR P RE +P V S+R R + + L R
Sbjct: 41 LVEGVADGCIWPARQWLEEGRKP-----AWRREAQPMVAEAGSAREARAVEMEVGLAREA 95
Query: 235 PDIVSVDVEGWRVSWTDPGWRE 300
+V ++ RV W P WRE
Sbjct: 96 RPVVGGRIDARRVRWRRPAWRE 117
>09_02_0383 - 8259156-8261843
Length = 895
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 364 VCPHITTNWVTTCENRISPGDTPATQDRSRRP 269
VCPH+ +W+ E+ I D T+ +R P
Sbjct: 66 VCPHVVRDWMEDAEHAIGEADEIKTEYDNRTP 97
>02_02_0140 +
7125914-7126264,7126426-7126677,7126766-7126861,
7127013-7127187,7127283-7127363,7127451-7127548,
7127828-7127920,7128607-7128678,7128998-7129117,
7129210-7129260,7130026-7130211,7130355-7130411
Length = 543
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 473 EAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVR 324
E HA L SQH D+P++ + D QR+ H L D++R
Sbjct: 181 EDHATDVLSMSQHIPGLDIPILQLGDIVISIDTAQRQAEERGHTLHDEIR 230
>05_01_0193 +
1400963-1401083,1401671-1401888,1401983-1402172,
1402391-1402782,1402971-1403381
Length = 443
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 68 YRDF-AKGLLETCDYNPKLGDIPIDFMDPIYGNKNPS 175
YRD + +L DYNPKL D + + P G+K+ S
Sbjct: 214 YRDLKSPNILLDKDYNPKLSDFGLAKLGPFEGDKHVS 250
>03_05_0301 + 22928864-22929787
Length = 307
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -3
Query: 395 HRYHEDEHQRRLSAHHHELGDDVREQD-LSGRHSRH--PGSVQETLHPSTSTL 246
H +H HQ+ ++A H L + R+QD L R + H G+ P +S+L
Sbjct: 178 HPHHHHHHQQMVNAQHMALVEVARDQDMLRARQAGHANAGATVAVEAPGSSSL 230
>03_01_0221 +
1752500-1752868,1753301-1753436,1753850-1753989,
1754083-1754206,1754960-1755363
Length = 390
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 59 QFSYRDF-AKGLLETCDYNPKLGDIPIDFMDPIYGNKN 169
Q YRDF A +L DY PKL D + P+ G +
Sbjct: 200 QIIYRDFKASNILLDVDYTPKLSDFGLAKNGPVAGRSH 237
>01_06_1250 +
35726115-35726255,35727435-35727479,35728570-35728692,
35728804-35728911,35729247-35729360,35729440-35729613,
35729881-35729976,35730165-35730272,35730389-35730496,
35730595-35730743,35731255-35731408,35732487-35732647,
35733739-35733945,35733968-35734025,35734058-35734222,
35734305-35734388,35735670-35735863,35735952-35736011,
35736203-35736407
Length = 817
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 276 LDRSWVAGVSPGEILFSHVVTQFVVMCGQTALVLIFMISVFGVKNHGNIVFVIMLTLLQG 455
+D SW S L S + ++M G T + L ++S F K HGN + + L LLQ
Sbjct: 512 VDPSWRGSRSELPFLNSLKMKMSILM-GVTQMNLGIVLSYFDAKFHGNALDISFLLLLQV 570
Query: 456 LCG 464
+ G
Sbjct: 571 IEG 573
>05_06_0174 - 26149663-26149885,26150353-26151701
Length = 523
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 344 ELGDDVREQDLSGRHSRHPGSVQETLHPSTSTLTMS 237
ELGD R Q+L +S + GS+ ETL S T+S
Sbjct: 304 ELGDIARLQELRLANSGYSGSIPETLGRLASLTTLS 339
>02_02_0310 - 8842286-8843314
Length = 342
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/71 (22%), Positives = 30/71 (42%)
Frame = -3
Query: 485 YHEPEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSG 306
