BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0538X.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018147-1|AAH18147.1| 666|Homo sapiens Leo1, Paf1/RNA polymera... 36 0.10
AY302186-1|AAP68819.1| 666|Homo sapiens replicative senescence ... 36 0.10
AK055762-1|BAB71006.1| 425|Homo sapiens protein ( Homo sapiens ... 36 0.10
D13635-1|BAA02799.2| 1086|Homo sapiens KIAA0010 protein. 31 1.7
DQ341187-1|ABC68221.1| 2129|Homo sapiens dedicator of cytokinesi... 31 1.7
DQ118680-1|AAZ38452.1| 1990|Homo sapiens dedicator of cytokinesi... 31 1.7
DQ118679-1|AAZ38451.1| 1992|Homo sapiens dedicator of cytokinesi... 31 1.7
BC112387-1|AAI12388.1| 383|Homo sapiens DOCK7 protein protein. 31 1.7
BC016392-1|AAH16392.1| 624|Homo sapiens DOCK7 protein protein. 31 1.7
AL451044-2|CAI13105.1| 1302|Homo sapiens dedicator of cytokinesi... 31 1.7
AL451044-1|CAI13104.1| 2109|Homo sapiens dedicator of cytokinesi... 31 1.7
AL138847-2|CAI22995.1| 2109|Homo sapiens dedicator of cytokinesi... 31 1.7
AK125049-1|BAC86032.1| 1520|Homo sapiens protein ( Homo sapiens ... 31 1.7
AK055905-1|BAB71042.1| 741|Homo sapiens protein ( Homo sapiens ... 31 1.7
AK055493-1|BAB70933.1| 626|Homo sapiens Apex nuclease. protein. 31 1.7
AB051558-1|BAB21862.1| 1302|Homo sapiens KIAA1771 protein protein. 31 1.7
AC004975-1|AAD51453.1| 415|Homo sapiens unknown protein. 31 2.2
BC112355-1|AAI12356.1| 699|Homo sapiens histidine-rich calcium-... 30 3.9
M60052-1|AAA88071.1| 699|Homo sapiens histidine-rich calcium bi... 29 6.8
DQ205685-1|ABA27099.1| 423|Homo sapiens mitochondrial ribosomal... 29 6.8
BC094691-1|AAH94691.1| 699|Homo sapiens histidine rich calcium ... 29 6.8
BC069802-1|AAH69802.1| 699|Homo sapiens histidine rich calcium ... 29 6.8
BC069795-1|AAH69795.1| 699|Homo sapiens histidine rich calcium ... 29 6.8
BC000041-1|AAH00041.1| 423|Homo sapiens mitochondrial ribosomal... 29 6.8
AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-l... 29 6.8
AL357673-2|CAH73897.1| 423|Homo sapiens mitochondrial ribosomal... 29 6.8
AL161644-8|CAI23564.1| 423|Homo sapiens mitochondrial ribosomal... 29 6.8
AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein. 29 6.8
AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin l... 29 6.8
AF325707-1|AAG52881.1| 423|Homo sapiens ribosomal protein L2 pr... 29 6.8
AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein. 29 6.8
>BC018147-1|AAH18147.1| 666|Homo sapiens Leo1, Paf1/RNA polymerase
II complex component, homolog (S. cerevisiae) protein.
Length = 666
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 464 AAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPG 285
A+ + Q+ ++++ P + D E + D+ + + S H DD EQD +R
Sbjct: 219 ASDNDDEKQNSDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSD 278
Query: 284 SVQETL 267
S E L
Sbjct: 279 SEDEVL 284
>AY302186-1|AAP68819.1| 666|Homo sapiens replicative senescence
downregulated leo1-like protein protein.
Length = 666
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 464 AAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPG 285
A+ + Q+ ++++ P + D E + D+ + + S H DD EQD +R
Sbjct: 219 ASDNDDEKQNSDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSD 278
Query: 284 SVQETL 267
S E L
Sbjct: 279 SEDEVL 284
>AK055762-1|BAB71006.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ31200 fis, clone KIDNE2000574, weakly similar to
Staphylococcus epidermidis putative cell-surface adhesin
SdrF ).
Length = 425
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 464 AAQTLQQSQHDNEDDVPMILDAEHRYHEDEHQRRLSAHHHELGDDVREQDLSGRHSRHPG 285
A+ + Q+ ++++ P + D E + D+ + + S H DD EQD +R
Sbjct: 219 ASDNDDEKQNSDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSD 278
Query: 284 SVQETL 267
S E L
Sbjct: 279 SEDEVL 284
>D13635-1|BAA02799.2| 1086|Homo sapiens KIAA0010 protein.
