Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0538X.Seq
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_49938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 2.1
SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4) 29 2.1
SB_643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_32857| Best HMM Match : TolA (HMM E-Value=1.1) 29 2.8
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 29 2.8
SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06) 29 2.8
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 2.8
SB_57776| Best HMM Match : EB (HMM E-Value=2.9) 28 3.7
SB_46992| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_15815| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 28 4.9
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 28 4.9
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 27 6.5
SB_21450| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_3976| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_56186| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 27 6.5
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 27 6.5
SB_21570| Best HMM Match : AT_hook (HMM E-Value=2) 27 6.5
SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_54473| Best HMM Match : DLIC (HMM E-Value=0) 27 8.6
SB_54208| Best HMM Match : fn3 (HMM E-Value=0) 27 8.6
SB_50324| Best HMM Match : 7tm_1 (HMM E-Value=9.7e-30) 27 8.6
SB_43850| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 27 8.6
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 27 8.6
SB_23891| Best HMM Match : P60 (HMM E-Value=2.2) 27 8.6
>SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 34.7 bits (76), Expect = 0.043
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -3
Query: 482 HEPEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELG 336
H P + + S D DD P+ D E EDE + A+HHE G
Sbjct: 28 HGPAGRSLSRKETSGKDGGDDTPIEDDIEEEEIEDEDEGSAKANHHESG 76
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 30.7 bits (66), Expect = 0.70
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -3
Query: 410 ILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPGSVQETLHPSTSTL 246
I AEH+ E E QR+L H + + RE+DL V + + T+ +
Sbjct: 408 IKKAEHKAVESEKQRKLENEKHSMELEAREKDLLSDKQSELARVSKRMESKTNEM 462
>SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -3
Query: 476 PEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQD 315
PE AA HD++DD D + H+D+H HHH+ DD + D
Sbjct: 88 PEVMAAAD-DDDDHDDDDDDDHDDDHDDDDHDDDH------HHHDDDDDDHDDD 134
>SB_49938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 882
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 293 HPGSVQETLHPSTSTLTM 240
HPG+VQ TLHP T T+
Sbjct: 690 HPGTVQSTLHPCTVQFTL 707
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 293 HPGSVQETLHPSTSTLTM 240
HPG+VQ TLHP T T+
Sbjct: 681 HPGTVQSTLHPGTVQSTL 698
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 395 HRYHEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPGS 282
H YHED+H S+ G+ + +QD+S S PG+
Sbjct: 806 HSYHEDQHAEHSSSSKQGGGEGLHKQDVSQTPS-FPGN 842
>SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 638
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 87 VCWRLATTTRSWATSRLTSWTPYTGIRTLRSQT 185
V W +T SW SR +++ P+ G+R + Q+
Sbjct: 208 VLWSDSTIVLSWLRSRSSAFKPFVGVRIVEIQS 240
>SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4)
Length = 177
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 416 PMILDAEHRYHEDEHQRRLSAHHH 345
P L+ H YH+ +HQ HHH
Sbjct: 67 PNCLEMTHLYHDQQHQWNHQHHHH 90
>SB_643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = -2
Query: 201 TPGATKSVNEGFLFPYMGSMKSIGMS-PSFGL*SQVSSRP-----LAKSLYENCMSRLSI 40
TP + G P G+M S+GMS P G S+V S P + ++ N R+ I
Sbjct: 316 TPVQANITSPGMSTPVQGNMTSLGMSTPVQGAESKVKSPPENTERIPVKVFANRNYRIRI 375
