Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0536.Seq
(722 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 148 7e-37
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 147 2e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 124 1e-29
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 107 2e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 79 8e-16
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 66 4e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 64 1e-11
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 60 2e-10
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.7
SPAC3G6.05 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1... 26 4.7
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 26 6.3
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 6.3
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 8.3
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 148 bits (359), Expect = 7e-37
Identities = 72/84 (85%), Positives = 79/84 (94%)
Frame = +3
Query: 3 ACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAK 182
ACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K
Sbjct: 264 ACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSK 323
Query: 183 MDKAQIHDIVLVGGSTRIPKVQKL 254
+DKA +++IVLVGGSTRIP+VQKL
Sbjct: 324 VDKASVNEIVLVGGSTRIPRVQKL 347
Score = 102 bits (244), Expect = 6e-23
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +1
Query: 508 QIGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 666
Q GVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILN
Sbjct: 433 QPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILN 485
Score = 74.9 bits (176), Expect = 1e-14
Identities = 54/162 (33%), Positives = 64/162 (39%)
Frame = +2
Query: 236 PQGAEALQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 415
P+ + + DFFNGKE KSINPDE +L GD SE+ QD GI
Sbjct: 342 PRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGI 401
Query: 416 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNKSEYSSKYLRVSVL*PKITTCSVNSS*PG 595
ETAGGVMT LIKRN YSDN+ + K G
Sbjct: 402 ETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSG 461
Query: 596 SHRRRVACLKLRXXXXXXXXXXXXXXAIEKSTNKENKITITN 721
++ A+EK T K KITITN
Sbjct: 462 IPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITN 503
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 147 bits (356), Expect = 2e-36
Identities = 70/84 (83%), Positives = 80/84 (95%)
Frame = +3
Query: 3 ACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAK 182
ACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K
Sbjct: 264 ACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSK 323
Query: 183 MDKAQIHDIVLVGGSTRIPKVQKL 254
+DK+ +++IVLVGGSTRIP++QKL
Sbjct: 324 IDKSSVNEIVLVGGSTRIPRIQKL 347
Score = 102 bits (244), Expect = 6e-23
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +1
Query: 508 QIGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 666
Q GVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILN
Sbjct: 433 QPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILN 485
Score = 73.3 bits (172), Expect = 3e-14
Identities = 54/162 (33%), Positives = 64/162 (39%)
Frame = +2
Query: 236 PQGAEALQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 415
P+ + + DFFNGKE KSINPDE IL GD SE+ QD GI
Sbjct: 342 PRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGI 401
Query: 416 ETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNKSEYSSKYLRVSVL*PKITTCSVNSS*PG 595
ETAGGVMT LIKRN Y+DN+ + K G
Sbjct: 402 ETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSG 461
Query: 596 SHRRRVACLKLRXXXXXXXXXXXXXXAIEKSTNKENKITITN 721
++ A+EK T K KITITN
Sbjct: 462 IPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITN 503
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 124 bits (299), Expect = 1e-29
Identities = 57/84 (67%), Positives = 72/84 (85%)
Frame = +3
Query: 3 ACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAK 182
ACERAKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K L+D+K
Sbjct: 268 ACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSK 327
Query: 183 MDKAQIHDIVLVGGSTRIPKVQKL 254
+ KA +HDIVLVGGSTRIPKVQ+L
Sbjct: 328 VPKADVHDIVLVGGSTRIPKVQRL 351
Score = 64.5 bits (150), Expect = 1e-11
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +1
Query: 508 QIGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIL 663
Q V V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL
Sbjct: 438 QTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGIL 489
Score = 40.3 bits (90), Expect = 3e-04
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +2
Query: 236 PQGAEALQDFFNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXG 412
P+ + DFF+G+ LNKSINPDE +L + S++ QD G
Sbjct: 346 PKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLG 405
Query: 413 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNKS 514
+ G V + RN +DN++