Length = 1086
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -2
Query: 207 NMTPGATKSVNEGFLFPYMGSMKSIGMSPSFGL*SQVSSRPLAKSLYENCMSRL 46
N G K+ NEG L+P + +G SF +R L K+LYEN + L
Sbjct: 789 NPNQGFFKTTNEGLLYPNPAAQMLVG--DSFARHYYFLARMLGKALYENMLVEL 840
>DQ341187-1|ABC68221.1| 2129|Homo sapiens dedicator of cytokinesis 7
protein.
Length = 2129
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 1779 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 1819
>DQ118680-1|AAZ38452.1| 1990|Homo sapiens dedicator of cytokinesis 7
protein.
Length = 1990
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 1640 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 1680
>DQ118679-1|AAZ38451.1| 1992|Homo sapiens dedicator of cytokinesis 7
protein.
Length = 1992
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 1640 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 1680
>BC112387-1|AAI12388.1| 383|Homo sapiens DOCK7 protein protein.
Length = 383
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 33 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 73
>BC016392-1|AAH16392.1| 624|Homo sapiens DOCK7 protein protein.
Length = 624
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 274 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 314
>AL451044-2|CAI13105.1| 1302|Homo sapiens dedicator of cytokinesis 7
protein.
Length = 1302
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 950 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 990
>AL451044-1|CAI13104.1| 2109|Homo sapiens dedicator of cytokinesis 7
protein.
Length = 2109
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 1757 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 1797
>AL138847-2|CAI22995.1| 2109|Homo sapiens dedicator of cytokinesis 7
protein.
Length = 2109
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 1757 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 1797
>AK125049-1|BAC86032.1| 1520|Homo sapiens protein ( Homo sapiens cDNA
FLJ43059 fis, clone BRTHA3007769. ).
Length = 1520
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 1168 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 1208
>AK055905-1|BAB71042.1| 741|Homo sapiens protein ( Homo sapiens
cDNA FLJ31343 fis, clone MESAN1000101, weakly similar to
Rat trg gene product. ).
Length = 741
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 607 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 647
>AK055493-1|BAB70933.1| 626|Homo sapiens Apex nuclease. protein.
Length = 626
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 274 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 314
>AB051558-1|BAB21862.1| 1302|Homo sapiens KIAA1771 protein protein.
Length = 1302
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 199 AGSYEVCER--RVLIPVYGVHEVNRDVAQLRVVVASLQQTLSEV 74
AG YE +VLIP+ HE NRD +L + LQ+ S++
Sbjct: 950 AGMYEAVNEVYKVLIPI---HEANRDAKKLSTIHGKLQEAFSKI 990
>AC004975-1|AAD51453.1| 415|Homo sapiens unknown protein.
Length = 415
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 207 NMTPGATKSVNEGFLFPYMGSMKSIGMSPSFGL*SQVSSRPLAKSLYENCMSRL 46
N G K+ NEG L+P + +G SF R L K+LYEN + L
Sbjct: 118 NPNQGFFKTTNEGLLYPNPAAQMLVG--DSFARHYYFLGRMLGKALYENMLVEL 169
>BC112355-1|AAI12356.1| 699|Homo sapiens histidine-rich
calcium-binding protein, precursor protein.
Length = 699
Score = 30.3 bits (65), Expect = 3.9
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = -3
Query: 497 ASGRYHEPEAHAAQTLQQSQHDNEDDVPMILD---AEHRYHEDEHQRRLSAHHHELGDDV 327
+ G +H +H Q ++ D++DD D E+R+ HQ ++ D
Sbjct: 229 SDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDGH 288
Query: 326 REQDLSGRHSRH 291
+D S RH H
Sbjct: 289 HHRDPSHRHRSH 300
>M60052-1|AAA88071.1| 699|Homo sapiens histidine-rich calcium
binding protein protein.
Length = 699
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = -3
Query: 497 ASGRYHEPEAHAAQTLQQSQHDNEDDVPMILD----AEHRYHEDEHQRRLSAHHHELGDD 330
+ G +H +H Q ++ D++DD D E+R+ HQ ++ D
Sbjct: 228 SDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDG 287
Query: 329 VREQDLSGRHSRH 291
+D S RH H
Sbjct: 288 HHHRDPSHRHRSH 300
>DQ205685-1|ABA27099.1| 423|Homo sapiens mitochondrial ribosomal
protein L37 protein.
Length = 423
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 145 HEVNRDVAQLRVVV-ASLQQTLSEVPVRELYVPV 47
H N+D L V+ A L QT E+P RE Y PV
Sbjct: 146 HIENQDECVLNVISHARLWQTTEEIPKRETYCPV 179
>BC094691-1|AAH94691.1| 699|Homo sapiens histidine rich calcium
binding protein protein.