+H H ++ +H+ D+ ++ +H +RR HHHE + RE+
Sbjct: 190 HHRHHHHHHDENEEDEHEQADEASPAVERLISFH----RRRHHHHHHEDDHEQREEGAPM 245
Query: 305 RHSRHPGSVQE 273
+ RH +E
Sbjct: 246 KRFRHHHEEEE 256
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = -3
Query: 449 QQSQHDNEDDVPMILDAEHRYHEDEHQRRLSA--HHHELGDDVREQDLSGRHSRHPGSVQ 276
+ E+ PM H E+E + R HHH DD RE + R +
Sbjct: 233 EDDHEQREEGAPMKRFRHHHEEEEESEMRTKRFHHHHHKDDDERELEEMARRWIRKALMS 292
Query: 275 ETLH 264
+H
Sbjct: 293 SRMH 296
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Frame = -3
Query: 482 HEPEA--HAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVR---EQ 318
HEPE+ A T Q P++ + R H+DEH++ H R
Sbjct: 123 HEPESGGDADDTKGDRQSQRVPKSPLLTREKERKHKDEHRKSYPKDSHSKEQSRRSPSRH 182
Query: 317 DLSGRHSRHPGSVQET 270
S H+RH ++T
Sbjct: 183 HSSQDHARHHSRSRDT 198
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 443 SQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHH--ELGDDVREQDLSGRHSRH 291
S+H D + R+H D + R S+ HH E DD R++D R RH
Sbjct: 10 SKHHRRDKEKDRERSSSRHHRDRDRERSSSRHHHREDRDDDRDRD-RDRERRH 61
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 317 PVLARRHPVRGDVRTDGAGAHLHDIG 394
P A + P DVR +G GA+LHD G
Sbjct: 81 PAAAEKAPEE-DVRAEGEGAYLHDAG 105
>03_02_0698 - 10496316-10498127,10498539-10498559
Length = 610
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 318 LFSHVVTQFVVMCGQTALVLIFMISVFGVKNHGNIVFVIMLTLLQGLCGMCFG 476
++ H T F+++C A LIF ++ V + V+ + +L GLCG +G
Sbjct: 407 MYVHAFT-FILLC--VAPFLIFSVTALNVHDDDIRDTVVSVGVLLGLCGFLYG 456
>12_02_0885 +
23994354-23994584,23994987-23995342,23995549-23995663,
23995918-23995962,23996151-23996333,23996802-23996978,
23997345-23997476,23997587-23997766,23999116-23999247,
24000212-24000280,24000377-24000490,24000579-24000806,
24001343-24001486
Length = 701
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = -3
Query: 446 QSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPGSVQ 276
QS+ + EDD + + H HQ++ H + DD + D R H V+
Sbjct: 26 QSEEEEEDDDEAVDFVDEDDHPHPHQQQQQLRHQVVDDD-DDDDAHARSGYHSEEVE 81
>09_01_0018 -
391827-392254,392553-392608,393976-394005,394666-394736,
394819-394948,397627-397717,397798-397919,398014-398303
Length = 405
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 479 EPEAHAAQT-LQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGR 303
EP A + ++ + D ED+ PM +D + + +H R S R++D +
Sbjct: 178 EPRRSALEDDFEEEEEDKEDEQPMDIDEPNGREKHDHYRGRS--------PTRDRDRERK 229
Query: 302 HSRH 291
H RH
Sbjct: 230 HERH 233
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 404 DAEHRYHEDEHQRRLSAHHHELGDDV 327
D H YH HQRR HHH DV
Sbjct: 552 DHHHHYHGGHHQRR--RHHHPPAWDV 575
>02_01_0586 - 4334896-4335177,4336340-4338007
Length = 649
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +2
Query: 119 LGDIPIDFMDPIYGNKNPSFTDFVAPGVILTIVFFLAVALTSSALTW 259
L + + + +PI N +PS T AP + + +L + +S + W
Sbjct: 64 LRSLHLKYAEPISPNPSPSPTSAAAPAALNAVKLYLHIGGSSPSARW 110
