Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0537.Seq
         (720 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D8B3FB Cluster: UPI0000D8B3FB related cluster; n...    33   5.4  
UniRef50_A7TL45 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_UPI0000D8B3FB Cluster: UPI0000D8B3FB related cluster; n=5;
           Murinae|Rep: UPI0000D8B3FB UniRef100 entry - Mus
           musculus
          Length = 728

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 372 RFLKGAFGAFENVFNEHGAWIFLIRFAGHGTDLTLALTGLV 494
           + L+  FG ++ + +EHG +  L + A   T LTLA+  L+
Sbjct: 94  QLLQITFGPYDTILSEHGQYSSLYQIASKDTSLTLAIVSLM 134


>UniRef50_A7TL45 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 360

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = -2

Query: 293 FRCR*KPSINSLNH*RTYSRNRTPAPPYVRTKPALYLSDTEILN 162
           ++C  K SI+SLN+   Y+ NR+P+P         +LS+ +++N
Sbjct: 60  YKCSIKDSIDSLNY---YNNNRSPSPSTTPISATAHLSNKKLIN 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,828,584
Number of Sequences: 1657284
Number of extensions: 14530131
Number of successful extensions: 35922
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 34692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35908
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)