Length = 699
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = -3
Query: 497 ASGRYHEPEAHAAQTLQQSQHDNEDDVPMILD----AEHRYHEDEHQRRLSAHHHELGDD 330
+ G +H +H Q ++ D++DD D E+R+ HQ ++ D
Sbjct: 228 SDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDG 287
Query: 329 VREQDLSGRHSRH 291
+D S RH H
Sbjct: 288 HHHRDPSHRHRSH 300
>BC069802-1|AAH69802.1| 699|Homo sapiens histidine rich calcium
binding protein protein.
Length = 699
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = -3
Query: 497 ASGRYHEPEAHAAQTLQQSQHDNEDDVPMILD----AEHRYHEDEHQRRLSAHHHELGDD 330
+ G +H +H Q ++ D++DD D E+R+ HQ ++ D
Sbjct: 228 SDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDG 287
Query: 329 VREQDLSGRHSRH 291
+D S RH H
Sbjct: 288 HHHRDPSHRHRSH 300
>BC069795-1|AAH69795.1| 699|Homo sapiens histidine rich calcium
binding protein protein.
Length = 699
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = -3
Query: 497 ASGRYHEPEAHAAQTLQQSQHDNEDDVPMILD----AEHRYHEDEHQRRLSAHHHELGDD 330
+ G +H +H Q ++ D++DD D E+R+ HQ ++ D
Sbjct: 228 SDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDG 287
Query: 329 VREQDLSGRHSRH 291
+D S RH H
Sbjct: 288 HHHRDPSHRHRSH 300
>BC000041-1|AAH00041.1| 423|Homo sapiens mitochondrial ribosomal
protein L37 protein.
Length = 423
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 145 HEVNRDVAQLRVVV-ASLQQTLSEVPVRELYVPV 47
H N+D L V+ A L QT E+P RE Y PV
Sbjct: 146 HIENQDECVLNVISHARLWQTTEEIPKRETYCPV 179
>AY145132-1|AAN61516.1| 2517|Homo sapiens p53-associated parkin-like
cytoplasmic protein protein.
Length = 2517
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 362 LSAHHHELGDDVREQDLSGRHSRHPGSVQET-LHPSTSTLTM 240
L +HH LGD + Q+L RH G T P+T T+ M
Sbjct: 877 LLCNHHTLGDQIITQELRDTLFRHSGIAPRTEPMPTTRTILM 918
>AL357673-2|CAH73897.1| 423|Homo sapiens mitochondrial ribosomal
protein L37 protein.
Length = 423
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 145 HEVNRDVAQLRVVV-ASLQQTLSEVPVRELYVPV 47
H N+D L V+ A L QT E+P RE Y PV
Sbjct: 146 HIENQDECVLNVISHARLWQTTEEIPKRETYCPV 179
>AL161644-8|CAI23564.1| 423|Homo sapiens mitochondrial ribosomal
protein L37 protein.
Length = 423
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 145 HEVNRDVAQLRVVV-ASLQQTLSEVPVRELYVPV 47
H N+D L V+ A L QT E+P RE Y PV
Sbjct: 146 HIENQDECVLNVISHARLWQTTEEIPKRETYCPV 179
>AL133375-1|CAI20204.1| 2518|Homo sapiens RP3-330M21.2 protein.
Length = 2518
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 362 LSAHHHELGDDVREQDLSGRHSRHPGSVQET-LHPSTSTLTM 240
L +HH LGD + Q+L RH G T P+T T+ M
Sbjct: 877 LLCNHHTLGDQIITQELRDTLFRHSGIAPRTEPMPTTRTILM 918
>AJ318215-1|CAC85756.1| 2517|Homo sapiens putative E3 ubiquitin ligase
protein.
Length = 2517
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 362 LSAHHHELGDDVREQDLSGRHSRHPGSVQET-LHPSTSTLTM 240
L +HH LGD + Q+L RH G T P+T T+ M
Sbjct: 877 LLCNHHTLGDQIITQELRDTLFRHSGIAPRTEPMPTTRTILM 918
>AF325707-1|AAG52881.1| 423|Homo sapiens ribosomal protein L2
protein.
Length = 423
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 145 HEVNRDVAQLRVVV-ASLQQTLSEVPVRELYVPV 47
H N+D L V+ A L QT E+P RE Y PV
Sbjct: 146 HIENQDECVLNVISHARLWQTTEEIPKRETYCPV 179
>AB014608-1|BAA31683.3| 1753|Homo sapiens KIAA0708 protein.
Length = 1753
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 362 LSAHHHELGDDVREQDLSGRHSRHPGSVQET-LHPSTSTLTM 240
L +HH LGD + Q+L RH G T P+T T+ M
Sbjct: 113 LLCNHHTLGDQIITQELRDTLFRHSGIAPRTEPMPTTRTILM 154
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,594,010
Number of Sequences: 237096
Number of extensions: 1528651
Number of successful extensions: 4239
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4228
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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