Sbjct: 406 VAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQT 439
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 107 bits (257), Expect = 2e-24
Identities = 50/95 (52%), Positives = 72/95 (75%)
Frame = +3
Query: 9 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 188
E+AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ +
Sbjct: 298 EKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLK 357
Query: 189 KAQIHDIVLVGGSTRIPKVQKLCKISLMERSSTNL 293
K++I DIVLVGGSTRIPKVQ+L + +++S +
Sbjct: 358 KSEIDDIVLVGGSTRIPKVQELLESFFGKKASKGI 392
Score = 94.7 bits (225), Expect = 1e-20
Identities = 41/49 (83%), Positives = 47/49 (95%)
Frame = +1
Query: 517 VLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIL 663
VLIQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L
Sbjct: 465 VLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVL 513
Score = 46.4 bits (105), Expect = 4e-06
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +2
Query: 236 PQGAEALQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 415
P+ E L+ FF GK+ +K INPDE +L G++ + + GI
Sbjct: 374 PKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGI 430
Query: 416 ETAGGVMTTLIKRN 457
ET GGVMT LI RN
Sbjct: 431 ETTGGVMTKLIGRN 444
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 78.6 bits (185), Expect = 8e-16
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +1
Query: 508 QIGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 666
Q V I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+N
Sbjct: 476 QTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIIN 528
Score = 58.8 bits (136), Expect = 7e-10
Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Frame = +3
Query: 3 ACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSL 170
A E+AK LSS ++ I + + I+RA+FE+L L R T++P +++L
Sbjct: 308 AAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVRRTIDPCKRAL 367
Query: 171 RDAKMDKAQIHDIVLVGGSTRIPKVQKLCKISLMER 278
+DA + ++I++++LVGG TR+P+V + K S+ +R
Sbjct: 368 KDANLQTSEINEVILVGGMTRMPRVVETVK-SIFKR 402
Score = 39.9 bits (89), Expect = 4e-04
Identities = 27/80 (33%), Positives = 35/80 (43%)
Frame = +2
Query: 218 GWLHSYPQGAEALQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXX 397
G + P+ E ++ F +E KS+NPDE +L G V+D
Sbjct: 384 GGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVT 438
Query: 398 XXXXGIETAGGVMTTLIKRN 457
GIET GGV T LI RN
Sbjct: 439 PLSLGIETLGGVFTRLINRN 458
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 66.5 bits (155), Expect = 4e-12
Identities = 31/79 (39%), Positives = 52/79 (65%)
Frame = +3
Query: 12 RAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 191
R K LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A +
Sbjct: 303 RVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTF 362
Query: 192 AQIHDIVLVGGSTRIPKVQ 248
++I+ I+L GG++RIP +Q
Sbjct: 363 SEINSIILFGGASRIPFIQ 381
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 64.5 bits (150), Expect = 1e-11
Identities = 31/92 (33%), Positives = 53/92 (57%)
Frame = +3
Query: 6 CERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM 185
CE KR LS+ T AS +DSL +GIDF++SI R R++ + + V +++ A M
Sbjct: 291 CEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANM 350
Query: 186 DKAQIHDIVLVGGSTRIPKVQKLCKISLMERS 281
+ I +++L GG++ PK+ L + E++
Sbjct: 351 EPFDISEVILAGGASNTPKLTSLMESIFPEQT 382
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 60.5 bits (140), Expect = 2e-10
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +3
Query: 3 ACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAK 182
A ER K+ LS++ A + ++ + ID + I R+ FEEL L P+EK+L A
Sbjct: 272 AVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAG 331
Query: 183 MDKAQIHDIVLVGGSTRIPKVQKL 254
+ K ++ I +VGG TR+P V+++
Sbjct: 332 IKKEDLYSIEMVGGCTRVPIVKEV 355
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 204 RGFEPYPSWHHGETSPLAP 148
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPAC3G6.05 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 206
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 304 VRVNRFVELLSIKEILQSFCTLGIRVEP 221
VR+N E+ SIK +LQ F T G + P
Sbjct: 55 VRLNTHPEIPSIKRVLQ-FVTFGFAISP 81
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 656 PLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 534
PLA MS TSI G G GG P + + + + +SPS
Sbjct: 81 PLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 6.3
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 63 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 221
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +1
Query: 130 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 219
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,822,816
Number of Sequences: 5004
Number of extensions: 56497
Number of successful extensions: 192
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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