>02_05_0460 - 29224525-29224620,29225525-29226625
Length = 398
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/53 (22%), Positives = 19/53 (35%)
Frame = -3
Query: 389 YHEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPGSVQETLHPSTSTLTMSGP 231
Y H E D+ +++ G H + Q+ LHP + S P
Sbjct: 3 YKRSSHVEEEEEEEEEEDDEEEDEEEQGHHQYTTAAAQQQLHPQVLGSSASSP 55
>02_01_0526 -
3830705-3830932,3831684-3831748,3831958-3832104,
3832208-3832256
Length = 162
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = -3
Query: 497 ASGRYHEPEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQ 318
+SG E E + ++S+ + D+ AE E+E +RR H + G D +E+
Sbjct: 15 SSGEEEERERKKRRDKKESRRSSRDE-----QAEEE-EEEERRRRKKKKHGDRGKD-KER 67
Query: 317 DLSGRHSR 294
D +HS+
Sbjct: 68 DSKEKHSK 75
>06_01_0264 +
1948497-1948579,1948702-1948748,1948857-1948929,
1949399-1949519,1949630-1949767,1951074-1951190,
1951454-1951549,1951825-1951974
Length = 274
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -1
Query: 376 STSAVCPHITTNWVTTCENRISPG--DTPATQDR-SRRPSILPRQR*RCQGHG 227
S+ + CP++T + T RIS G + AT+ R S P PR R G G
Sbjct: 45 SSESSCPNVTAGFYTAVNRRISLGLSNKRATRARISMMPVGTPRVPYRTPGEG 97
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = -3
Query: 401 AEHRYHEDEHQRRLSAHHHELGDDVREQDLSGRHSRH 291
++H+ H+ +HQ+ HHH+ + + +S+H
Sbjct: 29 SQHQQHQHQHQQPPHPHHHQYVQRQPQPQQTPHNSQH 65
>03_04_0147 +
17690840-17691687,17692328-17692532,17693048-17693199,
17693306-17693597,17693807-17693962,17694561-17694764,
17694875-17694987,17695078-17695192,17695293-17695382,
17695463-17695666,17695764-17695859,17696094-17696216,
17696308-17696400,17696477-17696641,17697179-17697268,
17697356-17697520
Length = 1036
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 95 ETCDYNPKLGDIPIDFMDPI 154
E D LGDIP +F+DPI
Sbjct: 932 EAMDAEAMLGDIPDEFLDPI 951
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 467 HAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELG 336
H AQ HD ++ H +H ++ Q++ HHH LG
Sbjct: 21 HMAQQQAAPPHDPQEHHHHHHHGHHGHHHEQQQQQ--QHHHHLG 62
>01_06_0264 + 28005997-28006823,28007107-28007290,28007603-28007701
Length = 369
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 316 ISPGDTPATQDRSRRPSILPRQR*RCQGHGEE 221
+ P PAT +S RP + P Q RC+ H E
Sbjct: 23 VGPAPAPATASQSNRP-VPPLQLPRCRCHRSE 53
>01_06_0241 - 27813076-27813622,27813695-27814125
Length = 325
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = -3
Query: 479 EPEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGRH 300
EPEA+ QQS H N +AE E H+ S H +V + S R
Sbjct: 23 EPEANHESANQQSHHSNRSHRTASRNAE---VEQPHRSNRSHHTASRNAEVEQSHCSHRA 79
Query: 299 SRH 291
+ H
Sbjct: 80 ASH 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,357,800
Number of Sequences: 37544
Number of extensions: 308620
Number of successful extensions: 1170
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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