Query: 39 SPICWLDMSS 10
+ + W M++
Sbjct: 376 ARLIWEGMAN 385
>SB_32857| Best HMM Match : TolA (HMM E-Value=1.1)
Length = 448
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = -3
Query: 386 HEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPGSVQETLH 264
HED H + H + D+ R + RH + +E H
Sbjct: 140 HEDRHDEERNDEHEDRHDEERNNEHEDRHDEERNNEEEDRH 180
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 398 EHRYHEDEHQRRLSAHHHELGDDVRE 321
+HR H EH RR H G+D +E
Sbjct: 849 KHRKHSREHSRRRHQRKHHKGNDAQE 874
>SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06)
Length = 781
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 244 VSVDVEGWRVSWTDPGWRECLP 309
V+++V+G +V WTDPG R C+P
Sbjct: 413 VTLEVQG-KVKWTDPG-RACIP 432
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 434 DNEDDVPMILDAEHRYHEDEHQRRLSAHHHELG-DDVREQ 318
DN+ DV + D+ H YH + S HHHE DD E+
Sbjct: 648 DNDGDVNVNDDSRHNYHYTQK----SKHHHEKNIDDSNEK 683
>SB_57776| Best HMM Match : EB (HMM E-Value=2.9)
Length = 669
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 407 LDAEHRYHEDEHQRRLSAHHHELGDDVRE 321
LD + ++H+D HQ + HE+ D+ E
Sbjct: 58 LDVDRKFHDDSHQLKYFCPPHEIHFDLSE 86
>SB_46992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 151 GVHEVNRDVAQLRVVVASLQQTLSEVPVRELYVPV 47
GV++ N D QLR ++ S Q P++ LY PV
Sbjct: 81 GVYKYNNDYEQLRPLLLSRPQPALLRPLKPLYSPV 115
>SB_15815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -3
Query: 407 LDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPGSVQETLHPSTS 252
LD + R H D H H DD+++ + GR RH G+V T S S
Sbjct: 617 LDVQIRPHPDSH-----LHKGVSTDDLKDLLMGGRTYRHKGTVDGTNQHSNS 663
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 470 AHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHE 342
A Q QQ QH ++++ P A H+ D+H+ HHH+
Sbjct: 5 ASRRQQQQQHQHQDKNNNPPQPSAHHQCQHDKHR----DHHHD 43
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 440 QHDNEDDVPMILDAEHRY-HEDEHQRRLSAHHHELGDDVREQDLSGRHSR 294
+H++ DD H HEDE +R S HE +D RE + SR
Sbjct: 213 RHEDHDDATPRRSRSHSLRHEDEEERSPSGGRHE-REDSREPSSAEESSR 261
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -3
Query: 395 HRYHEDEHQRRLSAHHHELGDDVREQDLSGRH----SRHPGSVQETLHPST 255
H H+D RR +H D+ GRH SR P S +E+ S+
Sbjct: 214 HEDHDDATPRRSRSHSLRHEDEEERSPSGGRHEREDSREPSSAEESSRTSS 264
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 QIWLDMSNQQIGLMLNRDIQFSYRDFAKGLLETCDYNPKLGDIPIDFMDPI-YGNK 166
QI L+M+ + + R +QF R G + Y K +P+ + D I + NK
Sbjct: 1410 QILLEMTVSKRFFLKRRLMQFVLRHVTYGEINCIQYKAKAEPVPLSYRDSISFNNK 1465
>SB_21450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/76 (23%), Positives = 25/76 (32%)
Frame = -3
Query: 482 HEPEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGR 303
H+ H S+HD+ DD D+ + S H++ DD D
Sbjct: 27 HDDSEHDDSEHDDSEHDDHDDSEHDDSKHDNSKHDDSKHDDSEHNYNEHDDSEHDDSEHD 86
Query: 302 HSRHPGSVQETLHPST 255
S H S H T
Sbjct: 87 DSEHETSYLLLPHNQT 102
>SB_3976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 87 VCWRLATTTRSWATSRLTSWTPYTGIR 167
V W +T SW SR +++ P+ G+R
Sbjct: 357 VLWSDSTIVLSWLRSRSSAFKPFVGVR 383
>SB_56186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 87 VCWRLATTTRSWATSRLTSWTPYTGIR 167
V W +T SW SR +++ P+ G+R
Sbjct: 75 VLWSDSTIVLSWLRSRSSAFKPFVGVR 101
>SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 192
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Frame = -3
Query: 497 ASGRYHEPEAHAAQTLQQSQHD---NEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDV 327
A G E ++ +HD N++D + + HED H + + D+
Sbjct: 7 AEGNSTPSEKRVPGKEEEDRHDEERNDEDEDRHDEERNNEHEDRHDEERNDEDEDGHDEE 66
Query: 326 REQDLSGRHSRHPGSVQETLH 264
R + RH + E H
Sbjct: 67 RNNEHEDRHDEERNNEHEDRH 87
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 449 QQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHE 342
Q + H +D V D HR + +H+R+ + HH +
Sbjct: 646 QDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHRQ 681
>SB_21570| Best HMM Match : AT_hook (HMM E-Value=2)
Length = 148
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 383 EDEHQRRLSAHHHELGDDVREQDLS---GRHSRHPGSVQETL 267
+ HQ + HHH+ +R +DL H +PG Q+ L
Sbjct: 9 QHHHQDQALQHHHKANTTLRSRDLEKHRHHHKENPGLHQQCL 50
>SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Frame = -3
Query: 482 HEPEAHAAQTLQQSQHDNEDDVPMIL-----DAEHRYHEDEHQRRLSAHHHELGDDVREQ 318
H EAH+ ++ + +P + D + YH H + HHH L + +
Sbjct: 434 HHQEAHSGGHAH-TERGSSSHLPQLTNVSNDDNKEAYHMLVHPDNIHDHHHYLPYEANKD 492
Query: 317 DLSGRH 300
+ GRH
Sbjct: 493 NKKGRH 498
>SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = -3
Query: 491 GRYHEPEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDL 312
G E + + Q HD+++D DA HR H DE Q + E DD + +
Sbjct: 407 GHPDEQDDNQHQDEVDGGHDDDEDDDDD-DARHRPHMDESQGDVVVMDEEADDDDDDDED 465
Query: 311 SGRHSRHPGSVQE 273
GS+ E
Sbjct: 466 DDDDDEDGGSLME 478
>SB_54473| Best HMM Match : DLIC (HMM E-Value=0)
Length = 1401
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = +1
Query: 256 VEGWRVSWTDPGWR--ECL 306
VEG RVS+ PGWR ECL
Sbjct: 238 VEGSRVSYRYPGWRGAECL 256
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = +1
Query: 256 VEGWRVSWTDPGWR--ECL 306
VEG RVS+ PGWR ECL
Sbjct: 598 VEGSRVSYRCPGWRGAECL 616
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = +1
Query: 256 VEGWRVSWTDPGWR--ECL 306
VEG RVS+ PGWR ECL
Sbjct: 668 VEGSRVSYRCPGWRGAECL 686
>SB_54208| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1292
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 109 VVASLQQTLSEVPVRELYVPVEHKSDLLVGH 17
+ A + TL+ +PV + VP EH + +L G+
Sbjct: 808 ITAQNRTTLTTIPVSWVPVPTEHMNGVLTGY 838
>SB_50324| Best HMM Match : 7tm_1 (HMM E-Value=9.7e-30)
Length = 384
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 159 PYMGSMKSIGMSPSFGL*SQVSS-RPLAKSLYENCMSRLSISPICWLDMSSQI 4
PY+ S + +P GL Q + +P ++Y NC + + +C++++ +I
Sbjct: 159 PYLASGEKYTFNPGKGLCFQKPNLKPATFAIYFNCSFSMVVLTMCYINIFRKI 211
>SB_43850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.1 bits (57), Expect = 8.6
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 261 RME--GLLDRSWVAGVSPGEILFSHVVTQFVVMCGQTALVLIFMISVFGVKNHGNIVFVI 434
RME GL+DRS V + EIL +VV + G+ A +F G+++H V V
Sbjct: 1547 RMEELGLMDRSPVLQLDQWEILRENVVLNRKL--GEGAFGTVFGGEAKGIRDHMEWVPVA 1604
Query: 435 MLTLLQG 455
+ TL G
Sbjct: 1605 VKTLKVG 1611
>SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 890
Score = 27.1 bits (57), Expect = 8.6
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Frame = -3
Query: 497 ASGRYHEPEAHAAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQ 318
A R+ + + ++ L H +L + H Y R L++ HH
Sbjct: 522 AQNRWMDRNSSKSRVLASLHHYRNSSKSRVLASLHHYRNSSKSRVLASLHHYRNSSKSRV 581
Query: 317 DLSGRHSRHPGS--VQETLH--PSTSTLTMSG 234
S H R+ V +LH +++T+T SG
Sbjct: 582 LASLHHYRNSSKSRVLASLHHYRNSTTITSSG 613
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = -1
Query: 466 MPHRPCSKVSMITKTMFP*FLTPNTDIMKMSTSAVCPHITTNWVTTCENRISPGDTPAT 290
+PH S + +I T P TP+T I T PH + T I P TP T
Sbjct: 227 LPHIQASLLPLIPNTSIPPTPTPHTSIPPTPT----PHTSIPPTPTPHTSIPPTPTPHT 281
>SB_23891| Best HMM Match : P60 (HMM E-Value=2.2)
Length = 1167
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 89 LLETCDYNPKLGDIPIDFMDPIYGNKNPSFTDFVAPGVILTIVFFLAVALTSSALTW 259
+L C Y GD+PI +Y + + + A G++LT+ ++ TSS + +
Sbjct: 1030 ILSPCRYLNIGGDVPIGDAFKLYWHFD-RYEKNGAVGIVLTLFLYIVTLFTSSTILY 1085
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,453,324
Number of Sequences: 59808
Number of extensions: 355288
Number of successful extensions: 1230
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -